BLASTX nr result

ID: Panax21_contig00004762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004762
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor ...   104   4e-24
ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor ...   104   4e-24
ref|XP_002316931.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-23
ref|XP_002330426.1| predicted protein [Populus trichocarpa] gi|2...   103   5e-23
ref|XP_002531044.1| Stromal membrane-associated protein, putativ...   101   5e-22

>ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD5-like isoform 2 [Vitis vinifera]
           gi|302143074|emb|CBI20369.3| unnamed protein product
           [Vitis vinifera]
          Length = 478

 Score =  104 bits (259), Expect(2) = 4e-24
 Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
 Frame = -2

Query: 597 MLAQQQSFLMAAA-KSAGGMPKFCGNAQQSGSNGANVPSLNWHNVGYQIPGMMMPVAGKG 421
           MLAQQQS LMAAA KS G  PKF  NAQQ  SNG ++P+ NW N+GYQIPGMMM  AG  
Sbjct: 342 MLAQQQSLLMAAAAKSTGVAPKFSINAQQHSSNGTDLPTQNWPNMGYQIPGMMMQAAGNN 401

Query: 420 ELEKVMQMGNMGATFPVGNFVPLPAS 343
           +++K MQ  NMG T P GN VP   S
Sbjct: 402 DMQKFMQAANMGPTHPAGNSVPFATS 427



 Score = 32.7 bits (73), Expect(2) = 4e-24
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = -1

Query: 232 TQTGKDFDFSSLTQGGMFSK 173
           TQ GK++DFSSLTQ GMFSK
Sbjct: 459 TQPGKEYDFSSLTQ-GMFSK 477


>ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD5-like isoform 1 [Vitis vinifera]
          Length = 475

 Score =  104 bits (259), Expect(2) = 4e-24
 Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
 Frame = -2

Query: 597 MLAQQQSFLMAAA-KSAGGMPKFCGNAQQSGSNGANVPSLNWHNVGYQIPGMMMPVAGKG 421
           MLAQQQS LMAAA KS G  PKF  NAQQ  SNG ++P+ NW N+GYQIPGMMM  AG  
Sbjct: 339 MLAQQQSLLMAAAAKSTGVAPKFSINAQQHSSNGTDLPTQNWPNMGYQIPGMMMQAAGNN 398

Query: 420 ELEKVMQMGNMGATFPVGNFVPLPAS 343
           +++K MQ  NMG T P GN VP   S
Sbjct: 399 DMQKFMQAANMGPTHPAGNSVPFATS 424



 Score = 32.7 bits (73), Expect(2) = 4e-24
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = -1

Query: 232 TQTGKDFDFSSLTQGGMFSK 173
           TQ GK++DFSSLTQ GMFSK
Sbjct: 456 TQPGKEYDFSSLTQ-GMFSK 474


>ref|XP_002316931.1| predicted protein [Populus trichocarpa] gi|222859996|gb|EEE97543.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score = 99.8 bits (247), Expect(2) = 2e-23
 Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 15/102 (14%)
 Frame = -2

Query: 597 MLAQQQSFLMAAA-KSAGGMPK-------FCGNAQQSGSNGANVPSLNWHNVGYQIPGMM 442
           MLAQQQ  LMAAA KSAGG PK         G+ QQ G NG N+P+ NW N+GYQIPG+M
Sbjct: 340 MLAQQQQLLMAAAAKSAGGDPKSVGGDLKLSGSIQQQGPNGINIPAQNWPNMGYQIPGLM 399

Query: 441 MPVAGKGELEKVM-------QMGNMGATFPVGNFVPLPASRY 337
           MPVAG+G+L+K+M       Q+GN+G T P G+ +  P S +
Sbjct: 400 MPVAGQGDLQKLMQVHIMELQIGNIGLTHPGGSAIQYPPSSF 441



 Score = 34.7 bits (78), Expect(2) = 2e-23
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = -1

Query: 229 QTGKDFDFSSLTQGGMFSK 173
           QTGKD+DFSSLTQ GMFSK
Sbjct: 475 QTGKDYDFSSLTQ-GMFSK 492


>ref|XP_002330426.1| predicted protein [Populus trichocarpa] gi|222871811|gb|EEF08942.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  103 bits (256), Expect(2) = 5e-23
 Identities = 53/94 (56%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
 Frame = -2

Query: 597 MLAQQQSFLMAAAKSA----GGMPKFCGNAQQSGSNGANVPSLNWHNVGYQIPGMMMPVA 430
           MLAQQQ  + AAAKSA    GG  K  G+ QQ G NG ++P+ NW N+GYQIPG+MMPVA
Sbjct: 337 MLAQQQLLMAAAAKSAAKSAGGDQKLSGSIQQQGPNGISIPAQNWPNIGYQIPGLMMPVA 396

Query: 429 GKGELEKVMQMGNMGATFPVGNFVPLPASRYSLY 328
           G+G+L+K+ Q  +MG T P G+ VP P S  SLY
Sbjct: 397 GQGDLQKIKQTADMGLTHPGGSSVPYPTS--SLY 428



 Score = 30.0 bits (66), Expect(2) = 5e-23
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = -1

Query: 232 TQTGKDFDFSSLTQGGMFSK 173
           T  GKD+DFSSL Q GMFSK
Sbjct: 459 TPAGKDYDFSSLMQ-GMFSK 477


>ref|XP_002531044.1| Stromal membrane-associated protein, putative [Ricinus communis]
           gi|223529372|gb|EEF31337.1| Stromal membrane-associated
           protein, putative [Ricinus communis]
          Length = 482

 Score =  101 bits (252), Expect(2) = 5e-22
 Identities = 52/89 (58%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
 Frame = -2

Query: 597 MLAQQQSFLMAAAKSAGGM-PKFCGNAQQSGSNGANVPSLNWHNVGYQIPGMMMPVA-GK 424
           MLAQQQS LMAAA  +G M PKF G  QQ+GSNG N+P+ NW N+GYQIPG++MPVA G+
Sbjct: 343 MLAQQQSLLMAAAAKSGVMDPKFPGGIQQAGSNGINLPAQNWPNLGYQIPGLVMPVAGGQ 402

Query: 423 GELEKVMQMGNMGATFPVGNFVPLPASRY 337
           G+  K++Q GN G + PV + VP P S +
Sbjct: 403 GDPRKLIQTGNTGLSNPVASSVPYPTSSF 431



 Score = 28.1 bits (61), Expect(2) = 5e-22
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = -1

Query: 232 TQTGKDFDFSSLTQGGMFSK 173
           +Q+ KD+DFS+LTQ G FSK
Sbjct: 463 SQSAKDYDFSALTQ-GFFSK 481


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