BLASTX nr result
ID: Panax21_contig00004762
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00004762 (598 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor ... 104 4e-24 ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor ... 104 4e-24 ref|XP_002316931.1| predicted protein [Populus trichocarpa] gi|2... 100 2e-23 ref|XP_002330426.1| predicted protein [Populus trichocarpa] gi|2... 103 5e-23 ref|XP_002531044.1| Stromal membrane-associated protein, putativ... 101 5e-22 >ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5-like isoform 2 [Vitis vinifera] gi|302143074|emb|CBI20369.3| unnamed protein product [Vitis vinifera] Length = 478 Score = 104 bits (259), Expect(2) = 4e-24 Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 1/86 (1%) Frame = -2 Query: 597 MLAQQQSFLMAAA-KSAGGMPKFCGNAQQSGSNGANVPSLNWHNVGYQIPGMMMPVAGKG 421 MLAQQQS LMAAA KS G PKF NAQQ SNG ++P+ NW N+GYQIPGMMM AG Sbjct: 342 MLAQQQSLLMAAAAKSTGVAPKFSINAQQHSSNGTDLPTQNWPNMGYQIPGMMMQAAGNN 401 Query: 420 ELEKVMQMGNMGATFPVGNFVPLPAS 343 +++K MQ NMG T P GN VP S Sbjct: 402 DMQKFMQAANMGPTHPAGNSVPFATS 427 Score = 32.7 bits (73), Expect(2) = 4e-24 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = -1 Query: 232 TQTGKDFDFSSLTQGGMFSK 173 TQ GK++DFSSLTQ GMFSK Sbjct: 459 TQPGKEYDFSSLTQ-GMFSK 477 >ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5-like isoform 1 [Vitis vinifera] Length = 475 Score = 104 bits (259), Expect(2) = 4e-24 Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 1/86 (1%) Frame = -2 Query: 597 MLAQQQSFLMAAA-KSAGGMPKFCGNAQQSGSNGANVPSLNWHNVGYQIPGMMMPVAGKG 421 MLAQQQS LMAAA KS G PKF NAQQ SNG ++P+ NW N+GYQIPGMMM AG Sbjct: 339 MLAQQQSLLMAAAAKSTGVAPKFSINAQQHSSNGTDLPTQNWPNMGYQIPGMMMQAAGNN 398 Query: 420 ELEKVMQMGNMGATFPVGNFVPLPAS 343 +++K MQ NMG T P GN VP S Sbjct: 399 DMQKFMQAANMGPTHPAGNSVPFATS 424 Score = 32.7 bits (73), Expect(2) = 4e-24 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = -1 Query: 232 TQTGKDFDFSSLTQGGMFSK 173 TQ GK++DFSSLTQ GMFSK Sbjct: 456 TQPGKEYDFSSLTQ-GMFSK 474 >ref|XP_002316931.1| predicted protein [Populus trichocarpa] gi|222859996|gb|EEE97543.1| predicted protein [Populus trichocarpa] Length = 492 Score = 99.8 bits (247), Expect(2) = 2e-23 Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 15/102 (14%) Frame = -2 Query: 597 MLAQQQSFLMAAA-KSAGGMPK-------FCGNAQQSGSNGANVPSLNWHNVGYQIPGMM 442 MLAQQQ LMAAA KSAGG PK G+ QQ G NG N+P+ NW N+GYQIPG+M Sbjct: 340 MLAQQQQLLMAAAAKSAGGDPKSVGGDLKLSGSIQQQGPNGINIPAQNWPNMGYQIPGLM 399 Query: 441 MPVAGKGELEKVM-------QMGNMGATFPVGNFVPLPASRY 337 MPVAG+G+L+K+M Q+GN+G T P G+ + P S + Sbjct: 400 MPVAGQGDLQKLMQVHIMELQIGNIGLTHPGGSAIQYPPSSF 441 Score = 34.7 bits (78), Expect(2) = 2e-23 Identities = 17/19 (89%), Positives = 18/19 (94%) Frame = -1 Query: 229 QTGKDFDFSSLTQGGMFSK 173 QTGKD+DFSSLTQ GMFSK Sbjct: 475 QTGKDYDFSSLTQ-GMFSK 492 >ref|XP_002330426.1| predicted protein [Populus trichocarpa] gi|222871811|gb|EEF08942.1| predicted protein [Populus trichocarpa] Length = 478 Score = 103 bits (256), Expect(2) = 5e-23 Identities = 53/94 (56%), Positives = 66/94 (70%), Gaps = 4/94 (4%) Frame = -2 Query: 597 MLAQQQSFLMAAAKSA----GGMPKFCGNAQQSGSNGANVPSLNWHNVGYQIPGMMMPVA 430 MLAQQQ + AAAKSA GG K G+ QQ G NG ++P+ NW N+GYQIPG+MMPVA Sbjct: 337 MLAQQQLLMAAAAKSAAKSAGGDQKLSGSIQQQGPNGISIPAQNWPNIGYQIPGLMMPVA 396 Query: 429 GKGELEKVMQMGNMGATFPVGNFVPLPASRYSLY 328 G+G+L+K+ Q +MG T P G+ VP P S SLY Sbjct: 397 GQGDLQKIKQTADMGLTHPGGSSVPYPTS--SLY 428 Score = 30.0 bits (66), Expect(2) = 5e-23 Identities = 15/20 (75%), Positives = 16/20 (80%) Frame = -1 Query: 232 TQTGKDFDFSSLTQGGMFSK 173 T GKD+DFSSL Q GMFSK Sbjct: 459 TPAGKDYDFSSLMQ-GMFSK 477 >ref|XP_002531044.1| Stromal membrane-associated protein, putative [Ricinus communis] gi|223529372|gb|EEF31337.1| Stromal membrane-associated protein, putative [Ricinus communis] Length = 482 Score = 101 bits (252), Expect(2) = 5e-22 Identities = 52/89 (58%), Positives = 66/89 (74%), Gaps = 2/89 (2%) Frame = -2 Query: 597 MLAQQQSFLMAAAKSAGGM-PKFCGNAQQSGSNGANVPSLNWHNVGYQIPGMMMPVA-GK 424 MLAQQQS LMAAA +G M PKF G QQ+GSNG N+P+ NW N+GYQIPG++MPVA G+ Sbjct: 343 MLAQQQSLLMAAAAKSGVMDPKFPGGIQQAGSNGINLPAQNWPNLGYQIPGLVMPVAGGQ 402 Query: 423 GELEKVMQMGNMGATFPVGNFVPLPASRY 337 G+ K++Q GN G + PV + VP P S + Sbjct: 403 GDPRKLIQTGNTGLSNPVASSVPYPTSSF 431 Score = 28.1 bits (61), Expect(2) = 5e-22 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -1 Query: 232 TQTGKDFDFSSLTQGGMFSK 173 +Q+ KD+DFS+LTQ G FSK Sbjct: 463 SQSAKDYDFSALTQ-GFFSK 481