BLASTX nr result

ID: Panax21_contig00004684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004684
         (1965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280526.1| PREDICTED: peroxisome biogenesis protein 22 ...   322   2e-85
ref|XP_002515731.1| conserved hypothetical protein [Ricinus comm...   311   4e-82
gb|AFK37395.1| unknown [Lotus japonicus]                              307   8e-81
ref|XP_003540319.1| PREDICTED: peroxisome biogenesis protein 22-...   303   8e-80
ref|XP_003543380.1| PREDICTED: peroxisome biogenesis protein 22-...   302   2e-79

>ref|XP_002280526.1| PREDICTED: peroxisome biogenesis protein 22 [Vitis vinifera]
           gi|297739312|emb|CBI28963.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  322 bits (825), Expect = 2e-85
 Identities = 171/216 (79%), Positives = 184/216 (85%), Gaps = 3/216 (1%)
 Frame = -1

Query: 639 SMMFSHLVWLQDSRSXXXXXXXXXXXVFTWRLLRSPGVPQRRQPKRQTPAPSNSGISNHS 460
           S +FS  +   DSRS           +FTWRLLRSP  PQRRQPKRQ PAPS+SG+S+ S
Sbjct: 26  SNLFSISLRNLDSRSVGALAGFAVAMIFTWRLLRSPSGPQRRQPKRQAPAPSSSGVSSQS 85

Query: 459 NANLISSGV--SSEGSRAQNVIDEFFHPVKPTLGQIVRQRLSEGRKVTCRLLGVILEESS 286
              L  SGV  SSE SRAQNVIDEFF PVKPTLGQIVRQ+LSEGRKVTCRLLGVILEESS
Sbjct: 86  TTTLAPSGVCSSSEDSRAQNVIDEFFQPVKPTLGQIVRQKLSEGRKVTCRLLGVILEESS 145

Query: 285 PEELQ-KQATVRSSVLEVLLEITKFCDLYLMERVLDDESEKKVVIALEDAGVFTSGGLVK 109
           PEELQ KQATVRSSVLEVLLEITKFCDLYLMERVLDDESE+KV++ALEDAGVFTSGGLVK
Sbjct: 146 PEELQAKQATVRSSVLEVLLEITKFCDLYLMERVLDDESERKVLLALEDAGVFTSGGLVK 205

Query: 108 DKVLFCSTQNGRTSFVRQLEPDWHIDTNPEIVSQLA 1
           DKVLFCST+ GR+SFVRQLEPDWHIDTNPE+VSQLA
Sbjct: 206 DKVLFCSTETGRSSFVRQLEPDWHIDTNPEVVSQLA 241


>ref|XP_002515731.1| conserved hypothetical protein [Ricinus communis]
           gi|223545168|gb|EEF46678.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 279

 Score =  311 bits (797), Expect = 4e-82
 Identities = 164/220 (74%), Positives = 182/220 (82%), Gaps = 2/220 (0%)
 Frame = -1

Query: 654 ICLHSSMMFSHLVWLQDSRSXXXXXXXXXXXVFTWRLLRSPGVPQRRQPKRQTPAPSNSG 475
           I +  S +FS   +  DSRS           VFTWR+LRSPG PQRRQPKRQ P  S S 
Sbjct: 26  ITVKMSNIFSISFYNLDSRSVGAIAGLAVAIVFTWRMLRSPGGPQRRQPKRQAPTSSTSV 85

Query: 474 ISNHSNANLISSGV--SSEGSRAQNVIDEFFHPVKPTLGQIVRQRLSEGRKVTCRLLGVI 301
           ++  SN+ L+ SGV  SSE  RAQNV+D FF PVKPTLGQIVRQ+LSEGRKVTCRLLGVI
Sbjct: 86  VTPQSNSTLMPSGVCSSSEDLRAQNVVDNFFQPVKPTLGQIVRQKLSEGRKVTCRLLGVI 145

Query: 300 LEESSPEELQKQATVRSSVLEVLLEITKFCDLYLMERVLDDESEKKVVIALEDAGVFTSG 121
           LEES+PEELQ QATV+SSVLEVLLEITKFCDLYLMERVLDDESE+KV+ ALE+AGVFTSG
Sbjct: 146 LEESTPEELQTQATVKSSVLEVLLEITKFCDLYLMERVLDDESEQKVLAALENAGVFTSG 205

Query: 120 GLVKDKVLFCSTQNGRTSFVRQLEPDWHIDTNPEIVSQLA 1
           GLVKDKVLFCST+NGR+SFVRQLEPDWHIDTNPEIVSQL+
Sbjct: 206 GLVKDKVLFCSTENGRSSFVRQLEPDWHIDTNPEIVSQLS 245


>gb|AFK37395.1| unknown [Lotus japonicus]
          Length = 264

 Score =  307 bits (786), Expect = 8e-81
 Identities = 156/204 (76%), Positives = 173/204 (84%), Gaps = 2/204 (0%)
 Frame = -1

Query: 606 DSRSXXXXXXXXXXXVFTWRLLRSPGVPQRRQPKRQTPAPSNSGISNHSNANLISSGVSS 427
           DS S            FTWRLLRSPG PQ RQ KRQT   SN G+S HSNA+++ SGV S
Sbjct: 27  DSHSIGAVAGLAIAIFFTWRLLRSPGEPQPRQRKRQTTTSSNPGVSTHSNASVVPSGVRS 86

Query: 426 EG--SRAQNVIDEFFHPVKPTLGQIVRQRLSEGRKVTCRLLGVILEESSPEELQKQATVR 253
               SRAQNV+DE F PVKPTLGQIVRQ+L+EGRKVTCRLLGVILEE+SPEELQKQ TV+
Sbjct: 87  PSGDSRAQNVVDELFQPVKPTLGQIVRQKLNEGRKVTCRLLGVILEETSPEELQKQVTVK 146

Query: 252 SSVLEVLLEITKFCDLYLMERVLDDESEKKVVIALEDAGVFTSGGLVKDKVLFCSTQNGR 73
           S+VLEVLLEITKFCDLYLMERVLDDESEK+V++ALEDAGVFTSGGLVKDKVLFCST+ GR
Sbjct: 147 STVLEVLLEITKFCDLYLMERVLDDESEKRVLVALEDAGVFTSGGLVKDKVLFCSTEIGR 206

Query: 72  TSFVRQLEPDWHIDTNPEIVSQLA 1
           +SFVRQLEPDWHID+NPEI+SQLA
Sbjct: 207 SSFVRQLEPDWHIDSNPEIISQLA 230


>ref|XP_003540319.1| PREDICTED: peroxisome biogenesis protein 22-like [Glycine max]
          Length = 278

 Score =  303 bits (777), Expect = 8e-80
 Identities = 159/215 (73%), Positives = 178/215 (82%), Gaps = 2/215 (0%)
 Frame = -1

Query: 639 SMMFSHLVWLQDSRSXXXXXXXXXXXVFTWRLLRSPGVPQRRQPKRQTPAPSNSGISNHS 460
           S +FS  +   D RS           VFTWRLLRSP   QRRQ KRQ P+ SN G++ HS
Sbjct: 30  SNLFSLSLHGLDIRSIGAVAGLAVAIVFTWRLLRSPSGSQRRQQKRQGPSSSNPGVTTHS 89

Query: 459 NANLISSGVSS--EGSRAQNVIDEFFHPVKPTLGQIVRQRLSEGRKVTCRLLGVILEESS 286
           N + + S   S  + SRAQNV+DEFF PVKPTLGQIVRQ+LSEGRKVTCRLLGVILEESS
Sbjct: 90  NVSDVPSDACSPSDDSRAQNVVDEFFQPVKPTLGQIVRQKLSEGRKVTCRLLGVILEESS 149

Query: 285 PEELQKQATVRSSVLEVLLEITKFCDLYLMERVLDDESEKKVVIALEDAGVFTSGGLVKD 106
           PEELQKQATVRSSVLEVLLE+TKFCDLYLMERVLDDESEK+V++ALE+AGVFTSG LVKD
Sbjct: 150 PEELQKQATVRSSVLEVLLEVTKFCDLYLMERVLDDESEKRVLVALEEAGVFTSGRLVKD 209

Query: 105 KVLFCSTQNGRTSFVRQLEPDWHIDTNPEIVSQLA 1
           KVLFCST+NGR+SFVRQLEPDWHID+NPEIV+QLA
Sbjct: 210 KVLFCSTENGRSSFVRQLEPDWHIDSNPEIVTQLA 244


>ref|XP_003543380.1| PREDICTED: peroxisome biogenesis protein 22-like [Glycine max]
          Length = 280

 Score =  302 bits (773), Expect = 2e-79
 Identities = 158/206 (76%), Positives = 175/206 (84%), Gaps = 4/206 (1%)
 Frame = -1

Query: 606 DSRSXXXXXXXXXXXVFTWRLLRSPGVPQRRQPKRQTPAPSNSGISNHSNAN---LISSG 436
           D RS           VFTWRLLRSP   QRRQ KRQ P+ SN G+  +SN+N   + S  
Sbjct: 41  DLRSIGAVAGLAVAIVFTWRLLRSPSGSQRRQQKRQGPSSSNPGVGTNSNSNASVVPSDA 100

Query: 435 VS-SEGSRAQNVIDEFFHPVKPTLGQIVRQRLSEGRKVTCRLLGVILEESSPEELQKQAT 259
            S S+ SRAQNV+DEFF PVKPTLGQIVRQ+LSEGRKVTCRLLGVILEESSPEELQKQAT
Sbjct: 101 CSPSDDSRAQNVVDEFFQPVKPTLGQIVRQKLSEGRKVTCRLLGVILEESSPEELQKQAT 160

Query: 258 VRSSVLEVLLEITKFCDLYLMERVLDDESEKKVVIALEDAGVFTSGGLVKDKVLFCSTQN 79
           VRSSVLEVLLE+TKFCDLYLMERVLDDESEK+V++ALE+AGVFTSGGLVKDKVLFCST+N
Sbjct: 161 VRSSVLEVLLEVTKFCDLYLMERVLDDESEKRVLVALEEAGVFTSGGLVKDKVLFCSTEN 220

Query: 78  GRTSFVRQLEPDWHIDTNPEIVSQLA 1
           GR+SFVRQLEPDWHID+NPEIV+QLA
Sbjct: 221 GRSSFVRQLEPDWHIDSNPEIVTQLA 246


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