BLASTX nr result

ID: Panax21_contig00004738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004738
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79251.1| hypothetical protein VITISV_038223 [Vitis vinifera]    69   4e-22
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                71   2e-21
emb|CAA16968.1| hypothetical protein [Arabidopsis thaliana] gi|7...    77   4e-21
emb|CAN75172.1| hypothetical protein VITISV_033306 [Vitis vinifera]    66   8e-20
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      70   1e-19

>emb|CAN79251.1| hypothetical protein VITISV_038223 [Vitis vinifera]
          Length = 665

 Score = 68.9 bits (167), Expect(2) = 4e-22
 Identities = 32/65 (49%), Positives = 47/65 (72%)
 Frame = -1

Query: 196 YADGSSTLDVSGAGIILTSPEGFRVQQAIRFQFKATNNEAEYEAVLAGLRLAKSLEVQRI 17
           + DG+S    SG G++L SP G  ++QAIR  F A+NNEAEYEA+L+GL LA +L + ++
Sbjct: 434 WVDGASRSSGSGVGLLLQSPTGEXLEQAIRLGFPASNNEAEYEAILSGLDLALALSISKL 493

Query: 16  VIFSD 2
            ++SD
Sbjct: 494 KVYSD 498



 Score = 60.5 bits (145), Expect(2) = 4e-22
 Identities = 27/49 (55%), Positives = 38/49 (77%)
 Frame = -2

Query: 459 TASRKLRQYFQGRLVIVYTDQPLKKIMGKPEVSGRLAAWTMELSQFFIE 313
           +A++KLR YFQ   VIV TDQPL+ I+ KP+++GR+  W +ELS+F IE
Sbjct: 348 SAAQKLRHYFQAHPVIVLTDQPLRNILYKPDLTGRMLQWAIELSEFGIE 396


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 71.2 bits (173), Expect(2) = 2e-21
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = -1

Query: 196  YADGSSTLDVSGAGIILTSPEGFRVQQAIRFQFKATNNEAEYEAVLAGLRLAKSLEVQRI 17
            Y DGSS    SGAG++L  P    V+QA++F+FK +NN+AEYEA++AGL LA  LEV  I
Sbjct: 1331 YVDGSSNSRSSGAGVVLEGPGEIVVEQAMKFEFKTSNNQAEYEAIIAGLHLAIELEVTNI 1390

Query: 16   VIFSD 2
               SD
Sbjct: 1391 TCKSD 1395



 Score = 56.2 bits (134), Expect(2) = 2e-21
 Identities = 23/50 (46%), Positives = 36/50 (72%)
 Frame = -2

Query: 462  ITASRKLRQYFQGRLVIVYTDQPLKKIMGKPEVSGRLAAWTMELSQFFIE 313
            +  +R++R YFQ   VIV T+ P+ KI+ KP+++GR+  W +ELS+F IE
Sbjct: 1249 VITARRMRMYFQNHKVIVRTNYPIMKILTKPDLAGRMIGWAVELSEFHIE 1298


>emb|CAA16968.1| hypothetical protein [Arabidopsis thaliana]
           gi|7270126|emb|CAB79940.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 452

 Score = 76.6 bits (187), Expect(2) = 4e-21
 Identities = 39/65 (60%), Positives = 50/65 (76%)
 Frame = -1

Query: 196 YADGSSTLDVSGAGIILTSPEGFRVQQAIRFQFKATNNEAEYEAVLAGLRLAKSLEVQRI 17
           Y+DGSS+L  S  GI+L SP    ++Q++R QFKA+NNEAEYEA+LAGLRLAK L  ++I
Sbjct: 212 YSDGSSSLQGSSLGILLQSPTREILEQSLRLQFKASNNEAEYEALLAGLRLAKGLGAKQI 271

Query: 16  VIFSD 2
             FSD
Sbjct: 272 KAFSD 276



 Score = 49.7 bits (117), Expect(2) = 4e-21
 Identities = 23/47 (48%), Positives = 33/47 (70%)
 Frame = -2

Query: 453 SRKLRQYFQGRLVIVYTDQPLKKIMGKPEVSGRLAAWTMELSQFFIE 313
           +RKLR YFQ    IV+TDQPL+ ++  P  S R+A W +ELS++ +E
Sbjct: 132 ARKLRPYFQSHS-IVFTDQPLRTVLHSPNQSRRIAKWAIELSEYDVE 177


>emb|CAN75172.1| hypothetical protein VITISV_033306 [Vitis vinifera]
          Length = 973

 Score = 65.9 bits (159), Expect(2) = 8e-20
 Identities = 31/65 (47%), Positives = 46/65 (70%)
 Frame = -1

Query: 196 YADGSSTLDVSGAGIILTSPEGFRVQQAIRFQFKATNNEAEYEAVLAGLRLAKSLEVQRI 17
           + DG+S    SG G++L SP G  ++QAIR  F A+NNEAEYEA+L+ L LA +L V ++
Sbjct: 403 FVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSRLDLALALSVSKL 462

Query: 16  VIFSD 2
            +++D
Sbjct: 463 RVYND 467



 Score = 55.8 bits (133), Expect(2) = 8e-20
 Identities = 25/49 (51%), Positives = 36/49 (73%)
 Frame = -2

Query: 459 TASRKLRQYFQGRLVIVYTDQPLKKIMGKPEVSGRLAAWTMELSQFFIE 313
           +A++KLR YFQ   V+V TDQ L+ I+ KP+++GR+  W +ELS F IE
Sbjct: 340 SAAQKLRPYFQAHPVVVLTDQLLRNILNKPDLTGRMLQWAIELSTFGIE 388


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 70.5 bits (171), Expect(2) = 1e-19
 Identities = 32/65 (49%), Positives = 47/65 (72%)
 Frame = -1

Query: 196 YADGSSTLDVSGAGIILTSPEGFRVQQAIRFQFKATNNEAEYEAVLAGLRLAKSLEVQRI 17
           Y DGSST + SGAGI++ SP G   + A++F F A+NNE+EYEAV+ G+ LA++   + I
Sbjct: 740 YTDGSSTTNSSGAGILIISPNGDEFEYALKFTFSASNNESEYEAVITGVELARAAGAEHI 799

Query: 16  VIFSD 2
           V+ +D
Sbjct: 800 VLKTD 804



 Score = 50.4 bits (119), Expect(2) = 1e-19
 Identities = 25/50 (50%), Positives = 32/50 (64%)
 Frame = -2

Query: 462 ITASRKLRQYFQGRLVIVYTDQPLKKIMGKPEVSGRLAAWTMELSQFFIE 313
           + A+RKL+ YF    V V TDQPL+K +   E SGRL  W +ELS F I+
Sbjct: 658 VVAARKLKPYFNAHPVTVLTDQPLEKALENFEKSGRLIKWAVELSGFGIQ 707


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