BLASTX nr result

ID: Panax21_contig00004797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004797
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517701.1| WD-repeat protein, putative [Ricinus communi...   181   7e-44
ref|XP_002327405.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_002268265.1| PREDICTED: protein TOPLESS [Vitis vinifera] ...   174   5e-42
gb|AAN62336.1|AF506028_3 CTV.2 [Citrus trifoliata]                    173   1e-41
ref|XP_004165893.1| PREDICTED: LOW QUALITY PROTEIN: protein TOPL...   172   3e-41

>ref|XP_002517701.1| WD-repeat protein, putative [Ricinus communis]
            gi|223543333|gb|EEF44865.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 1115

 Score =  181 bits (458), Expect = 7e-44
 Identities = 95/133 (71%), Positives = 103/133 (77%), Gaps = 1/133 (0%)
 Frame = +3

Query: 3    PASPRIRFNKDGSLLAVSTNENGIKILANSDGLRLLRAFENLSYDASRGPETV-KPSINT 179
            PASPRIRFNKDGSLLAVS NENGIKILANSDG RLLR FENLSYDASR  E V KP IN 
Sbjct: 623  PASPRIRFNKDGSLLAVSANENGIKILANSDGHRLLRTFENLSYDASRASEAVTKPIINP 682

Query: 180  IXXXXXXXXXXXXXGPVDRVASAVAISGMNGETRNLGDIKPRITEESNEKSKIWKLIEVN 359
            I             G  DR AS V I GMNG+ RN+GD+KPRITEESN+KSKIWKL E+N
Sbjct: 683  ISAAAATSA-----GLADRTASVVTIPGMNGDARNMGDVKPRITEESNDKSKIWKLTEIN 737

Query: 360  EPSQCRSLKLPEN 398
            EP+QCRSL+LP+N
Sbjct: 738  EPTQCRSLRLPDN 750


>ref|XP_002327405.1| predicted protein [Populus trichocarpa] gi|222835959|gb|EEE74380.1|
            predicted protein [Populus trichocarpa]
          Length = 1172

 Score =  176 bits (445), Expect = 2e-42
 Identities = 90/132 (68%), Positives = 104/132 (78%)
 Frame = +3

Query: 3    PASPRIRFNKDGSLLAVSTNENGIKILANSDGLRLLRAFENLSYDASRGPETVKPSINTI 182
            PASPRIRFNK+G+LLAVS N+NGIKILANSDG+RLLR FENLSYDASR  E+  P++N I
Sbjct: 680  PASPRIRFNKEGTLLAVSANDNGIKILANSDGIRLLRTFENLSYDASRASES--PTVNPI 737

Query: 183  XXXXXXXXXXXXXGPVDRVASAVAISGMNGETRNLGDIKPRITEESNEKSKIWKLIEVNE 362
                         G  DR AS VA++GMNG+ RNLGD+KPRI EE N+KSKIWKL E+NE
Sbjct: 738  SAAAAAAATSS--GLADRGASVVAVAGMNGDARNLGDVKPRIAEELNDKSKIWKLTEINE 795

Query: 363  PSQCRSLKLPEN 398
            PSQCRSL+LPEN
Sbjct: 796  PSQCRSLRLPEN 807


>ref|XP_002268265.1| PREDICTED: protein TOPLESS [Vitis vinifera]
            gi|297743564|emb|CBI36431.3| unnamed protein product
            [Vitis vinifera]
          Length = 1138

 Score =  174 bits (442), Expect = 5e-42
 Identities = 91/133 (68%), Positives = 105/133 (78%), Gaps = 1/133 (0%)
 Frame = +3

Query: 3    PASPRIRFNKDGSLLAVSTNENGIKILANSDGLRLLRAFENLSYDASRGPETV-KPSINT 179
            PASPRIRFNKDG+LLAVS NEN IKILANSDGLRLLR F+NLSYDASR  E+V KP+IN+
Sbjct: 641  PASPRIRFNKDGTLLAVSANENSIKILANSDGLRLLRTFDNLSYDASRASESVTKPAINS 700

Query: 180  IXXXXXXXXXXXXXGPVDRVASAVAISGMNGETRNLGDIKPRITEESNEKSKIWKLIEVN 359
            I             G  DR AS VAI+GMNG+ RN+GD+KPR+ EE+N+KSKIWKL E+N
Sbjct: 701  I-SAAAAAAAATSAGLADRGASVVAIAGMNGDARNMGDVKPRLAEETNDKSKIWKLTEIN 759

Query: 360  EPSQCRSLKLPEN 398
            E SQCRSL+L EN
Sbjct: 760  ETSQCRSLRLQEN 772


>gb|AAN62336.1|AF506028_3 CTV.2 [Citrus trifoliata]
          Length = 1127

 Score =  173 bits (439), Expect = 1e-41
 Identities = 88/132 (66%), Positives = 103/132 (78%)
 Frame = +3

Query: 3    PASPRIRFNKDGSLLAVSTNENGIKILANSDGLRLLRAFENLSYDASRGPETVKPSINTI 182
            PASPRIRFNKDG LLAVSTN+NGIKILA SDG+RLLR FENL+YDASR  E  KP+I+ I
Sbjct: 633  PASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRTFENLAYDASRTSENSKPTISPI 692

Query: 183  XXXXXXXXXXXXXGPVDRVASAVAISGMNGETRNLGDIKPRITEESNEKSKIWKLIEVNE 362
                         G  DR AS V+I GMNG+ R+L D+KPRITEESN+KSK+WKL E++E
Sbjct: 693  --SAAAAAAATSAGLADRAASMVSIPGMNGDVRSLADVKPRITEESNDKSKVWKLTELSE 750

Query: 363  PSQCRSLKLPEN 398
            P+QCRSL+LPEN
Sbjct: 751  PNQCRSLRLPEN 762


>ref|XP_004165893.1| PREDICTED: LOW QUALITY PROTEIN: protein TOPLESS-like [Cucumis
            sativus]
          Length = 1139

 Score =  172 bits (435), Expect = 3e-41
 Identities = 88/133 (66%), Positives = 102/133 (76%), Gaps = 1/133 (0%)
 Frame = +3

Query: 3    PASPRIRFNKDGSLLAVSTNENGIKILANSDGLRLLRAFENLSYDASRGPET-VKPSINT 179
            PASPRIRFNKDG+LLAVS NENGIKILAN DG+RLLR FENLSYDA+R  E   KP+IN 
Sbjct: 641  PASPRIRFNKDGTLLAVSGNENGIKILANVDGIRLLRTFENLSYDAARTSEAGTKPTINP 700

Query: 180  IXXXXXXXXXXXXXGPVDRVASAVAISGMNGETRNLGDIKPRITEESNEKSKIWKLIEVN 359
            I                DR AS V +SG+ G++R+LGD+KPRI E+SN+KSKIWKL E+N
Sbjct: 701  ISAAAAVAAAAAAGSAADRGASVVTMSGVAGDSRSLGDVKPRIPEDSNDKSKIWKLTEIN 760

Query: 360  EPSQCRSLKLPEN 398
            EPSQCRSL+LPEN
Sbjct: 761  EPSQCRSLRLPEN 773


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