BLASTX nr result

ID: Panax21_contig00004779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004779
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279451.1| PREDICTED: ATP-dependent Clp protease proteo...   522   e-146
ref|XP_002512428.1| ATP-dependent Clp protease proteolytic subun...   513   e-143
ref|XP_003554645.1| PREDICTED: ATP-dependent Clp protease proteo...   509   e-142
ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycin...   505   e-141
ref|XP_002319519.1| predicted protein [Populus trichocarpa] gi|1...   502   e-140

>ref|XP_002279451.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 3, chloroplastic [Vitis vinifera]
            gi|296089701|emb|CBI39520.3| unnamed protein product
            [Vitis vinifera]
          Length = 322

 Score =  522 bits (1345), Expect = e-146
 Identities = 261/323 (80%), Positives = 284/323 (87%)
 Frame = +1

Query: 52   MATSLQLPMAXXXXXXXXXXXXXLKRHNFKPYCAVNTRNSAKIPIPPVNPNDPFLSKLAS 231
            MA SLQLPMA               R  FK +C++    SAKIP+ P+NP DPFLSKLAS
Sbjct: 1    MAASLQLPMASSIPSSSSPSTT---RPIFKTHCSMKPTCSAKIPMSPINPKDPFLSKLAS 57

Query: 232  VAATSPEKLLNRPANSDMPPYLDIFESPQLMATPAQVERSVSYNEHRPRKPPPDLPSLLL 411
            VAATSPE+LL RP+ SD  P+LD+F+SP+LMATPAQVERSVSYNEHRPR+PPPDLPSLLL
Sbjct: 58   VAATSPERLLQRPSGSDSLPFLDLFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLL 117

Query: 412  HGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGETVGMETEGFA 591
            HGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEP+Y+YIN TGTTRDDGE VGMETEGFA
Sbjct: 118  HGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPVYVYINCTGTTRDDGERVGMETEGFA 177

Query: 592  IYDALMQLKNEIHTVAVGAAIGQACLLLASGTKGKRFMMPHSKAMIQQPRVPSSGLMPAS 771
            IYDA+MQLKNEIHTVAVGAAIGQACLLLA+GTKGKRFMMPH+KAMIQQPRVPSSGLMPAS
Sbjct: 178  IYDAMMQLKNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPRVPSSGLMPAS 237

Query: 772  DVLIRAKEVVINRDTLVNLLAKHTGNSIEAVADVMRRPFYMDSTRAKEFGVIDKILWRGQ 951
            DVLIRAKEV+ NRDTLV LLAKHTGNS E V+ VMRRP+YMDST+AKEFGVIDKILWRGQ
Sbjct: 238  DVLIRAKEVITNRDTLVKLLAKHTGNSEETVSTVMRRPYYMDSTKAKEFGVIDKILWRGQ 297

Query: 952  EKIMADAAPPEEWDKNAGIKVLD 1020
            EKIMAD   PEEWDKNAGI+V+D
Sbjct: 298  EKIMADVLSPEEWDKNAGIQVVD 320


>ref|XP_002512428.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
            communis] gi|223548389|gb|EEF49880.1| ATP-dependent Clp
            protease proteolytic subunit, putative [Ricinus communis]
          Length = 325

 Score =  513 bits (1320), Expect = e-143
 Identities = 251/302 (83%), Positives = 273/302 (90%)
 Frame = +1

Query: 121  LKRHNFKPYCAVNTRNSAKIPIPPVNPNDPFLSKLASVAATSPEKLLNRPANSDMPPYLD 300
            LKR N +  C+     S+KIP+PP+NP DPFLSKLAS+AA SP+ LL+RP  SD PP+LD
Sbjct: 29   LKRRNLRINCS-----SSKIPMPPINPKDPFLSKLASIAANSPDSLLDRPITSDTPPFLD 83

Query: 301  IFESPQLMATPAQVERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAEL 480
            +F+SP+LMATPAQVERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELV+AEL
Sbjct: 84   LFDSPKLMATPAQVERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAEL 143

Query: 481  MYLQWMDPKEPIYLYINSTGTTRDDGETVGMETEGFAIYDALMQLKNEIHTVAVGAAIGQ 660
            MYLQWMDPKEPIYLYINSTGTTRDDGETVGMETEGFAIYD++MQLKNEIHTVAVGAAIGQ
Sbjct: 144  MYLQWMDPKEPIYLYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQ 203

Query: 661  ACLLLASGTKGKRFMMPHSKAMIQQPRVPSSGLMPASDVLIRAKEVVINRDTLVNLLAKH 840
            ACLLLA+GTKGKRFMMPH+KAMIQQP+VPSSGLM ASDVLIRAKE V NRDTLV LLAKH
Sbjct: 204  ACLLLAAGTKGKRFMMPHAKAMIQQPKVPSSGLMAASDVLIRAKEAVTNRDTLVELLAKH 263

Query: 841  TGNSIEAVADVMRRPFYMDSTRAKEFGVIDKILWRGQEKIMADAAPPEEWDKNAGIKVLD 1020
            T NS+E VA+ M+RPFYMDS RAKEFGVIDKILWRGQEKIMAD   PEEWDK AGIK+ D
Sbjct: 264  TENSVETVANAMKRPFYMDSRRAKEFGVIDKILWRGQEKIMADVVTPEEWDKMAGIKIAD 323

Query: 1021 AF 1026
             F
Sbjct: 324  PF 325


>ref|XP_003554645.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 3, chloroplastic-like [Glycine max]
          Length = 327

 Score =  509 bits (1310), Expect = e-142
 Identities = 247/298 (82%), Positives = 275/298 (92%)
 Frame = +1

Query: 133  NFKPYCAVNTRNSAKIPIPPVNPNDPFLSKLASVAATSPEKLLNRPANSDMPPYLDIFES 312
            N K  C+VN     KIP+PP+NP DPFLSKLASVAA+SPE LLN P NSD  PYLDIF+S
Sbjct: 33   NLKTSCSVNR---PKIPMPPLNPKDPFLSKLASVAASSPETLLNTPKNSDTLPYLDIFDS 89

Query: 313  PQLMATPAQVERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQ 492
            P+LMATPAQVERSVSYNEHRPR+PPPDLPSLLLHGRIVYIGMPLVPAVTELV+AELMYLQ
Sbjct: 90   PKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 149

Query: 493  WMDPKEPIYLYINSTGTTRDDGETVGMETEGFAIYDALMQLKNEIHTVAVGAAIGQACLL 672
            +MDPKEPIY+YINSTGTTRDDGETVGMETEGFAIYDA+MQLKNEIHTVAVG+AIGQACLL
Sbjct: 150  YMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDAMMQLKNEIHTVAVGSAIGQACLL 209

Query: 673  LASGTKGKRFMMPHSKAMIQQPRVPSSGLMPASDVLIRAKEVVINRDTLVNLLAKHTGNS 852
            L++G+ GKRFMMPH+KAMIQQPR+PSSGLMPASDVLIRAKEV+INRD LV LLAKHTGNS
Sbjct: 210  LSAGSPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRDNLVKLLAKHTGNS 269

Query: 853  IEAVADVMRRPFYMDSTRAKEFGVIDKILWRGQEKIMADAAPPEEWDKNAGIKVLDAF 1026
             E VA+VM+RP+YMD+TRAKEFGVID+ILWRGQEK+MAD A P++WDK AGIK++D F
Sbjct: 270  EETVANVMKRPYYMDATRAKEFGVIDRILWRGQEKVMADVASPDDWDKGAGIKIVDGF 327


>ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycine max]
            gi|255635968|gb|ACU18330.1| unknown [Glycine max]
          Length = 324

 Score =  505 bits (1300), Expect = e-141
 Identities = 244/301 (81%), Positives = 277/301 (92%)
 Frame = +1

Query: 124  KRHNFKPYCAVNTRNSAKIPIPPVNPNDPFLSKLASVAATSPEKLLNRPANSDMPPYLDI 303
            K  N K  C+VN   +AKIP+PP+NP DPFLSKLAS+AA+SP+ LLN P NSD PP+LDI
Sbjct: 27   KCRNLKTSCSVN---AAKIPMPPLNPKDPFLSKLASIAASSPDTLLNTPKNSDTPPFLDI 83

Query: 304  FESPQLMATPAQVERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELM 483
            F+SP+LMATPAQVERSVSYNEHRPR+PPPDLPSLLLHGRIVYIGMPLVPAVTELV+AELM
Sbjct: 84   FDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELM 143

Query: 484  YLQWMDPKEPIYLYINSTGTTRDDGETVGMETEGFAIYDALMQLKNEIHTVAVGAAIGQA 663
             LQ+MDPKE I++YINSTGTTRDDGETVGMETEGFAIYDA+MQLKNEIHTVAVG+AIGQA
Sbjct: 144  CLQYMDPKETIFIYINSTGTTRDDGETVGMETEGFAIYDAMMQLKNEIHTVAVGSAIGQA 203

Query: 664  CLLLASGTKGKRFMMPHSKAMIQQPRVPSSGLMPASDVLIRAKEVVINRDTLVNLLAKHT 843
            CLLL++GT GKRFMMPH+KAMIQQPR+PSSGLMPASDVLIRAKEV+INRD LV LLAKHT
Sbjct: 204  CLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRDNLVKLLAKHT 263

Query: 844  GNSIEAVADVMRRPFYMDSTRAKEFGVIDKILWRGQEKIMADAAPPEEWDKNAGIKVLDA 1023
            GNS E VA+VM+RP+YMD+TRAKEFGVID+ILWRG+EK+MAD A P++WDK AGIK++D 
Sbjct: 264  GNSEETVANVMKRPYYMDATRAKEFGVIDRILWRGREKVMADVASPDDWDKGAGIKIVDG 323

Query: 1024 F 1026
            F
Sbjct: 324  F 324


>ref|XP_002319519.1| predicted protein [Populus trichocarpa] gi|118486796|gb|ABK95233.1|
            unknown [Populus trichocarpa] gi|222857895|gb|EEE95442.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  502 bits (1292), Expect = e-140
 Identities = 250/328 (76%), Positives = 277/328 (84%), Gaps = 5/328 (1%)
 Frame = +1

Query: 58   TSLQLPMAXXXXXXXXXXXXXLKRHNFKPYCAVNTRNSAK---IPIPPVNPNDPFLSKLA 228
            T+  LP +             +     K + ++N RNS+    IP+PP+NP DPFLSKLA
Sbjct: 14   TTCSLPSSTLYSKSIKLKPNTIDNLRIKCFASINARNSSSSSNIPMPPINPKDPFLSKLA 73

Query: 229  SVAATSPEKLLNRP--ANSDMPPYLDIFESPQLMATPAQVERSVSYNEHRPRKPPPDLPS 402
            S+AATSP+ LL     + SD PPYLDIFESP+LMATPAQVERSVSYNEHRPR PPPDLPS
Sbjct: 74   SIAATSPDSLLQDSPVSGSDTPPYLDIFESPKLMATPAQVERSVSYNEHRPRTPPPDLPS 133

Query: 403  LLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGETVGMETE 582
            LLLHGRIVYIGMPLV AVTELV+AELMYLQWMDPK PIY+YINSTGTTRDDGE+VGMETE
Sbjct: 134  LLLHGRIVYIGMPLVAAVTELVVAELMYLQWMDPKAPIYIYINSTGTTRDDGESVGMETE 193

Query: 583  GFAIYDALMQLKNEIHTVAVGAAIGQACLLLASGTKGKRFMMPHSKAMIQQPRVPSSGLM 762
            GFAIYD++MQLKNEIHTVAVGAAIGQACLLLA+GTKG R+MMPH+KAMIQQPRVPSSGLM
Sbjct: 194  GFAIYDSMMQLKNEIHTVAVGAAIGQACLLLAAGTKGHRYMMPHAKAMIQQPRVPSSGLM 253

Query: 763  PASDVLIRAKEVVINRDTLVNLLAKHTGNSIEAVADVMRRPFYMDSTRAKEFGVIDKILW 942
            PASDVLIRAKE VINRD L  LLAKHTGNS+E VA+VM+RPFYMDS RAKEFGVIDKILW
Sbjct: 254  PASDVLIRAKEAVINRDVLTELLAKHTGNSVETVANVMKRPFYMDSRRAKEFGVIDKILW 313

Query: 943  RGQEKIMADAAPPEEWDKNAGIKVLDAF 1026
            +GQEKIMAD  PPE+WDK+AGIKV D F
Sbjct: 314  QGQEKIMADVLPPEDWDKSAGIKVADPF 341


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