BLASTX nr result

ID: Panax21_contig00004772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004772
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 ...    93   3e-17
ref|XP_002522770.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_002891861.1| zinc ion binding protein [Arabidopsis lyrata...    90   2e-16
gb|AAF79318.1|AC002304_11 F14J16.17 [Arabidopsis thaliana]             90   2e-16
ref|NP_564704.2| zinc ion binding protein [Arabidopsis thaliana]...    90   2e-16

>ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 [Vitis vinifera]
           gi|296089891|emb|CBI39710.3| unnamed protein product
           [Vitis vinifera]
          Length = 366

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 39/55 (70%), Positives = 44/55 (80%)
 Frame = -2

Query: 445 CCTLKPRGVKDKYKFWSCKFCTLENGVKLEKCKACGQWRYSHGAPVAAPAPNIGT 281
           C T KP+ V  KYK WSCKFCTLEN V+L+KC ACGQWRYSHG PV+  APN+GT
Sbjct: 312 CSTEKPKDVGIKYKVWSCKFCTLENNVELDKCGACGQWRYSHGPPVSTRAPNLGT 366


>ref|XP_002522770.1| conserved hypothetical protein [Ricinus communis]
           gi|223538008|gb|EEF39621.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 404

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 37/55 (67%), Positives = 42/55 (76%)
 Frame = -2

Query: 445 CCTLKPRGVKDKYKFWSCKFCTLENGVKLEKCKACGQWRYSHGAPVAAPAPNIGT 281
           C T KP+    KYK WSCKFCTLEN VKL+KC AC +WRYS+G PV+ PAPN GT
Sbjct: 350 CSTEKPKDASAKYKIWSCKFCTLENSVKLDKCSACSEWRYSYGPPVSTPAPNHGT 404


>ref|XP_002891861.1| zinc ion binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337703|gb|EFH68120.1| zinc ion binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 401

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 37/55 (67%), Positives = 45/55 (81%)
 Frame = -2

Query: 445 CCTLKPRGVKDKYKFWSCKFCTLENGVKLEKCKACGQWRYSHGAPVAAPAPNIGT 281
           C   KP+  + K+K WSCKFCTLEN VKLEKC+ACGQWRYS+GAP++  APN+GT
Sbjct: 347 CTATKPKEKEMKHKVWSCKFCTLENEVKLEKCEACGQWRYSYGAPLSTGAPNVGT 401


>gb|AAF79318.1|AC002304_11 F14J16.17 [Arabidopsis thaliana]
          Length = 450

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 37/55 (67%), Positives = 45/55 (81%)
 Frame = -2

Query: 445 CCTLKPRGVKDKYKFWSCKFCTLENGVKLEKCKACGQWRYSHGAPVAAPAPNIGT 281
           C   KP+  + K+K WSCKFCTLEN VKLEKC+ACGQWRYS+GAP++  APN+GT
Sbjct: 396 CTAAKPKEREMKHKVWSCKFCTLENEVKLEKCEACGQWRYSYGAPLSTGAPNVGT 450


>ref|NP_564704.2| zinc ion binding protein [Arabidopsis thaliana]
           gi|110738098|dbj|BAF00982.1| hypothetical protein
           [Arabidopsis thaliana] gi|119935912|gb|ABM06032.1|
           At1g55915 [Arabidopsis thaliana]
           gi|332195198|gb|AEE33319.1| zinc ion binding protein
           [Arabidopsis thaliana]
          Length = 404

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 37/55 (67%), Positives = 45/55 (81%)
 Frame = -2

Query: 445 CCTLKPRGVKDKYKFWSCKFCTLENGVKLEKCKACGQWRYSHGAPVAAPAPNIGT 281
           C   KP+  + K+K WSCKFCTLEN VKLEKC+ACGQWRYS+GAP++  APN+GT
Sbjct: 350 CTAAKPKEREMKHKVWSCKFCTLENEVKLEKCEACGQWRYSYGAPLSTGAPNVGT 404


Top