BLASTX nr result

ID: Panax21_contig00004739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004739
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               148   5e-34
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     147   7e-34
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                144   7e-33
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...   144   7e-33
emb|CAN70849.1| hypothetical protein VITISV_039359 [Vitis vinifera]   140   1e-31

>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  148 bits (373), Expect = 5e-34
 Identities = 75/159 (47%), Positives = 100/159 (62%)
 Frame = +1

Query: 4    PVYYVSHVLRDAETRYPNIEKFAFALITASRKLRQYFQGRLVIVYTDQPLKKIMGKPEVS 183
            PVY+VS VL DAETRY  +EK AFAL+  +R++R YFQ   VIV T+ P+ KI+ KP+++
Sbjct: 1223 PVYFVSRVLHDAETRYQMVEKVAFALVITARRMRMYFQNHKVIVRTNYPIMKILTKPDLA 1282

Query: 184  GRLAAWTMELSQFFIEYHPRTAIKGQALADFVVECSFSEADEVVAEAEGSDRAVAVLQQK 363
            GR+  W +ELS+F IEY PR AIK QALADF  E +                    L ++
Sbjct: 1283 GRMIGWAVELSEFHIEYQPRGAIKSQALADFTAELT------------------PYLTER 1324

Query: 364  ESSWTLYADGSSTADVSGAGIILTSPEGFKVQQAIRFQF 480
               WTLY DGSS +  SGAG++L  P    V+QA++F+F
Sbjct: 1325 TPRWTLYVDGSSNSRSSGAGVVLEGPGEIVVEQAMKFEF 1363


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  147 bits (372), Expect = 7e-34
 Identities = 75/160 (46%), Positives = 99/160 (61%)
 Frame = +1

Query: 1    HPVYYVSHVLRDAETRYPNIEKFAFALITASRKLRQYFQGRLVIVYTDQPLKKIMGKPEV 180
            HP+Y++SH L  AET YP IEK AFA++ A+RKL+ YF    V V TDQPL+K +   E 
Sbjct: 631  HPIYFISHTLLAAETNYPLIEKAAFAVVVAARKLKPYFNAHPVTVLTDQPLEKALENFEK 690

Query: 181  SGRLAAWTMELSQFFIEYHPRTAIKGQALADFVVECSFSEADEVVAEAEGSDRAVAVLQQ 360
            SGRL  W +ELS F I+Y PR +IKGQALADF+ EC++ E                  + 
Sbjct: 691  SGRLIKWAVELSGFGIQYKPRPSIKGQALADFLAECTYQE------------------EP 732

Query: 361  KESSWTLYADGSSTADVSGAGIILTSPEGFKVQQAIRFQF 480
                W +Y DGSST + SGAGI++ SP G + + A++F F
Sbjct: 733  NPGVWEVYTDGSSTTNSSGAGILIISPNGDEFEYALKFTF 772


>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score =  144 bits (363), Expect = 7e-33
 Identities = 75/158 (47%), Positives = 100/158 (63%)
 Frame = +1

Query: 4   PVYYVSHVLRDAETRYPNIEKFAFALITASRKLRQYFQGRLVIVYTDQPLKKIMGKPEVS 183
           P+Y+VSHVL +AE RYP +EK + A++ A+RKLR YF    + V ++ PL+K + K + S
Sbjct: 91  PIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSNHPLEKALQKLDTS 150

Query: 184 GRLAAWTMELSQFFIEYHPRTAIKGQALADFVVECSFSEADEVVAEAEGSDRAVAVLQQK 363
           GRL  W +ELS+F +EY PRTAIK QALADF+VE S+ E +E V                
Sbjct: 151 GRLLRWAVELSEFEVEYKPRTAIKAQALADFIVEASYEEEEEPV---------------- 194

Query: 364 ESSWTLYADGSSTADVSGAGIILTSPEGFKVQQAIRFQ 477
              W L  DGS+    SGAGII+TSPEG   + AI+F+
Sbjct: 195 -GVWKLAVDGSAAQTGSGAGIIMTSPEGNVFEYAIKFK 231


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435157|ref|YP_004222375.1| hypothetical protein
           BevumaM_p142 [Beta vulgaris subsp. maritima]
           gi|346683249|ref|YP_004842181.1| hypothetical protein
           BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
           orf764 [Beta vulgaris subsp. vulgaris]
           gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977907|emb|CBL54131.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score =  144 bits (363), Expect = 7e-33
 Identities = 75/158 (47%), Positives = 100/158 (63%)
 Frame = +1

Query: 4   PVYYVSHVLRDAETRYPNIEKFAFALITASRKLRQYFQGRLVIVYTDQPLKKIMGKPEVS 183
           P+Y+VSHVL +AE RYP +EK + A++ A+RKLR YF    + V ++ PL+K + K + S
Sbjct: 91  PIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSNHPLEKALQKLDTS 150

Query: 184 GRLAAWTMELSQFFIEYHPRTAIKGQALADFVVECSFSEADEVVAEAEGSDRAVAVLQQK 363
           GRL  W +ELS+F +EY PRTAIK QALADF+VE S+ E +E V                
Sbjct: 151 GRLLRWAVELSEFEVEYKPRTAIKAQALADFIVEASYEEEEEPV---------------- 194

Query: 364 ESSWTLYADGSSTADVSGAGIILTSPEGFKVQQAIRFQ 477
              W L  DGS+    SGAGII+TSPEG   + AI+F+
Sbjct: 195 -GVWKLAVDGSAAQTGSGAGIIMTSPEGNVFEYAIKFK 231


>emb|CAN70849.1| hypothetical protein VITISV_039359 [Vitis vinifera]
          Length = 993

 Score =  140 bits (352), Expect = 1e-31
 Identities = 73/159 (45%), Positives = 101/159 (63%)
 Frame = +1

Query: 4   PVYYVSHVLRDAETRYPNIEKFAFALITASRKLRQYFQGRLVIVYTDQPLKKIMGKPEVS 183
           P+YYVS  L D ETRY  +E  A AL +A++KLR YFQ  LVIV TDQPL+ I+ KP+++
Sbjct: 327 PIYYVSRALADVETRYLKMELTALALRSAAQKLRSYFQAHLVIVLTDQPLRNILHKPDLT 386

Query: 184 GRLAAWTMELSQFFIEYHPRTAIKGQALADFVVECSFSEADEVVAEAEGSDRAVAVLQQK 363
           GR+  W +ELS+F IE+ PR ++KGQ +ADFV+E S   +    ++             K
Sbjct: 387 GRMLQWAIELSEFGIEFQPRLSMKGQVMADFVLEYSRRPSQHHESD-------------K 433

Query: 364 ESSWTLYADGSSTADVSGAGIILTSPEGFKVQQAIRFQF 480
           +  WTL  DG+S +  SG G++L SP G  ++QAIR  F
Sbjct: 434 QEWWTLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGF 472


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