BLASTX nr result

ID: Panax21_contig00004711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004711
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604816.1| Tubulin beta chain [Medicago truncatula] gi|...   203   1e-50
sp|P29501.1|TBB2_PEA RecName: Full=Tubulin beta-2 chain; AltName...   202   2e-50
gb|ACJ84610.1| unknown [Medicago truncatula]                          202   2e-50
ref|XP_003604818.1| Tubulin beta chain [Medicago truncatula] gi|...   202   2e-50
ref|XP_003559023.1| PREDICTED: tubulin beta-1 chain-like [Brachy...   201   4e-50

>ref|XP_003604816.1| Tubulin beta chain [Medicago truncatula]
           gi|355505871|gb|AES87013.1| Tubulin beta chain [Medicago
           truncatula]
          Length = 449

 Score =  203 bits (517), Expect = 1e-50
 Identities = 105/142 (73%), Positives = 106/142 (74%)
 Frame = -1

Query: 427 SRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAVFRGKMXXXXXXXXXXXXX 248
           SRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASA+FRGKM             
Sbjct: 275 SRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQ 334

Query: 247 XXXXXXXXXXXXXXXXXXXXXXXEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR 68
                                  EWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR
Sbjct: 335 NKNSSYFV---------------EWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR 379

Query: 67  RVSEQFTAMFRRKAFLHWYTGE 2
           RVSEQFTAMFRRKAFLHWYTGE
Sbjct: 380 RVSEQFTAMFRRKAFLHWYTGE 401


>sp|P29501.1|TBB2_PEA RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin
           gi|388254|emb|CAA38614.1| beta-tubulin 2 [Pisum sativum]
          Length = 447

 Score =  202 bits (515), Expect = 2e-50
 Identities = 104/142 (73%), Positives = 106/142 (74%)
 Frame = -1

Query: 427 SRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAVFRGKMXXXXXXXXXXXXX 248
           SRGSQQYRALSVPE+TQQMWDSKNMMCAADPRHGRYLTASA+FRGKM             
Sbjct: 273 SRGSQQYRALSVPEITQQMWDSKNMMCAADPRHGRYLTASAIFRGKMSTKEVDEQMMNVQ 332

Query: 247 XXXXXXXXXXXXXXXXXXXXXXXEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR 68
                                  EWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR
Sbjct: 333 NKNSSYFV---------------EWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR 377

Query: 67  RVSEQFTAMFRRKAFLHWYTGE 2
           RVSEQFTAMFRRKAFLHWYTGE
Sbjct: 378 RVSEQFTAMFRRKAFLHWYTGE 399


>gb|ACJ84610.1| unknown [Medicago truncatula]
          Length = 449

 Score =  202 bits (515), Expect = 2e-50
 Identities = 104/142 (73%), Positives = 106/142 (74%)
 Frame = -1

Query: 427 SRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAVFRGKMXXXXXXXXXXXXX 248
           SRGSQQYRALSVPE+TQQMWDSKNMMCAADPRHGRYLTASA+FRGKM             
Sbjct: 275 SRGSQQYRALSVPEITQQMWDSKNMMCAADPRHGRYLTASAIFRGKMSTKEVDEQMTNVQ 334

Query: 247 XXXXXXXXXXXXXXXXXXXXXXXEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR 68
                                  EWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR
Sbjct: 335 NKNSSYFV---------------EWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR 379

Query: 67  RVSEQFTAMFRRKAFLHWYTGE 2
           RVSEQFTAMFRRKAFLHWYTGE
Sbjct: 380 RVSEQFTAMFRRKAFLHWYTGE 401


>ref|XP_003604818.1| Tubulin beta chain [Medicago truncatula]
           gi|355505873|gb|AES87015.1| Tubulin beta chain [Medicago
           truncatula] gi|388519653|gb|AFK47888.1| unknown
           [Medicago truncatula]
          Length = 449

 Score =  202 bits (515), Expect = 2e-50
 Identities = 104/142 (73%), Positives = 106/142 (74%)
 Frame = -1

Query: 427 SRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAVFRGKMXXXXXXXXXXXXX 248
           SRGSQQYRALSVPE+TQQMWDSKNMMCAADPRHGRYLTASA+FRGKM             
Sbjct: 275 SRGSQQYRALSVPEITQQMWDSKNMMCAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQ 334

Query: 247 XXXXXXXXXXXXXXXXXXXXXXXEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR 68
                                  EWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR
Sbjct: 335 NKNSSYFV---------------EWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR 379

Query: 67  RVSEQFTAMFRRKAFLHWYTGE 2
           RVSEQFTAMFRRKAFLHWYTGE
Sbjct: 380 RVSEQFTAMFRRKAFLHWYTGE 401


>ref|XP_003559023.1| PREDICTED: tubulin beta-1 chain-like [Brachypodium distachyon]
          Length = 448

 Score =  201 bits (512), Expect = 4e-50
 Identities = 104/142 (73%), Positives = 106/142 (74%)
 Frame = -1

Query: 427 SRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAVFRGKMXXXXXXXXXXXXX 248
           SRGSQQYRAL+VPELTQQMWDSKNMMCAADPRHGRYLTASA+FRGKM             
Sbjct: 276 SRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQ 335

Query: 247 XXXXXXXXXXXXXXXXXXXXXXXEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR 68
                                  EWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR
Sbjct: 336 NKNSSYFV---------------EWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR 380

Query: 67  RVSEQFTAMFRRKAFLHWYTGE 2
           RVSEQFTAMFRRKAFLHWYTGE
Sbjct: 381 RVSEQFTAMFRRKAFLHWYTGE 402


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