BLASTX nr result
ID: Panax21_contig00004766
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00004766
(1770 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 436 e-120
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 432 e-118
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 431 e-118
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 423 e-116
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 423 e-116
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 436 bits (1122), Expect = e-120
Identities = 237/572 (41%), Positives = 335/572 (58%), Gaps = 3/572 (0%)
Frame = -2
Query: 1766 WLKDGDGNNAFFHNQIKNMWNQNKILSIENESGDLCFGQLEIQKIVVSHFSSLLGSSPQD 1587
W+ GDGNN++FH + +N I I + + EI+ F+ L D
Sbjct: 662 WMNVGDGNNSYFHKAAQVRKMRNSIREIRGPNAETLQTSEEIKGEAERFFNEFLNRQSGD 721
Query: 1586 GTPCLL-DLAPSIANTVTSQQASFLERDITDAEVLSILKSMKKNKSPGPDGFNVNFFLLT 1410
+ DL ++ + + L R++T E+ +L +M NKSPGPDG+ FF T
Sbjct: 722 FHGISVEDLRNLMSYRCSVTDQNILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKAT 781
Query: 1409 WDIVGPVFTATIQSFFRQGCLLRGTNATAIAPIPKTANPSSMNDYKPISCCNTTYKCISK 1230
W + GP F A IQSFF +G L +G NAT +A IPK M DY+PISCCN YK ISK
Sbjct: 782 WSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISK 841
Query: 1229 IIASRLVGILPSIISPNQAAFIKGRRIGDNILLAQELFRNYHRPFGPPRCAIKINLRKAF 1050
I+A+RL +LPS I NQ+AF+K R + +N+LLA EL ++YH+ PRCA+KI++ KAF
Sbjct: 842 ILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAF 901
Query: 1049 DSISWNFLMAALPSFNFPPKFLFWVKACITSTTFSVKVNG-VCGYFKGYKGLR*GDPLSP 873
DS+ W FL+ L + NFP F W+K CI++ TFSV+VNG + G+F +GLR G LSP
Sbjct: 902 DSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSP 961
Query: 872 YLFVIIMEVFSLMLSKASKLPSFHYHWKTVAISLTHLCFADDLIIFYRGDIGSVSTLKLC 693
YLFVI M V S M+ +A+ + YH K I LTHLCFADDL++F G S+ +
Sbjct: 962 YLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINV 1021
Query: 692 LDQFSSQSGLLINASKSMCFLSHVPPDTSDDILSSLGF*LGSFPAKFLGVPLITTKLSLA 513
+F+ +SGL I+ KS +L+ V LSS F G P ++LG+PL+T +++ A
Sbjct: 1022 FKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTA 1081
Query: 512 DYQPLLEKIKSRISSCTNRFLSYVGRLQLIKSVIHSIQAYWSAHFILPASAINDMKSSMS 333
DY PL+E +K++ISS T R LSY GRL L+ SVI SI +W + + LPA I +++ S
Sbjct: 1082 DYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCS 1141
Query: 332 RFL*KGPSMGKFGAKVAWSKISLPFAEEGLAIKNLEDWKKAQIMMHLWQIITPSSSSYWA 153
FL GP + AK+AWS I P E GL IK+L + K + +W++++ + S W
Sbjct: 1142 AFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLS-TQPSLWV 1200
Query: 152 KWVRVVHLKNKFFWILPIPLDC-SWIWRKVLK 60
W+ ++ FW SW+W+K+LK
Sbjct: 1201 TWIWTFIIRKGTFWSANERSSLGSWMWKKLLK 1232
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 432 bits (1110), Expect = e-118
Identities = 234/561 (41%), Positives = 332/561 (59%), Gaps = 3/561 (0%)
Frame = -2
Query: 1733 FHNQIKNMWNQNKILSIENESGDLCFGQLEIQKIVVSHFSSLLGSSPQDGTPC-LLDLAP 1557
FH + +N I I G + G +I F L P+D + +L
Sbjct: 24 FHRAVIERETKNMIKEIYCTDGRVVQGD-DIMVEAEKFFKEFLQLIPEDFVGVEVRELQD 82
Query: 1556 SIANTVTSQQASFLERDITDAEVLSILKSMKKNKSPGPDGFNVNFFLLTWDIVGPVFTAT 1377
+ T+ L R+++ E+ ++L SM K+KSPGPDG+ F+ TWDI+G FT
Sbjct: 83 LLQFRCTNSDNEMLTREVSSEEIKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLP 142
Query: 1376 IQSFFRQGCLLRGTNATAIAPIPKTANPSSMNDYKPISCCNTTYKCISKIIASRLVGILP 1197
+QSFF++G L +G N+ +A IPK M DY+PISCCN YK ISKIIA+RL +LP
Sbjct: 143 VQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVLYKVISKIIANRLKLLLP 202
Query: 1196 SIISPNQAAFIKGRRIGDNILLAQELFRNYHRPFGPPRCAIKINLRKAFDSISWNFLMAA 1017
I+ NQ+AF+K R + +N+LLA EL ++YH+ RCAIKI++ KAFDS+ W+FL
Sbjct: 203 RFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTNT 262
Query: 1016 LPSFNFPPKFLFWVKACITSTTFSVKVNG-VCGYFKGYKGLR*GDPLSPYLFVIIMEVFS 840
L + NF P F+ W+ CIT+ +FSV+VNG + GYF+ +GLR G LSPYLFVI M+V S
Sbjct: 263 LVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLS 322
Query: 839 LMLSKASKLPSFHYHWKTVAISLTHLCFADDLIIFYRGDIGSVSTLKLCLDQFSSQSGLL 660
ML KA+ + F +H K + LTHL FADDL++ G S+ + D+F +SGL
Sbjct: 323 KMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLR 382
Query: 659 INASKSMCFLSHVPPDTSDDILSSLGF*LGSFPAKFLGVPLITTKLSLADYQPLLEKIKS 480
I+ KS +++ V P +I + F +G P ++LG+PL+T +L+ ADY PLLE+IK
Sbjct: 383 ISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKK 442
Query: 479 RISSCTNRFLSYVGRLQLIKSVIHSIQAYWSAHFILPASAINDMKSSMSRFL*KGPSMGK 300
RI++ T RF S+ GR LIKSV+ SI +W A F LP I ++ S FL G M
Sbjct: 443 RIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSS 502
Query: 299 FGAKVAWSKISLPFAEEGLAIKNLEDWKKAQIMMHLWQIITPSSSSYWAKWVRVVHLKNK 120
AK++W + P AE GL ++NL++ + +W+II+ +S+S W KWV ++ K
Sbjct: 503 HKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIIS-NSNSLWTKWVAEYLIRKK 561
Query: 119 FFWILPIPLDC-SWIWRKVLK 60
W L SWIWRK+LK
Sbjct: 562 SIWSLKQSTSMGSWIWRKILK 582
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 431 bits (1108), Expect = e-118
Identities = 230/568 (40%), Positives = 335/568 (58%), Gaps = 3/568 (0%)
Frame = -2
Query: 1754 GDGNNAFFHNQIKNMWNQNKILSIENESGDLCFGQLEIQKIVVSHFSSLLGSSPQDGTP- 1578
GD NN FH I N I I G + Q +IQ V++F L + P D
Sbjct: 90 GDRNNKTFHRAITTREAVNSIREIVTRDGLVVTSQQDIQTEAVNYFQDFLQTIPADYEGM 149
Query: 1577 CLLDLAPSIANTVTSQQASFLERDITDAEVLSILKSMKKNKSPGPDGFNVNFFLLTWDIV 1398
C+ +L + + L R +T E+ ++ SM K+KSPGPDG+ F+ +W+I+
Sbjct: 150 CVEELENLLPFRCSEDDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEII 209
Query: 1397 GPVFTATIQSFFRQGCLLRGTNATAIAPIPKTANPSSMNDYKPISCCNTTYKCISKIIAS 1218
G IQSFF +G L +G N+T +A IPK + DY+PISCCN YK ISKI+A+
Sbjct: 210 GDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILAN 269
Query: 1217 RLVGILPSIISPNQAAFIKGRRIGDNILLAQELFRNYHRPFGPPRCAIKINLRKAFDSIS 1038
RL ILP I NQ+AF+K R + +N+LLA EL ++YH+ RCA+KI++ KAFDS+
Sbjct: 270 RLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQ 329
Query: 1037 WNFLMAALPSFNFPPKFLFWVKACITSTTFSVKVNG-VCGYFKGYKGLR*GDPLSPYLFV 861
W+FL L + NFP +F+ W+ C+++ +FS++VNG + GYF+ +GLR G LSPYLFV
Sbjct: 330 WSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFV 389
Query: 860 IIMEVFSLMLSKASKLPSFHYHWKTVAISLTHLCFADDLIIFYRGDIGSVSTLKLCLDQF 681
I M+V S ML KA+ F YH + + LTHLCFADDL+I G I SV + L+QF
Sbjct: 390 ISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQF 449
Query: 680 SSQSGLLINASKSMCFLSHVPPDTSDDILSSLGF*LGSFPAKFLGVPLITTKLSLADYQP 501
+++ GL I K+ +L+ V + + S F +G P ++LG+PL+T +L+ +DY P
Sbjct: 450 AAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSP 509
Query: 500 LLEKIKSRISSCTNRFLSYVGRLQLIKSVIHSIQAYWSAHFILPASAINDMKSSMSRFL* 321
L+++I+ RI T+R+LS+ GRL LI SV+ SI +W F LP IN++ S L
Sbjct: 510 LIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISSALLW 569
Query: 320 KGPSMGKFGAKVAWSKISLPFAEEGLAIKNLEDWKKAQIMMHLWQIITPSSSSYWAKWVR 141
GP + AKV+W +I P E GL +++L + K + +W++++ S W KW R
Sbjct: 570 SGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLS-CQDSLWVKWTR 628
Query: 140 VVHLKNKFFWILPIPLDC-SWIWRKVLK 60
+ LK + FW + SWIWR++LK
Sbjct: 629 MNLLKKESFWSIGTHSTLGSWIWRRLLK 656
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 423 bits (1087), Expect = e-116
Identities = 224/570 (39%), Positives = 340/570 (59%), Gaps = 2/570 (0%)
Frame = -2
Query: 1766 WLKDGDGNNAFFHNQIKNMWNQNKILSIENESGDLCFGQLEIQKIVVSHFSSLLGSSPQD 1587
W +GD N +FH + + + N I S+ + +G L Q I V+++ LLGS
Sbjct: 220 WFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESP 279
Query: 1586 GTPCLLDLAPSIANTVTSQQASFLERDITDAEVLSILKSMKKNKSPGPDGFNVNFFLLTW 1407
+ D+ + + Q S LE+ TD E+ + KS+ +NK+ GPDG++V FF TW
Sbjct: 280 FSMEQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTW 339
Query: 1406 DIVGPVFTATIQSFFRQGCLLRGTNATAIAPIPKTANPSSMNDYKPISCCNTTYKCISKI 1227
I+GP A I FF G LL+ NAT + IPKT+N ++++++PISC NT YK ISK+
Sbjct: 340 SIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKL 399
Query: 1226 IASRLVGILPSIISPNQAAFIKGRRIGDNILLAQELFRNYHRPFGPPRCAIKINLRKAFD 1047
+ SRL G+L ++I +Q+AF+ GR + +N+LLA E+ Y+R PR +K++L+KAFD
Sbjct: 400 LTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFD 459
Query: 1046 SISWNFLMAALPSFNFPPKFLFWVKACITSTTFSVKVNGVC-GYFKGYKGLR*GDPLSPY 870
S+ W F+ AAL + P +++ W+ CIT+ +F++ VNG G+F+ KGLR GDPLSPY
Sbjct: 460 SVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPY 519
Query: 869 LFVIIMEVFSLMLSKASKLPSFHYHWKTVAISLTHLCFADDLIIFYRGDIGSVSTLKLCL 690
LFV+ MEVFS +L HYH K +S++HL FADD++IF+ G S+ + L
Sbjct: 520 LFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETL 579
Query: 689 DQFSSQSGLLINASKSMCFLSHVPPDTSDDILS-SLGF*LGSFPAKFLGVPLITTKLSLA 513
D F+ SGL +N KS F + + D S+ I S + GF G+FP ++LG+PL+ KL +A
Sbjct: 580 DDFADWSGLKVNKDKSQLFQAGL--DLSERITSAAYGFPAGTFPIRYLGLPLMCRKLRIA 637
Query: 512 DYQPLLEKIKSRISSCTNRFLSYVGRLQLIKSVIHSIQAYWSAHFILPASAINDMKSSMS 333
DY PLLEK+ +R+ S ++ LS+ GR QLI SVI + +W + F+LP I ++S S
Sbjct: 638 DYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCS 697
Query: 332 RFL*KGPSMGKFGAKVAWSKISLPFAEEGLAIKNLEDWKKAQIMMHLWQIITPSSSSYWA 153
+FL G G+ +KV+W LP +E GL ++ +W K ++ +W ++ +S WA
Sbjct: 698 KFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIW-VLFDRDTSLWA 756
Query: 152 KWVRVVHLKNKFFWILPIPLDCSWIWRKVL 63
+W R L + FW + W W+ +L
Sbjct: 757 QWQRHHRLGHASFWQVNALQTDPWTWKMLL 786
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 423 bits (1087), Expect = e-116
Identities = 224/570 (39%), Positives = 340/570 (59%), Gaps = 2/570 (0%)
Frame = -2
Query: 1766 WLKDGDGNNAFFHNQIKNMWNQNKILSIENESGDLCFGQLEIQKIVVSHFSSLLGSSPQD 1587
W +GD N +FH + + + N I S+ + +G L Q I V+++ LLGS
Sbjct: 220 WFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESP 279
Query: 1586 GTPCLLDLAPSIANTVTSQQASFLERDITDAEVLSILKSMKKNKSPGPDGFNVNFFLLTW 1407
+ D+ + + Q S LE+ TD E+ + KS+ +NK+ GPDG++V FF TW
Sbjct: 280 FSMEQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTW 339
Query: 1406 DIVGPVFTATIQSFFRQGCLLRGTNATAIAPIPKTANPSSMNDYKPISCCNTTYKCISKI 1227
I+GP A I FF G LL+ NAT + IPKT+N ++++++PISC NT YK ISK+
Sbjct: 340 SIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKL 399
Query: 1226 IASRLVGILPSIISPNQAAFIKGRRIGDNILLAQELFRNYHRPFGPPRCAIKINLRKAFD 1047
+ SRL G+L ++I +Q+AF+ GR + +N+LLA E+ Y+R PR +K++L+KAFD
Sbjct: 400 LTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFD 459
Query: 1046 SISWNFLMAALPSFNFPPKFLFWVKACITSTTFSVKVNGVC-GYFKGYKGLR*GDPLSPY 870
S+ W F+ AAL + P +++ W+ CIT+ +F++ VNG G+F+ KGLR GDPLSPY
Sbjct: 460 SVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPY 519
Query: 869 LFVIIMEVFSLMLSKASKLPSFHYHWKTVAISLTHLCFADDLIIFYRGDIGSVSTLKLCL 690
LFV+ MEVFS +L HYH K +S++HL FADD++IF+ G S+ + L
Sbjct: 520 LFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETL 579
Query: 689 DQFSSQSGLLINASKSMCFLSHVPPDTSDDILS-SLGF*LGSFPAKFLGVPLITTKLSLA 513
D F+ SGL +N KS F + + D S+ I S + GF G+FP ++LG+PL+ KL +A
Sbjct: 580 DDFADWSGLKVNKDKSQLFQAGL--DLSERITSAAYGFPAGTFPIRYLGLPLMCRKLRIA 637
Query: 512 DYQPLLEKIKSRISSCTNRFLSYVGRLQLIKSVIHSIQAYWSAHFILPASAINDMKSSMS 333
DY PLLEK+ +R+ S ++ LS+ GR QLI SVI + +W + F+LP I ++S S
Sbjct: 638 DYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCS 697
Query: 332 RFL*KGPSMGKFGAKVAWSKISLPFAEEGLAIKNLEDWKKAQIMMHLWQIITPSSSSYWA 153
+FL G G+ +KV+W LP +E GL ++ +W K ++ +W ++ +S WA
Sbjct: 698 KFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIW-VLFDRDTSLWA 756
Query: 152 KWVRVVHLKNKFFWILPIPLDCSWIWRKVL 63
+W R L + FW + W W+ +L
Sbjct: 757 QWQRHHRLGHASFWQVNALQTDPWTWKMLL 786