BLASTX nr result
ID: Panax21_contig00004738
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00004738 (463 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN79251.1| hypothetical protein VITISV_038223 [Vitis vinifera] 69 4e-22 gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris] 71 2e-21 emb|CAA16968.1| hypothetical protein [Arabidopsis thaliana] gi|7... 77 4e-21 emb|CAN75172.1| hypothetical protein VITISV_033306 [Vitis vinifera] 66 8e-20 gb|AAY99339.1| pol-polyprotein [Silene latifolia] 70 1e-19 >emb|CAN79251.1| hypothetical protein VITISV_038223 [Vitis vinifera] Length = 665 Score = 68.9 bits (167), Expect(2) = 4e-22 Identities = 32/65 (49%), Positives = 47/65 (72%) Frame = -1 Query: 196 YADGSSTLDVSGAGIILTSPEGFRVQQAIRFQFKATNNEAEYEAVLAGLRLAKSLEVQRI 17 + DG+S SG G++L SP G ++QAIR F A+NNEAEYEA+L+GL LA +L + ++ Sbjct: 434 WVDGASRSSGSGVGLLLQSPTGEXLEQAIRLGFPASNNEAEYEAILSGLDLALALSISKL 493 Query: 16 VIFSD 2 ++SD Sbjct: 494 KVYSD 498 Score = 60.5 bits (145), Expect(2) = 4e-22 Identities = 27/49 (55%), Positives = 38/49 (77%) Frame = -2 Query: 459 TASRKLRQYFQGRLVIVYTDQPLKKIMGKPEVSGRLAAWTMELSQFFIE 313 +A++KLR YFQ VIV TDQPL+ I+ KP+++GR+ W +ELS+F IE Sbjct: 348 SAAQKLRHYFQAHPVIVLTDQPLRNILYKPDLTGRMLQWAIELSEFGIE 396 >gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris] Length = 1859 Score = 71.2 bits (173), Expect(2) = 2e-21 Identities = 35/65 (53%), Positives = 45/65 (69%) Frame = -1 Query: 196 YADGSSTLDVSGAGIILTSPEGFRVQQAIRFQFKATNNEAEYEAVLAGLRLAKSLEVQRI 17 Y DGSS SGAG++L P V+QA++F+FK +NN+AEYEA++AGL LA LEV I Sbjct: 1331 YVDGSSNSRSSGAGVVLEGPGEIVVEQAMKFEFKTSNNQAEYEAIIAGLHLAIELEVTNI 1390 Query: 16 VIFSD 2 SD Sbjct: 1391 TCKSD 1395 Score = 56.2 bits (134), Expect(2) = 2e-21 Identities = 23/50 (46%), Positives = 36/50 (72%) Frame = -2 Query: 462 ITASRKLRQYFQGRLVIVYTDQPLKKIMGKPEVSGRLAAWTMELSQFFIE 313 + +R++R YFQ VIV T+ P+ KI+ KP+++GR+ W +ELS+F IE Sbjct: 1249 VITARRMRMYFQNHKVIVRTNYPIMKILTKPDLAGRMIGWAVELSEFHIE 1298 >emb|CAA16968.1| hypothetical protein [Arabidopsis thaliana] gi|7270126|emb|CAB79940.1| hypothetical protein [Arabidopsis thaliana] Length = 452 Score = 76.6 bits (187), Expect(2) = 4e-21 Identities = 39/65 (60%), Positives = 50/65 (76%) Frame = -1 Query: 196 YADGSSTLDVSGAGIILTSPEGFRVQQAIRFQFKATNNEAEYEAVLAGLRLAKSLEVQRI 17 Y+DGSS+L S GI+L SP ++Q++R QFKA+NNEAEYEA+LAGLRLAK L ++I Sbjct: 212 YSDGSSSLQGSSLGILLQSPTREILEQSLRLQFKASNNEAEYEALLAGLRLAKGLGAKQI 271 Query: 16 VIFSD 2 FSD Sbjct: 272 KAFSD 276 Score = 49.7 bits (117), Expect(2) = 4e-21 Identities = 23/47 (48%), Positives = 33/47 (70%) Frame = -2 Query: 453 SRKLRQYFQGRLVIVYTDQPLKKIMGKPEVSGRLAAWTMELSQFFIE 313 +RKLR YFQ IV+TDQPL+ ++ P S R+A W +ELS++ +E Sbjct: 132 ARKLRPYFQSHS-IVFTDQPLRTVLHSPNQSRRIAKWAIELSEYDVE 177 >emb|CAN75172.1| hypothetical protein VITISV_033306 [Vitis vinifera] Length = 973 Score = 65.9 bits (159), Expect(2) = 8e-20 Identities = 31/65 (47%), Positives = 46/65 (70%) Frame = -1 Query: 196 YADGSSTLDVSGAGIILTSPEGFRVQQAIRFQFKATNNEAEYEAVLAGLRLAKSLEVQRI 17 + DG+S SG G++L SP G ++QAIR F A+NNEAEYEA+L+ L LA +L V ++ Sbjct: 403 FVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSRLDLALALSVSKL 462 Query: 16 VIFSD 2 +++D Sbjct: 463 RVYND 467 Score = 55.8 bits (133), Expect(2) = 8e-20 Identities = 25/49 (51%), Positives = 36/49 (73%) Frame = -2 Query: 459 TASRKLRQYFQGRLVIVYTDQPLKKIMGKPEVSGRLAAWTMELSQFFIE 313 +A++KLR YFQ V+V TDQ L+ I+ KP+++GR+ W +ELS F IE Sbjct: 340 SAAQKLRPYFQAHPVVVLTDQLLRNILNKPDLTGRMLQWAIELSTFGIE 388 >gb|AAY99339.1| pol-polyprotein [Silene latifolia] Length = 1307 Score = 70.5 bits (171), Expect(2) = 1e-19 Identities = 32/65 (49%), Positives = 47/65 (72%) Frame = -1 Query: 196 YADGSSTLDVSGAGIILTSPEGFRVQQAIRFQFKATNNEAEYEAVLAGLRLAKSLEVQRI 17 Y DGSST + SGAGI++ SP G + A++F F A+NNE+EYEAV+ G+ LA++ + I Sbjct: 740 YTDGSSTTNSSGAGILIISPNGDEFEYALKFTFSASNNESEYEAVITGVELARAAGAEHI 799 Query: 16 VIFSD 2 V+ +D Sbjct: 800 VLKTD 804 Score = 50.4 bits (119), Expect(2) = 1e-19 Identities = 25/50 (50%), Positives = 32/50 (64%) Frame = -2 Query: 462 ITASRKLRQYFQGRLVIVYTDQPLKKIMGKPEVSGRLAAWTMELSQFFIE 313 + A+RKL+ YF V V TDQPL+K + E SGRL W +ELS F I+ Sbjct: 658 VVAARKLKPYFNAHPVTVLTDQPLEKALENFEKSGRLIKWAVELSGFGIQ 707