BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004785
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34367.3| unnamed protein product [Vitis vinifera]              313   7e-83
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...   313   7e-83
ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, pa...   312   9e-83
ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cu...   312   9e-83
gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabido...   307   3e-81

>emb|CBI34367.3| unnamed protein product [Vitis vinifera]
          Length = 850

 Score =  313 bits (801), Expect = 7e-83
 Identities = 165/218 (75%), Positives = 165/218 (75%)
 Frame = -3

Query: 1186 RCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVL 1007
            RCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVL
Sbjct: 327  RCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVL 386

Query: 1006 PCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERF 827
            PCGAGKSLVGVSAA RIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERF
Sbjct: 387  PCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERF 446

Query: 826  RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRNREWG 647
            R                                                    IRNREWG
Sbjct: 447  R-----------------------GNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWG 483

Query: 646  LLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 533
            LLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED
Sbjct: 484  LLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 521



 Score =  258 bits (660), Expect = 2e-66
 Identities = 127/132 (96%), Positives = 130/132 (98%)
 Frame = -2

Query: 398 AEVWCPMTKEFFAEYLRKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 219
           AEVWCPMTKEFFAEYL+KENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 555 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 614

Query: 218 FALTEYAMKLRKPMIYGATSHVERMKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 39
           FALTEYAMKLRKPMIYGATSHVER KILEAFKT +DVNT+FLSKVGDNSIDIPEANVIIQ
Sbjct: 615 FALTEYAMKLRKPMIYGATSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDIPEANVIIQ 674

Query: 38  ISSHAGSRRQEA 3
           ISSHAGSRRQEA
Sbjct: 675 ISSHAGSRRQEA 686


>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score =  313 bits (801), Expect = 7e-83
 Identities = 165/218 (75%), Positives = 165/218 (75%)
 Frame = -3

Query: 1186 RCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVL 1007
            RCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVL
Sbjct: 248  RCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVL 307

Query: 1006 PCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERF 827
            PCGAGKSLVGVSAA RIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERF
Sbjct: 308  PCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERF 367

Query: 826  RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRNREWG 647
            R                                                    IRNREWG
Sbjct: 368  R-----------------------GNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWG 404

Query: 646  LLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 533
            LLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED
Sbjct: 405  LLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 442



 Score =  258 bits (660), Expect = 2e-66
 Identities = 127/132 (96%), Positives = 130/132 (98%)
 Frame = -2

Query: 398 AEVWCPMTKEFFAEYLRKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 219
           AEVWCPMTKEFFAEYL+KENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 476 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 535

Query: 218 FALTEYAMKLRKPMIYGATSHVERMKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 39
           FALTEYAMKLRKPMIYGATSHVER KILEAFKT +DVNT+FLSKVGDNSIDIPEANVIIQ
Sbjct: 536 FALTEYAMKLRKPMIYGATSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDIPEANVIIQ 595

Query: 38  ISSHAGSRRQEA 3
           ISSHAGSRRQEA
Sbjct: 596 ISSHAGSRRQEA 607


>ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, partial [Cucumis sativus]
          Length = 725

 Score =  312 bits (800), Expect = 9e-83
 Identities = 163/218 (74%), Positives = 166/218 (76%)
 Frame = -3

Query: 1186 RCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVL 1007
            RCLPNALNYPMLEEYDFRNDT+NPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVL
Sbjct: 203  RCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVL 262

Query: 1006 PCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERF 827
            PCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRD+QICRFTSDSKERF
Sbjct: 263  PCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERF 322

Query: 826  RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRNREWG 647
            R                                                    IRNREWG
Sbjct: 323  R-----------------------GNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWG 359

Query: 646  LLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 533
            LLLMDEVHVVPAHMFRKVIS+TKSHCKLGLTATLVRED
Sbjct: 360  LLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVRED 397



 Score =  261 bits (668), Expect = 2e-67
 Identities = 129/132 (97%), Positives = 131/132 (99%)
 Frame = -2

Query: 398 AEVWCPMTKEFFAEYLRKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 219
           AEVWCPMTKEFFAEYL+KENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 431 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 490

Query: 218 FALTEYAMKLRKPMIYGATSHVERMKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 39
           FALTEYAMKLRKPMIYGATSH+ER KILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 491 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 550

Query: 38  ISSHAGSRRQEA 3
           ISSHAGSRRQEA
Sbjct: 551 ISSHAGSRRQEA 562


>ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cucumis sativus]
          Length = 768

 Score =  312 bits (800), Expect = 9e-83
 Identities = 163/218 (74%), Positives = 166/218 (76%)
 Frame = -3

Query: 1186 RCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVL 1007
            RCLPNALNYPMLEEYDFRNDT+NPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVL
Sbjct: 246  RCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVL 305

Query: 1006 PCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERF 827
            PCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRD+QICRFTSDSKERF
Sbjct: 306  PCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERF 365

Query: 826  RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRNREWG 647
            R                                                    IRNREWG
Sbjct: 366  R-----------------------GNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWG 402

Query: 646  LLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 533
            LLLMDEVHVVPAHMFRKVIS+TKSHCKLGLTATLVRED
Sbjct: 403  LLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVRED 440



 Score =  261 bits (668), Expect = 2e-67
 Identities = 129/132 (97%), Positives = 131/132 (99%)
 Frame = -2

Query: 398 AEVWCPMTKEFFAEYLRKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 219
           AEVWCPMTKEFFAEYL+KENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 474 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 533

Query: 218 FALTEYAMKLRKPMIYGATSHVERMKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 39
           FALTEYAMKLRKPMIYGATSH+ER KILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 534 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 593

Query: 38  ISSHAGSRRQEA 3
           ISSHAGSRRQEA
Sbjct: 594 ISSHAGSRRQEA 605


>gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabidopsis thaliana]
          Length = 767

 Score =  307 bits (787), Expect = 3e-81
 Identities = 160/218 (73%), Positives = 164/218 (75%)
 Frame = -3

Query: 1186 RCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVL 1007
            RCLPNALNYPMLEEYDFRND VNPDLDMELKP AQPRPYQEKSLSKMFGNGRARSGIIVL
Sbjct: 247  RCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVL 306

Query: 1006 PCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERF 827
            PCGAGKSLVGVSAA+RI+KSCLCLATNAVSVDQWAFQFKLWSTIRD+QICRFTSDSKERF
Sbjct: 307  PCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERF 366

Query: 826  RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRNREWG 647
            R                                                    +RNREWG
Sbjct: 367  R-----------------------GNAGVVVTTYNMVAFGGKRSEESEKIIEEMRNREWG 403

Query: 646  LLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 533
            LLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED
Sbjct: 404  LLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 441



 Score =  260 bits (665), Expect = 4e-67
 Identities = 128/132 (96%), Positives = 131/132 (99%)
 Frame = -2

Query: 398 AEVWCPMTKEFFAEYLRKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 219
           AEVWCPMTKEFFAEYL+KENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL
Sbjct: 475 AEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNL 534

Query: 218 FALTEYAMKLRKPMIYGATSHVERMKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQ 39
           FALTEYAMKLRKPMIYGATSH+ER KILEAFKTS+DVNTVFLSKVGDNSIDIPEANVIIQ
Sbjct: 535 FALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQ 594

Query: 38  ISSHAGSRRQEA 3
           ISSHAGSRRQEA
Sbjct: 595 ISSHAGSRRQEA 606