BLASTX nr result

ID: Panax21_contig00004788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004788
         (1108 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306582.1| predicted protein [Populus trichocarpa] gi|2...   518   e-150
ref|XP_002513896.1| Endoplasmic reticulum-Golgi intermediate com...   513   e-149
ref|XP_002285801.1| PREDICTED: endoplasmic reticulum-Golgi inter...   507   e-149
ref|XP_003544786.1| PREDICTED: endoplasmic reticulum-Golgi inter...   510   e-148
ref|XP_003542443.1| PREDICTED: endoplasmic reticulum-Golgi inter...   502   e-146

>ref|XP_002306582.1| predicted protein [Populus trichocarpa] gi|222856031|gb|EEE93578.1|
            predicted protein [Populus trichocarpa]
          Length = 386

 Score =  518 bits (1333), Expect(2) = e-150
 Identities = 239/299 (79%), Positives = 266/299 (88%)
 Frame = +2

Query: 212  LSGGVITLVSSVIMLLLFFSEFRLYLHTVTETKLVVDTSRGEKLHINFDVTFPAIPCSLL 391
            LSGGVITL SSV+M LLFFSE RLYLH VTETKLVVDTSRGE L INFDVTFPA+PCS+L
Sbjct: 26   LSGGVITLASSVVMFLLFFSELRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSIL 85

Query: 392  SLDAMDISGEQHLDIRHDINKKRIDFHGNVIEVRQEGIGAPTVEKPLQRHGGRLEHNETY 571
            SLDAMDISGEQHLD++HDI KKR+DFHGNVIE RQ+GIGAP +EKPLQRHGGRLEHNETY
Sbjct: 86   SLDAMDISGEQHLDVKHDIIKKRLDFHGNVIEARQDGIGAPKIEKPLQRHGGRLEHNETY 145

Query: 572  CGSCYGAETSDEDCCNSCEDVREAYRKKGWGVSNPDMIDQCKREGFLQRIKDEDGEGCNM 751
            CGSCYGAE SDEDCCNSCEDVREAYRKKGW V+NPD++DQCKREGFLQ+IKDE+GEGCN+
Sbjct: 146  CGSCYGAEASDEDCCNSCEDVREAYRKKGWAVTNPDLMDQCKREGFLQKIKDEEGEGCNI 205

Query: 752  YGFLEVNKVAGNFHFAPGKSFHLSNAHVLELLAFQMDFYNITHRINKLSFGKYYPGNVNP 931
            YGFLEVNKVAGNFHFAPGKSF  S  HV +LLAFQ D +NITH+IN+L+FG+Y+PG VNP
Sbjct: 206  YGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDSFNITHKINRLTFGEYFPGVVNP 265

Query: 932  LDGVNWVQGTQHGTYQYFLKVVSTIYTDIRGHTIQSNQFSATEHFKSAEFGQSQSHPGV 1108
            LDGV W Q T  G YQYF+KVV T+YTD+ GHTIQSNQFS TEHF+  + G+ QS PGV
Sbjct: 266  LDGVQWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHFRGTDIGRLQSLPGV 324



 Score = 41.2 bits (95), Expect(2) = e-150
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = +3

Query: 54  MDKVINRLRNLDAYPKINEDFYHST 128
           M+ ++++LRNLDAYPKINEDFY  T
Sbjct: 1   MEGLMSKLRNLDAYPKINEDFYSRT 25


>ref|XP_002513896.1| Endoplasmic reticulum-Golgi intermediate compartment protein,
            putative [Ricinus communis] gi|223546982|gb|EEF48479.1|
            Endoplasmic reticulum-Golgi intermediate compartment
            protein, putative [Ricinus communis]
          Length = 386

 Score =  513 bits (1320), Expect(2) = e-149
 Identities = 238/299 (79%), Positives = 266/299 (88%)
 Frame = +2

Query: 212  LSGGVITLVSSVIMLLLFFSEFRLYLHTVTETKLVVDTSRGEKLHINFDVTFPAIPCSLL 391
            LSGGVITL SS++MLLLF SE RLY+H VTETKL VDTSRGE L INFDVTFPA+PCS+L
Sbjct: 26   LSGGVITLASSILMLLLFISELRLYIHAVTETKLAVDTSRGETLRINFDVTFPALPCSIL 85

Query: 392  SLDAMDISGEQHLDIRHDINKKRIDFHGNVIEVRQEGIGAPTVEKPLQRHGGRLEHNETY 571
            SLDAMDISGEQHLD++HDI KKR+D HGNVIE RQ+GIGAP +E PLQRHGGRLEHNETY
Sbjct: 86   SLDAMDISGEQHLDVKHDIIKKRLDSHGNVIEARQDGIGAPKIENPLQRHGGRLEHNETY 145

Query: 572  CGSCYGAETSDEDCCNSCEDVREAYRKKGWGVSNPDMIDQCKREGFLQRIKDEDGEGCNM 751
            CGSCYGAE SDEDCCNSCEDVREAYRKKGW +SNPD+IDQCKREGFLQRIKDE+GEGCN+
Sbjct: 146  CGSCYGAEASDEDCCNSCEDVREAYRKKGWALSNPDLIDQCKREGFLQRIKDEEGEGCNI 205

Query: 752  YGFLEVNKVAGNFHFAPGKSFHLSNAHVLELLAFQMDFYNITHRINKLSFGKYYPGNVNP 931
            YGFLEVNKVAGNFHFAPGKSF  SN HV +LLAFQ D +NI+H+IN+L+FG Y+PG VNP
Sbjct: 206  YGFLEVNKVAGNFHFAPGKSFQQSNVHVHDLLAFQKDSFNISHKINRLAFGDYFPGVVNP 265

Query: 932  LDGVNWVQGTQHGTYQYFLKVVSTIYTDIRGHTIQSNQFSATEHFKSAEFGQSQSHPGV 1108
            LDGV+W Q T  G YQYF+KVV T+YTD+ G+TIQSNQFS TEHF+SAE G+ QS PGV
Sbjct: 266  LDGVHWTQETPSGMYQYFIKVVPTVYTDVSGYTIQSNQFSVTEHFRSAEAGRLQSLPGV 324



 Score = 43.9 bits (102), Expect(2) = e-149
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = +3

Query: 54  MDKVINRLRNLDAYPKINEDFYHST 128
           M+ ++N+LRNLDAYPKINEDFY  T
Sbjct: 1   MEGIMNKLRNLDAYPKINEDFYSRT 25


>ref|XP_002285801.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
            protein 3 [Vitis vinifera] gi|302141938|emb|CBI19141.3|
            unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  507 bits (1306), Expect(2) = e-149
 Identities = 234/299 (78%), Positives = 265/299 (88%)
 Frame = +2

Query: 212  LSGGVITLVSSVIMLLLFFSEFRLYLHTVTETKLVVDTSRGEKLHINFDVTFPAIPCSLL 391
            LSGGVITL SS+ MLLLF SE RLYLH VTETKLVVDTSRGE L INFDVTFPA+PCS+L
Sbjct: 26   LSGGVITLASSIFMLLLFISELRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSIL 85

Query: 392  SLDAMDISGEQHLDIRHDINKKRIDFHGNVIEVRQEGIGAPTVEKPLQRHGGRLEHNETY 571
            SLDAMDISGEQHLD+RHDI KKRID HG+VIE RQ+GIG+P +EKPLQ+HGGRLEHNETY
Sbjct: 86   SLDAMDISGEQHLDVRHDIIKKRIDAHGSVIEARQDGIGSPKIEKPLQKHGGRLEHNETY 145

Query: 572  CGSCYGAETSDEDCCNSCEDVREAYRKKGWGVSNPDMIDQCKREGFLQRIKDEDGEGCNM 751
            CGSCYGAE SD+DCCN+CE+VREAYRKKGW +SNPD+IDQCKREGFLQRIKDE+GEGCN+
Sbjct: 146  CGSCYGAEASDDDCCNNCEEVREAYRKKGWAMSNPDLIDQCKREGFLQRIKDEEGEGCNI 205

Query: 752  YGFLEVNKVAGNFHFAPGKSFHLSNAHVLELLAFQMDFYNITHRINKLSFGKYYPGNVNP 931
            YGFLEVNKVAGNFHFAPGKSF  SN HV +LLAFQ D +NI+H+IN+L+FG Y+PG VNP
Sbjct: 206  YGFLEVNKVAGNFHFAPGKSFQQSNIHVHDLLAFQKDSFNISHKINRLAFGDYFPGVVNP 265

Query: 932  LDGVNWVQGTQHGTYQYFLKVVSTIYTDIRGHTIQSNQFSATEHFKSAEFGQSQSHPGV 1108
            LDGV W+Q T  G YQYF+KVV T+YT + GHTI +NQFS TEHF++AE G+ QS PGV
Sbjct: 266  LDGVQWIQATPSGMYQYFIKVVPTVYTHVSGHTISTNQFSVTEHFRNAELGRLQSLPGV 324



 Score = 47.4 bits (111), Expect(2) = e-149
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = +3

Query: 54  MDKVINRLRNLDAYPKINEDFYHST 128
           MD +IN+LRNLDAYPKINEDFY  T
Sbjct: 1   MDNIINKLRNLDAYPKINEDFYSRT 25


>ref|XP_003544786.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
            protein 3-like [Glycine max]
          Length = 386

 Score =  510 bits (1313), Expect(2) = e-148
 Identities = 236/299 (78%), Positives = 265/299 (88%)
 Frame = +2

Query: 212  LSGGVITLVSSVIMLLLFFSEFRLYLHTVTETKLVVDTSRGEKLHINFDVTFPAIPCSLL 391
            LSGGVITL SS++MLLLFFSE RLYLH VTETKLVVDTSR E L INFDVTFPA+PCS+L
Sbjct: 26   LSGGVITLASSILMLLLFFSELRLYLHAVTETKLVVDTSRAETLRINFDVTFPALPCSIL 85

Query: 392  SLDAMDISGEQHLDIRHDINKKRIDFHGNVIEVRQEGIGAPTVEKPLQRHGGRLEHNETY 571
            SLDAMDISGEQHLD++HDI KKR+D HGNVIE RQEGIGAP +EKPLQRHGGRLEHNETY
Sbjct: 86   SLDAMDISGEQHLDVKHDIIKKRLDSHGNVIETRQEGIGAPKIEKPLQRHGGRLEHNETY 145

Query: 572  CGSCYGAETSDEDCCNSCEDVREAYRKKGWGVSNPDMIDQCKREGFLQRIKDEDGEGCNM 751
            CGSCYGAE SD+DCCNSCEDVREAYRKKGW +SNPD+IDQCKREGFLQRIKDE+GEGCN+
Sbjct: 146  CGSCYGAEESDDDCCNSCEDVREAYRKKGWALSNPDLIDQCKREGFLQRIKDEEGEGCNV 205

Query: 752  YGFLEVNKVAGNFHFAPGKSFHLSNAHVLELLAFQMDFYNITHRINKLSFGKYYPGNVNP 931
            YGFLEVNKVAGNFHFAPGKSF  S  HV +LLAFQ D +N++H IN+L+FG+Y+PG VNP
Sbjct: 206  YGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDSFNLSHHINRLAFGEYFPGVVNP 265

Query: 932  LDGVNWVQGTQHGTYQYFLKVVSTIYTDIRGHTIQSNQFSATEHFKSAEFGQSQSHPGV 1108
            LD V+W Q T  G YQYF+KVV T+YTD+ GHTIQSNQFS TEHF++ + G+ QS PGV
Sbjct: 266  LDNVHWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHFRTGDVGRLQSLPGV 324



 Score = 44.3 bits (103), Expect(2) = e-148
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = +3

Query: 54  MDKVINRLRNLDAYPKINEDFYHST 128
           MD ++++LRNLDAYPKINEDFY  T
Sbjct: 1   MDSIMSKLRNLDAYPKINEDFYSRT 25


>ref|XP_003542443.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
            protein 3-like [Glycine max]
          Length = 386

 Score =  502 bits (1293), Expect(2) = e-146
 Identities = 232/299 (77%), Positives = 263/299 (87%)
 Frame = +2

Query: 212  LSGGVITLVSSVIMLLLFFSEFRLYLHTVTETKLVVDTSRGEKLHINFDVTFPAIPCSLL 391
            LSGGVITL SS++MLLLF+SE RLYLH VTETKLVVDTSR E L INFDVTFPA+PCS+L
Sbjct: 26   LSGGVITLASSILMLLLFYSELRLYLHAVTETKLVVDTSRAETLRINFDVTFPALPCSIL 85

Query: 392  SLDAMDISGEQHLDIRHDINKKRIDFHGNVIEVRQEGIGAPTVEKPLQRHGGRLEHNETY 571
            SLDAMDISGEQ LD++HDI KKR+D  GNVIE RQEGIGAP +EKPLQRHGGRLEHNETY
Sbjct: 86   SLDAMDISGEQRLDVKHDIIKKRLDSRGNVIETRQEGIGAPKIEKPLQRHGGRLEHNETY 145

Query: 572  CGSCYGAETSDEDCCNSCEDVREAYRKKGWGVSNPDMIDQCKREGFLQRIKDEDGEGCNM 751
            CGSCYG+E SD+DCCNSCEDVREAYRKKGW +SNPD+IDQCKREGFLQRIKDE+GEGCN+
Sbjct: 146  CGSCYGSEVSDDDCCNSCEDVREAYRKKGWALSNPDLIDQCKREGFLQRIKDEEGEGCNV 205

Query: 752  YGFLEVNKVAGNFHFAPGKSFHLSNAHVLELLAFQMDFYNITHRINKLSFGKYYPGNVNP 931
            YGFLEVNKVAGNFHFAPGKSF  S  HV +LLAFQ D +N++H IN+L+FG+Y+PG VNP
Sbjct: 206  YGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDSFNLSHHINRLTFGEYFPGVVNP 265

Query: 932  LDGVNWVQGTQHGTYQYFLKVVSTIYTDIRGHTIQSNQFSATEHFKSAEFGQSQSHPGV 1108
            LD V+W Q T  G YQYF+KVV T+YTD+ GHTIQSNQFS TEHF++ + G+ QS PGV
Sbjct: 266  LDNVHWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHFRTGDMGRLQSLPGV 324



 Score = 43.9 bits (102), Expect(2) = e-146
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = +3

Query: 54  MDKVINRLRNLDAYPKINEDFYHST 128
           M+ +I++LRNLDAYPKINEDFY  T
Sbjct: 1   MESIISKLRNLDAYPKINEDFYSRT 25


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