BLASTX nr result
ID: Panax21_contig00004714
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00004714
(3027 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16571.3| unnamed protein product [Vitis vinifera] 458 e-126
ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245... 414 e-113
ref|XP_002523390.1| nuclear pore complex protein nup153, putativ... 388 e-105
ref|XP_004147125.1| PREDICTED: uncharacterized protein LOC101219... 311 9e-82
ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thali... 311 9e-82
>emb|CBI16571.3| unnamed protein product [Vitis vinifera]
Length = 1685
Score = 458 bits (1179), Expect = e-126
Identities = 311/693 (44%), Positives = 398/693 (57%), Gaps = 63/693 (9%)
Frame = -3
Query: 2986 SNQSVRRDSPKGSEVDMKLPGQIGLTTVPGTSIQSWSSGKIISSRPADGRSSSLPSSGFQ 2807
S+QS S + E +LPG+IG T + S QSWS GK + + + S L SS +
Sbjct: 588 SSQSSHNFS-RSFETHKELPGKIGSTNLQNAS-QSWSGGKFTFPKSTEEKLS-LSSSFVE 644
Query: 2806 RKQSDNYDTMSSNAHVPGGPPRNPLYSKDFADSSTRVNSFR-------HGASTEGNIVSL 2648
+S+ S VPGGP +P+Y KD A S N R G+ GN+ +
Sbjct: 645 SGRSETAGINLSIPQVPGGPVGSPIYPKDAATSLAAGNFGRISQSRGQRGSMVAGNVEPI 704
Query: 2647 PVVHSSQIPLQENFTSGKSANRAASTKVS--------ELNSGPNLSKQFLNVEEMAKELD 2492
SQ+ +QENF + ++ K + +LNS PNLSKQF NV+EMAKELD
Sbjct: 705 SSTLGSQLSMQENFPAKSPNYKSYPPKENYRTPPLQGQLNSEPNLSKQFGNVKEMAKELD 764
Query: 2491 TLMERIDGLDGFSDASIAHQKSSVVALEEGIWTLSERCRNWRGIMDERLRKIQLIRDKTV 2312
TL++ I+G GF DA QKSSV+ LE+GI TLSE CR WR I+D++ +I + DKTV
Sbjct: 765 TLLQCIEGPGGFRDACTIFQKSSVMELEQGIGTLSENCRMWRSIIDQQHGEIHHLLDKTV 824
Query: 2311 QVLARKIYIEGIVKQATDSRYWDLWNRQKXXXXXXXXXXXXXXXXXXXXXXXXXXERHFN 2132
QVLARK+Y++GIVKQATDSRYWDLW+RQK ERHFN
Sbjct: 825 QVLARKVYMQGIVKQATDSRYWDLWSRQKLASELELKRRNILKINQDLTNQLIELERHFN 884
Query: 2131 SLELNKFGERDLN---LRAFQGNHGPSRHVNSLHSLHNTMSAQLAAAEQLSKCLSKQMAV 1961
++ELNKFGE N RA Q GPSRH+ SLHSLHNTM++QLAAAEQLS+CLSKQM +
Sbjct: 885 AIELNKFGENGGNHVGRRALQSRSGPSRHMQSLHSLHNTMNSQLAAAEQLSECLSKQMTM 944
Query: 1960 LSIESPSMKKQNIRRELFETIGIPYDDSSFISPDEVRGFDTPLKKEFLSSSSSAVAKEQP 1781
LSI+S ++KKQN+++ELFE IGIPYD +S SP DTP K FL SSSSA K+Q
Sbjct: 945 LSIDS-TVKKQNVKKELFEAIGIPYDSASVSSPTISNTSDTPSMKNFLVSSSSA-NKDQS 1002
Query: 1780 WRNQSSTMKSSEPETARRRRDSLDRNWSSFNPPKTTVKRMLLQEDRQKENTTISSLSVDN 1601
RNQ S +KS EPET RRRRDSL ++W++F PPKT VKRM+L+E +QK S SVD
Sbjct: 1003 RRNQLSALKSYEPETVRRRRDSLGQSWANFEPPKTIVKRMVLEE-QQKVGVNKPSFSVDK 1061
Query: 1600 -QISDHELMERSATASSL-----STFLYPSRLRGTQDAITKESSESPSTSLFK-ADELQN 1442
Q S H+L E SA A S S FLYPSR +G + K++S SPSTSLF+ A++
Sbjct: 1062 RQFSPHKL-EGSAFAYSNNNTTPSAFLYPSRNKGIHEISAKQASYSPSTSLFRWANDPSG 1120
Query: 1441 ITQSV------------MNFSTLSSQSAGRSRGALNHFAA-------------------- 1358
+QS N S SS SA +S ++ A
Sbjct: 1121 PSQSFGSRSPTPHALPGNNLSAFSSLSAPQSSPVVDQSNAMETCNLTNERSSSGVTFVEK 1180
Query: 1357 ------DESRSIQQSEIHYHQTPSNSTRFPAQRLSSPEKINAVWSSTDKQVGLSGFTIGN 1196
+E++S SE H QTP ST PA+ L +K N + +S K L+ TIG+
Sbjct: 1181 SDAVSINETKSTLLSESHLPQTPIISTSLPARTLPLTKKPNEMSNSNGKGTVLAKPTIGS 1240
Query: 1195 LKHEPTIIESSFSGKSSKAPFSPVLASGSAPSL 1097
+K +P SSFS +S +PFSP+ A APSL
Sbjct: 1241 VKQKPVSPGSSFS-QSGVSPFSPISAVQPAPSL 1272
Score = 118 bits (296), Expect = 8e-24
Identities = 100/267 (37%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Frame = -3
Query: 820 EDLVASSVAPSLNFPSKSPSTEVPKVSLKTEKKFEVLASSSQPKLQTGTS----SSKLEA 653
++ + S + SLN S S T + K K +V ++S P Q+ T S KLE
Sbjct: 1341 QETLVPSPSTSLNLTSASLQTSLQSPLGKFSSKSDVNSASQVPPQQSKTPTREFSLKLEP 1400
Query: 652 SLPTKPTSEVPTXXXXXXXXXXSDLASSVSHVA-MEPKPEQPSAAAPVLSSTSLSGSWTA 476
S+P+ E T + LAS S+V M KPEQ A + + +SGS A
Sbjct: 1401 SVPSASKIESSTGLASGNLPSFNSLASHASNVTTMNAKPEQLPADGALQAHPLISGS--A 1458
Query: 475 NDGKTDSPDVEFTQEDEMEEEAPEVNQTTELTLGSLGGFGIGSAPNPTATKPNPFGAXXX 296
K +S DV TQEDEMEEEAPE +Q TEL NP +T PF
Sbjct: 1459 AGSKNESLDVTVTQEDEMEEEAPETSQATEL------------RTNPAST---PF----- 1498
Query: 295 XXXXXXXXXXTMTVPGGELFKPAXXXXXXXXXXXXXQLANYTAFTGGFSSG-TATQISTG 119
TMTVP GELF+PA Q N AF+GG ++G TA +
Sbjct: 1499 ----------TMTVPSGELFRPASFNFQSPQPSQPPQSTNLGAFSGGINAGITAQAPARS 1548
Query: 118 RFDHPVQTGSGQQALGTVLGSFGQSRQ 38
F Q G+GQQALG+VLG+FGQSRQ
Sbjct: 1549 GFGQLAQIGAGQQALGSVLGAFGQSRQ 1575
>ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245011 [Vitis vinifera]
Length = 1696
Score = 414 bits (1065), Expect = e-113
Identities = 291/678 (42%), Positives = 373/678 (55%), Gaps = 48/678 (7%)
Frame = -3
Query: 2986 SNQSVRRDSPKGSEVDMKLPGQIGLTTVPGTSIQSWSSGKIISSRPADGRSSSLPSSGFQ 2807
S+QS S + E +LPG+IG T + S QSWS GK + + + S L SS +
Sbjct: 588 SSQSSHNFS-RSFETHKELPGKIGSTNLQNAS-QSWSGGKFTFPKSTEEKLS-LSSSFVE 644
Query: 2806 RKQSDNYDTMSSNAHVPGGPPRNPLYSKDFADSSTRVNSFRHGASTEGNIVSLPVVHSSQ 2627
+S+ S VPGGP +P+Y KD A +S +F + + G
Sbjct: 645 SGRSETAGINLSIPQVPGGPVGSPIYPKDAA-TSLAAGNFGRISQSRG------------ 691
Query: 2626 IPLQENFTSGKSANRAASTKVSELNSGPNLSKQFLNVEEMAKELDTLMERIDGLDGFSDA 2447
Q + V+EMAKELDTL++ I+G GF DA
Sbjct: 692 --------------------------------QRVQVKEMAKELDTLLQCIEGPGGFRDA 719
Query: 2446 SIAHQKSSVVALEEGIWTLSERCRNWRGIMDERLRKIQLIRDKTVQVLARKIYIEGIVKQ 2267
QKSSV+ LE+GI TLSE CR WR I+D++ +I + DKTVQVLARK+Y++GIVKQ
Sbjct: 720 CTIFQKSSVMELEQGIGTLSENCRMWRSIIDQQHGEIHHLLDKTVQVLARKVYMQGIVKQ 779
Query: 2266 ATDSRYWDLWNRQKXXXXXXXXXXXXXXXXXXXXXXXXXXERHFNSLELNKFGERDLN-- 2093
ATDSRYWDLW+RQK ERHFN++ELNKFGE N
Sbjct: 780 ATDSRYWDLWSRQKLASELELKRRNILKINQDLTNQLIELERHFNAIELNKFGENGGNHV 839
Query: 2092 -LRAFQGNHGPSRHVNSLHSLHNTMSAQLAAAEQLSKCLSKQMAVLSIESPSMKKQNIRR 1916
RA Q GPSRH+ SLHSLHNTM++QLAAAEQLS+CLSKQM +LSI+S ++KKQN+++
Sbjct: 840 GRRALQSRSGPSRHMQSLHSLHNTMNSQLAAAEQLSECLSKQMTMLSIDS-TVKKQNVKK 898
Query: 1915 ELFETIGIPYDDSSFISPDEVRGFDTPLKKEFLSSSSSAVAKEQPWRNQSSTMKSSEPET 1736
ELFE IGIPYD +S SP DTP K FL SSSSA K+Q RNQ S +KS EPET
Sbjct: 899 ELFEAIGIPYDSASVSSPTISNTSDTPSMKNFLVSSSSA-NKDQSRRNQLSALKSYEPET 957
Query: 1735 ARRRRDSLDRNWSSFNPPKTTVKRMLLQEDRQKENTTISSLSVDN-QISDHELMERSATA 1559
RRRRDSL ++W++F PPKT VKRM+L+E +QK S SVD Q S H+L E SA A
Sbjct: 958 VRRRRDSLGQSWANFEPPKTIVKRMVLEE-QQKVGVNKPSFSVDKRQFSPHKL-EGSAFA 1015
Query: 1558 SSL-----STFLYPSRLRGTQDAITKESSESPSTSLFK-ADELQNITQSV---------- 1427
S S FLYPSR +G + K++S SPSTSLF+ A++ +QS
Sbjct: 1016 YSNNNTTPSAFLYPSRNKGIHEISAKQASYSPSTSLFRWANDPSGPSQSFGSRSPTPHAL 1075
Query: 1426 --MNFSTLSSQSAGRSRGALNHFAA--------------------------DESRSIQQS 1331
N S SS SA +S ++ A +E++S S
Sbjct: 1076 PGNNLSAFSSLSAPQSSPVVDQSNAMETCNLTNERSSSGVTFVEKSDAVSINETKSTLLS 1135
Query: 1330 EIHYHQTPSNSTRFPAQRLSSPEKINAVWSSTDKQVGLSGFTIGNLKHEPTIIESSFSGK 1151
E H QTP ST PA+ L +K N + +S K L+ TIG++K +P SSFS +
Sbjct: 1136 ESHLPQTPIISTSLPARTLPLTKKPNEMSNSNGKGTVLAKPTIGSVKQKPVSPGSSFS-Q 1194
Query: 1150 SSKAPFSPVLASGSAPSL 1097
S +PFSP+ A APSL
Sbjct: 1195 SGVSPFSPISAVQPAPSL 1212
Score = 159 bits (401), Expect = 6e-36
Identities = 112/272 (41%), Positives = 142/272 (52%), Gaps = 11/272 (4%)
Frame = -3
Query: 820 EDLVASSVAPSLNFPSKSPSTEVPKVSLKTEKKFEVLASSSQPKLQTGTS----SSKLEA 653
++ + S + SLN S S T + K K +V ++S P Q+ T S KLE
Sbjct: 1317 QETLVPSPSTSLNLTSASLQTSLQSPLGKFSSKSDVNSASQVPPQQSKTPTREFSLKLEP 1376
Query: 652 SLPTKPTSEVPTXXXXXXXXXXSDLASSVSHVA-MEPKPEQPSAAAPVLSSTSLSGSWTA 476
S+P+ E T + LAS S+V M KPEQ A + + +SGS A
Sbjct: 1377 SVPSASKIESSTGLASGNLPSFNSLASHASNVTTMNAKPEQLPADGALQAHPLISGS--A 1434
Query: 475 NDGKTDSPDVEFTQEDEMEEEAPEVNQTTELTLGSLGGFGIGSAPNPTATKPNPFGA--- 305
K +S DV TQEDEMEEEAPE +Q TEL+LG+LG FG+GS+PNP A KP PFG
Sbjct: 1435 AGSKNESLDVTVTQEDEMEEEAPETSQATELSLGNLGAFGLGSSPNPMAAKPTPFGGPFG 1494
Query: 304 --XXXXXXXXXXXXXTMTVPGGELFKPAXXXXXXXXXXXXXQLANYTAFTGGFSSG-TAT 134
TMTVP GELF+PA Q N AF+GG ++G TA
Sbjct: 1495 GQFVNAGTNPASTPFTMTVPSGELFRPASFNFQSPQPSQPPQSTNLGAFSGGINAGITAQ 1554
Query: 133 QISTGRFDHPVQTGSGQQALGTVLGSFGQSRQ 38
+ F Q G+GQQALG+VLG+FGQSRQ
Sbjct: 1555 APARSGFGQLAQIGAGQQALGSVLGAFGQSRQ 1586
>ref|XP_002523390.1| nuclear pore complex protein nup153, putative [Ricinus communis]
gi|223537340|gb|EEF38969.1| nuclear pore complex protein
nup153, putative [Ricinus communis]
Length = 1824
Score = 388 bits (996), Expect = e-105
Identities = 278/703 (39%), Positives = 374/703 (53%), Gaps = 70/703 (9%)
Frame = -3
Query: 2959 PKGSEVDMKLPGQIGLTTVPGTSIQSWSSGKIISSRPADGRSSSLPSSGFQRKQSDNYDT 2780
PK S V PG + G Q WSS K+I S +D ++S+L S+ Q +SDN
Sbjct: 601 PKDSRVIFGSPG------LHGAPSQPWSSEKVICSGGSDSKTSALTSTLIQGHKSDNTGL 654
Query: 2779 MSSNAHVPGGPPRNPLYSKD------FADSSTRVNSFRHGASTEGNIVSLPVVHSSQIPL 2618
A+VP P + K A+ S R + G I LP + SSQ+P
Sbjct: 655 SVDAANVPLNLAGKPFHLKGNIGDTPSANFSVRPTHTVVQKAKTGMIDLLPSIRSSQLPS 714
Query: 2617 QENFTSGKSANR------AASTKVSELNSGPNLSKQFLNVEEMAKELDTLMERIDGLDGF 2456
QE+ G+S NR A S S P LS+QF N++EMAKELD+L+E I+ GF
Sbjct: 715 QESLALGRSGNRWPYSSKDAHKAPSLSKSEPYLSRQFGNIKEMAKELDSLLECIEEPGGF 774
Query: 2455 SDASIAHQKSSVVALEEGIWTLSERCRNWRGIMDERLRKIQLIRDKTVQVLARKIYIEGI 2276
DA Q+ SV ALEE + TLSE+C W+ +MDE+L ++Q + DKTVQVLARKIY++GI
Sbjct: 775 KDACTISQRGSVEALEERMQTLSEKCITWKSMMDEQLGEVQHLLDKTVQVLARKIYMDGI 834
Query: 2275 VKQATDSRYWDLWNRQKXXXXXXXXXXXXXXXXXXXXXXXXXXERHFNSLELNKFGER-- 2102
VKQA+DSRYW+LWNRQK ERHFN+LEL+KF E
Sbjct: 835 VKQASDSRYWELWNRQKLGSEFELKRRHILKLNQVLTNQLIDLERHFNTLELHKFDENGG 894
Query: 2101 -DLNLRAFQGNHGPSRHVNSLHSLHNTMSAQLAAAEQLSKCLSKQMAVLSIESPSMKKQN 1925
R FQ HGPSR + SLHSL+NT ++QLAAAE LS+CLSKQMAVLS+ESP +K++N
Sbjct: 895 VPKGRREFQSRHGPSRQIQSLHSLYNTTNSQLAAAEHLSECLSKQMAVLSVESP-VKQKN 953
Query: 1924 IRRELFETIGIPYDDSSFISPDEVRGFDTPLKKEFLSSSSSAVAKEQPWRNQSSTMKSSE 1745
I++ELFETIGIPY +++F SPD + D+ + L S SA K Q R Q S MKSS+
Sbjct: 954 IKKELFETIGIPY-ETTFSSPDSTKVGDSSSSMKLL-LSGSASNKSQSRRRQLSVMKSSD 1011
Query: 1744 PETARRRRDSLDRNWSSFNPPKTTVKRMLLQEDRQKENTTISSL----SVDNQISDHELM 1577
ETARRRRDSLD++W+SF P KTTVKR+LLQE QK + + SSL +DN + D +
Sbjct: 1012 SETARRRRDSLDQSWASFEPKKTTVKRVLLQE-TQKTSVSKSSLMDRQQLDNSVVDSSAV 1070
Query: 1576 ERSATASSLSTFLYPSRLRGTQDAITKES-SESPSTSLFKADELQ--------------- 1445
+ ST YPS +G Q K++ + P+ S + +D L
Sbjct: 1071 NHPKDLTPPSTLTYPSGNKGIQFTFQKQALDKKPTPSRWASDSLPPSQSTAQATGLRPPM 1130
Query: 1444 ----------------NITQSVMNFST--------LSSQSAGRSRGALNHFAADESRSIQ 1337
IT +++ T + S G+S L H ES+SIQ
Sbjct: 1131 LGSGAALPSISPYQALPITGQILSRETGIVTSDELSGTGSTGKSDSLLTH----ESKSIQ 1186
Query: 1336 QSEIHYHQTPSNSTRFPAQRLSSPEKINAVWSSTDKQVGLSGFTIGNLKHEPTIIESSF- 1160
QSE + H+ S S PAQ + K N + + K G + + + H PT + +F
Sbjct: 1187 QSETNLHKKSSVSMELPAQ-APTLMKSNEMLNCNAKGAGFANSRMATMSHVPTNTKGAFL 1245
Query: 1159 --SGKSSKAPF------SPVLAS--GSAPSLSDSGTSKSDPGQ 1061
S++ F SP+++S G+ P S S+S P +
Sbjct: 1246 KSHSISNETSFSLLTSASPLVSSHPGTVPQFS-VAASRSQPSE 1287
Score = 135 bits (340), Expect = 7e-29
Identities = 94/265 (35%), Positives = 130/265 (49%), Gaps = 1/265 (0%)
Frame = -3
Query: 829 QDPEDLVASSVAPSLNFPSKSPSTEVPKVSLKTEKKFEVLASSSQPKLQTGTSSSKLEAS 650
Q P + S P+ S+ +++ +S K A +QP + S KLE
Sbjct: 1425 QSPTSKTSPSTGPTSPLTSEPSKSQLQPLSDKFNSGTTTTAPKTQP--EPPAFSLKLETP 1482
Query: 649 LPTKPTSEVPTXXXXXXXXXXSDLASSVSHVAMEPKPEQPSAAAPVLSSTSLSGSWTAND 470
+ + P SE+ T + +AS S + + QP+ AP+ S + SG
Sbjct: 1483 VSSVPASEISTGLGSGSQSSLNSMASPASGIQLNV---QPTFGAPLASDSMASG------ 1533
Query: 469 GKTDSPDVEFTQEDEMEEEAPEVNQTTELTLGSLGGFGIGSAPNPTATKPNPFGAXXXXX 290
K + D+ T+EDEMEEEAPE ++T E++LGS FG+GS P TA + NPFG
Sbjct: 1534 -KNANMDLAVTEEDEMEEEAPEASRTNEISLGS---FGLGSTPASTAPRANPFG---NIV 1586
Query: 289 XXXXXXXXTMTVPGGELFKPAXXXXXXXXXXXXXQLANYTAFTGGFSSGTATQI-STGRF 113
TMTVP GELFKPA +N F+GG+++ Q + F
Sbjct: 1587 TNQASSSFTMTVPSGELFKPASFSFQSPLPLQPSPPSNMGTFSGGYAANAVAQAPAPNAF 1646
Query: 112 DHPVQTGSGQQALGTVLGSFGQSRQ 38
P Q G+GQQALG+VLGSFGQSRQ
Sbjct: 1647 AQPAQMGAGQQALGSVLGSFGQSRQ 1671
>ref|XP_004147125.1| PREDICTED: uncharacterized protein LOC101219502 [Cucumis sativus]
Length = 2161
Score = 311 bits (796), Expect = 9e-82
Identities = 235/624 (37%), Positives = 333/624 (53%), Gaps = 30/624 (4%)
Frame = -3
Query: 2878 SSGKIISSRPADGRSSSLPSSGFQRKQSDNYDTMSSNAHVPGGPPRNPLYSKDFADSSTR 2699
SS K +S + D S S+ Q ++NY A+ G P KD ST
Sbjct: 1097 SSEKAMSFKKIDPVPSVFTSNSLQSSNTENYGPSFGTANAFTGFAGKPFQPKDVP--STL 1154
Query: 2698 VNSFRHGASTEGNIVSLPVVHSSQIPLQENFTSGKSANRAASTKVSELNSGPNLSKQFLN 2519
S R G I SLPV+ SSQI LQ+ F+SGK +N ++ P L+K
Sbjct: 1155 TQSGRQATGGAGKIESLPVIRSSQISLQDKFSSGKISNEKHDGSERYYSNSP-LAKP--- 1210
Query: 2518 VEEMAKELDTLMERIDGLDGFSDASIAHQKSSVVALEEGIWTLSERCRNWRGIMDERLRK 2339
++EM + LDTL+E I+ GF DA A QKSSV ALE G+ +LS+ C+ WR M+ER ++
Sbjct: 1211 MKEMCEGLDTLLESIEESGGFMDACTAFQKSSVEALELGLASLSDGCQIWRSTMNERSQE 1270
Query: 2338 IQLIRDKTVQVLARKIYIEGIVKQATDSRYWDLWNRQKXXXXXXXXXXXXXXXXXXXXXX 2159
+Q + DK VQVL++K YIEGIV Q++DS+YW+ W+RQK
Sbjct: 1271 VQNLFDKMVQVLSKKTYIEGIVMQSSDSKYWEQWDRQKLSSELELKRQHILKMNQNITNQ 1330
Query: 2158 XXXXERHFNSLELNKFG---ERDLNLRAFQGNHGPSRHVNSLHSLHNTMSAQLAAAEQLS 1988
ERHFN LELNKFG E ++ RA Q G SRH +S+HSL+N M +QLA A+ LS
Sbjct: 1331 LIELERHFNGLELNKFGGNEESQVSERALQRKFGSSRHSHSVHSLNNIMGSQLATAQLLS 1390
Query: 1987 KCLSKQMAVLSIESPSMKKQNIRRELFETIGIPYDDSSFISPDEVRGFDTPLKKEFLSSS 1808
+ LSKQ+A L++ESPS+K+Q+ +ELFE+IG+ Y D+SF SP+ + +T KK LSS
Sbjct: 1391 ESLSKQLAALNMESPSLKRQSATKELFESIGLTY-DASFSSPNVNKIAETSSKKLLLSSD 1449
Query: 1807 SSAVAKEQPWRNQSSTMKSSEPETARRRRDSLDRNWSSFNPPKTTVKRMLLQ-----EDR 1643
S + +K R Q S K+SE ET RRRRDSLDRN +S +PPKTTVKRMLLQ E++
Sbjct: 1450 SFS-SKGTSRRKQQSGTKNSEAETGRRRRDSLDRNLASVDPPKTTVKRMLLQGIPSSEEK 1508
Query: 1642 QKENTT--------------ISSLSVDNQISDHELMERSATASSLSTFLYPSRLRGTQDA 1505
Q + T SS+S ++ + H+ E T ++ L PS +
Sbjct: 1509 QFCSRTPEGAATVARPASRITSSISSSSKNAGHD-SENPETPFMWNSPLQPSNTSRQKSL 1567
Query: 1504 ITKESSESPST--SLFKAD-----ELQNITQSVMNFSTLSSQSAGRSRGALNHFAADESR 1346
++ + +P + +F++ + N SV + + + + A + F+A S
Sbjct: 1568 PLQKINVTPPSPPPVFQSSHDMLKKKNNEAHSVTSENKFTDVACPEKSKASDFFSATRSD 1627
Query: 1345 SIQQSEIHYHQTPSNSTRFPAQRLSSPEKINAV-WSSTDKQVGLSGFTIGNLKHEPTIIE 1169
S+Q+S I+ Q S+ F P I+++ S+ D Q N+K T
Sbjct: 1628 SVQKSNINVDQ---KSSIFTISSKQMPTPIDSIATSNVDNQ------KTANVKERHT-TT 1677
Query: 1168 SSFSGKSSKAPFSPVLASGSAPSL 1097
S F G ++K P SP + GS PSL
Sbjct: 1678 SPFFGSANK-PESPFV--GSMPSL 1698
Score = 122 bits (307), Expect = 4e-25
Identities = 93/271 (34%), Positives = 122/271 (45%), Gaps = 7/271 (2%)
Frame = -3
Query: 829 QDPEDLVASSVAPSLNFPSKSPSTEVPKVSLKTEKKFEVLAS---SSQPKLQTGTSSSKL 659
Q P+ + S SLN +S TE+ + + ++L+S S + K Q + +
Sbjct: 1780 QAPKIVPTSPTLSSLNPTLESSKTELSVPKSNDDAEEQILSSKPGSHELKFQPSITPADK 1839
Query: 658 EASLPTKPTSEVPTXXXXXXXXXXSDLASSVSHVAMEPKPEQPSAAAPVLSSTSLSGSWT 479
PT T V D+ S+V +P+QPS A + S +L+
Sbjct: 1840 NHVEPTSKTQTV-----------FKDVGGQDSNVVGNAQPQQPSVAFASIPSPNLTSKIF 1888
Query: 478 ANDGKTDSPDVEFTQEDEMEEEAPEVNQTTELTLGSLGGFGIGSAPNPTATKPNPFGA-- 305
AN + ++ + TQ+D+M+EEAPE N E L SLGGFG S P KPNPFG
Sbjct: 1889 ANS-RNETSNAVVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPISGGPKPNPFGGPF 1947
Query: 304 XXXXXXXXXXXXXTMTVPGGELFKPAXXXXXXXXXXXXXQL-ANYTAFTGGFSSGTATQ- 131
+ P GELF+PA N AF+G F S TQ
Sbjct: 1948 GNVNAASMTSSFNMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGAFGSAVPTQP 2007
Query: 130 ISTGRFDHPVQTGSGQQALGTVLGSFGQSRQ 38
S G F P Q G GQQALG VLGSFGQSRQ
Sbjct: 2008 PSQGGFGQPSQIGVGQQALGNVLGSFGQSRQ 2038
>ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thaliana]
gi|332195141|gb|AEE33262.1| Nuclear pore complex protein
[Arabidopsis thaliana]
Length = 1816
Score = 311 bits (796), Expect = 9e-82
Identities = 241/668 (36%), Positives = 341/668 (51%), Gaps = 51/668 (7%)
Frame = -3
Query: 2914 LTTVPGTSIQSWSSGKIISSRPADGRSSSLPSS-GFQRKQSDNYDTMSSNAHVPGGPPRN 2738
L + TS Q WSSGK +S P D S PS Q KQS S +V PP +
Sbjct: 596 LQSPQNTSSQPWSSGKSVS--PPDFVSGPFPSMRDTQHKQS----VQSGTGYV--NPPMS 647
Query: 2737 PLYSKDFADSSTRVNSFRH-----GASTEGN-----IVSLPVVHSSQIPLQENFTSGKSA 2588
+ RV++ + G + + N I +P + +SQ+ Q + KSA
Sbjct: 648 IKDKSVQVIETGRVSALSNLSPLLGQNQDTNEGVEKIEPIPSIRASQLSQQVKSSFEKSA 707
Query: 2587 NRAASTKVSELNSGP-----NLSKQFLNVEEMAKELDTLMERIDGLDGFSDASIAHQKSS 2423
+ + L++GP N+S Q N+ EMA+E+DTL++ I+G GF D+ KS+
Sbjct: 708 SHQQHK--TPLSTGPLRLEHNMSNQPSNINEMAREMDTLLQSIEGPGGFKDSCAFILKSN 765
Query: 2422 VVALEEGIWTLSERCRNWRGIMDERLRKIQLIRDKTVQVLARKIYIEGIVKQATDSRYWD 2243
V LE+G+ +L+ +C+ W+ + E+ +IQ + DKT+QVLA+K Y+EG+ KQ D++YW
Sbjct: 766 VEELEQGLESLAGKCQTWKSTIHEQQAEIQHLLDKTIQVLAKKTYMEGMYKQTADNQYWQ 825
Query: 2242 LWNRQKXXXXXXXXXXXXXXXXXXXXXXXXXXERHFNSLELNKFGE---RDLNLRAFQGN 2072
LWNRQK ER+FN LEL+++ E + R
Sbjct: 826 LWNRQKLNPELEAKRQHIMKLNKDLTHQLIELERYFNRLELDRYNEDGGHPVARRGVPNR 885
Query: 2071 HGPSRHVNSLHSLHNTMSAQLAAAEQLSKCLSKQMAVLSIESPSMKKQNIRRELFETIGI 1892
PSR V SLHSLHNTMS+QLAAAEQLS+CLSKQM L I+SP K+N+++ELFETIGI
Sbjct: 886 SAPSRRVQSLHSLHNTMSSQLAAAEQLSECLSKQMTYLKIDSP--VKKNVKQELFETIGI 943
Query: 1891 PYDDSSFISPDEVRGFDTPLKKEFLSSSSSAVAKEQPWRNQSSTMKSSEPETARRRRDSL 1712
PY D+SF SPD V+ + K L SS A +Q + QSS MK+S+PETARRRR+SL
Sbjct: 944 PY-DASFSSPDAVKAKNASSAKNLLLSSIPASINQQSRQRQSSAMKNSDPETARRRRESL 1002
Query: 1711 DRNWSSFNPPKTTVKRMLLQEDRQ---KENTTISS-LSVDNQISDHELMERSATASSLST 1544
DRNW++F PPKTTVKRMLLQE ++ + T +S L N D L+ AS +
Sbjct: 1003 DRNWAAFEPPKTTVKRMLLQEQQKTGMNQQTVLSERLRSANNTQDRSLLHVKDHASPV-- 1060
Query: 1543 FLYPSRLRGTQDAITKESSESPSTSLFKADELQNITQSVMNFSTLSSQ------SAGRSR 1382
S +G ++ +++SE+ ST FK + S S +S+ S +S
Sbjct: 1061 ---VSSNKGIMESFQQDTSEAQSTP-FKTRPPMPQSNSPFTISPISASKPSFNWSGNKSS 1116
Query: 1381 GALNHFAADESRSIQQSEIHYHQTPSNSTRFPAQRLSSPEKINAVWSSTDKQVGLSGFT- 1205
++ A+ES Q + P S+ P + ++S V T+K+ G F+
Sbjct: 1117 NTTSY--AEESAPSQIKDTRTVSQPGGSSFLPKRPVAS-----TVLEQTEKKAGEFKFSE 1169
Query: 1204 ----------IGNLKHEPTIIESS-----------FSGKSSKAPFSPVLASGSAPSLSDS 1088
G+++ T S FS SS AP S S S+ SL
Sbjct: 1170 AKANAFVETAAGSVQRLSTTSSGSDFESSKGFGAQFSTMSSGAPAS----SFSSKSLFGF 1225
Query: 1087 GTSKSDPG 1064
+S S PG
Sbjct: 1226 NSSSSIPG 1233
Score = 128 bits (322), Expect = 8e-27
Identities = 101/269 (37%), Positives = 128/269 (47%), Gaps = 5/269 (1%)
Frame = -3
Query: 829 QDPEDLVASSVAPSLNFPSKSPSTEVPKVS-LKTEKKFEVLASSSQPKLQTGTSSSKLEA 653
Q P+ SS P S+ E S L T+ + +A+++ K Q K E
Sbjct: 1403 QSPQVSTPSSAVPITEPVSEPKKPEAQSSSILSTQSTVDSVANAT--KTQNEPLPVKSEI 1460
Query: 652 SLPTKPTSEVPTXXXXXXXXXXSDLASSVSHVAMEPKPEQPSAAAPV-LSSTSL---SGS 485
S P T+ P S SS++ +A P P ++ P LSST + S
Sbjct: 1461 SNPG--TTVTPVSSSGFLSGFSSGTQSSLASMAA-PSFSWPGSSQPQQLSSTPAPFPASS 1517
Query: 484 WTANDGKTDSPDVEFTQEDEMEEEAPEVNQTTELTLGSLGGFGIGSAPNPTATKPNPFGA 305
T+ + D+ TQEDEM+EEAPE +QTTEL++GS GGFG+GS PNP A K NPFG
Sbjct: 1518 PTSASPFGEKKDIVDTQEDEMDEEAPEASQTTELSMGSFGGFGLGSTPNPGAPKTNPFGG 1577
Query: 304 XXXXXXXXXXXXXTMTVPGGELFKPAXXXXXXXXXXXXXQLANYTAFTGGFSSGTATQIS 125
MTVP GELFKPA + A G FS + +
Sbjct: 1578 PFGNATTTTSNPFNMTVPSGELFKPASFNFQNPQ-------PSQPAGFGSFSVTPSQTPA 1630
Query: 124 TGRFDHPVQTGSGQQALGTVLGSFGQSRQ 38
F P Q G GQQALG+VLGSFGQSRQ
Sbjct: 1631 QSGFGQPSQIGGGQQALGSVLGSFGQSRQ 1659