BLASTX nr result

ID: Panax21_contig00004681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004681
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540274.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   312   5e-83
ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   311   8e-83
gb|ACU19018.1| unknown [Glycine max]                                  311   1e-82
ref|XP_003543397.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   309   5e-82
gb|ACM47318.1| putative zinc ion binding protein [Capsicum annuum]    290   2e-76

>ref|XP_003540274.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
          Length = 401

 Score =  312 bits (800), Expect = 5e-83
 Identities = 168/275 (61%), Positives = 194/275 (70%), Gaps = 7/275 (2%)
 Frame = -1

Query: 804 GIQEACDDACSICLEAFCENEPSTVTGCKHEFHLHCILEWCQRSSQCPMCWQPXXXXXXX 625
           GIQ+ACDDACSICLEAFC+++PSTVT CKHEFHL CILEWCQRSSQCPMC          
Sbjct: 35  GIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMC---------- 84

Query: 624 XXXXXXXXXXXXXXXXXMCWQPISLKEPSSQELLDAIERERSIRTTP-RNTTIFHHPTLG 448
                              WQPISLK+P+SQELL+A+ERER+ R  P RN TIFHHPTLG
Sbjct: 85  -------------------WQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPTLG 125

Query: 447 DFELQHLPVNFDDAELEERIIQHLAAAAAMGGRSRHIGRREGQRSRSSAQGRPRFLVFST 268
           DFELQHLPV   DA+LEERIIQHLAAAAAM GR+RHI RREGQR+RSSAQGRP FLVFST
Sbjct: 126 DFELQHLPVGASDADLEERIIQHLAAAAAM-GRARHIARREGQRNRSSAQGRPHFLVFST 184

Query: 267 --NNAPSALASPSQTQRGEGETAPAIMVGDPISPPTMGEESVQPN-TPPLSVQSVQASGS 97
             N+ P A AS S +QRG+ E  P I V +    P  GEES Q    PP+  + V ASGS
Sbjct: 185 NPNSPPMAPASSSPSQRGDDEPIPTIAVANLSPTPATGEESSQLTLVPPIQAEQVSASGS 244

Query: 96  ---RVLSENQHGASSTYRSPIQASPNSQDRAGPSE 1
               + +++Q  + +  RSP Q+SP+SQDRAGPSE
Sbjct: 245 GSTALATDHQGSSYNNRRSPNQSSPSSQDRAGPSE 279


>ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A [Vitis vinifera]
           gi|296084011|emb|CBI24399.3| unnamed protein product
           [Vitis vinifera]
          Length = 393

 Score =  311 bits (798), Expect = 8e-83
 Identities = 175/277 (63%), Positives = 197/277 (71%), Gaps = 9/277 (3%)
 Frame = -1

Query: 804 GIQEACDDACSICLEAFCENEPSTVTGCKHEFHLHCILEWCQRSSQCPMCWQPXXXXXXX 625
           GIQEACDDACSICLEAFC+++PSTVT CKHEFHL CILEWCQRSSQCPMC          
Sbjct: 26  GIQEACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMC---------- 75

Query: 624 XXXXXXXXXXXXXXXXXMCWQPISLKEPSSQELLDAIERERSIRTTP-RNTTIFHHPTLG 448
                              WQPISLK+P+SQELL+A+ERER+ R  P RN TIFHHPTLG
Sbjct: 76  -------------------WQPISLKDPTSQELLEAVERERTFRFNPSRNATIFHHPTLG 116

Query: 447 DFELQHLPVNFDDAELEERIIQHLAAAAAMGGRSRHIGRREGQRSRSSAQGRPRFLVFST 268
           DFELQHLPV  +DAELEERIIQHLAAAAAM GR+RHI RREGQR+RSSAQGRP+FLVFS 
Sbjct: 117 DFELQHLPVGANDAELEERIIQHLAAAAAM-GRARHIARREGQRTRSSAQGRPQFLVFSA 175

Query: 267 N-NAPSA-LASPSQTQRGEGETAPAIMVGDPISPPT-MGEESVQPNTPPLSVQ----SVQ 109
           + + P A  AS S  QRGE E APAI    P S PT +GEES +  T  LS Q    +  
Sbjct: 176 HPSTPQAGPASSSPAQRGEDEPAPAITAAMPSSLPTAVGEESSRLTTSQLSSQAEEITAS 235

Query: 108 ASGSRVLSENQHGASS-TYRSPIQASPNSQDRAGPSE 1
           ASGS + + NQHG SS   RSP Q+ P+ QD+AGPSE
Sbjct: 236 ASGSIIHTTNQHGTSSNNRRSPGQSLPSGQDKAGPSE 272


>gb|ACU19018.1| unknown [Glycine max]
          Length = 401

 Score =  311 bits (796), Expect = 1e-82
 Identities = 167/275 (60%), Positives = 193/275 (70%), Gaps = 7/275 (2%)
 Frame = -1

Query: 804 GIQEACDDACSICLEAFCENEPSTVTGCKHEFHLHCILEWCQRSSQCPMCWQPXXXXXXX 625
           GIQ+ACDDACSICLEAFC+++PSTVT CKHEFHL CILEWCQRSSQCPMC          
Sbjct: 35  GIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMC---------- 84

Query: 624 XXXXXXXXXXXXXXXXXMCWQPISLKEPSSQELLDAIERERSIRTTP-RNTTIFHHPTLG 448
                              WQPISLK+P+SQELL+A+ERER+ R  P RN TIFHHPTLG
Sbjct: 85  -------------------WQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPTLG 125

Query: 447 DFELQHLPVNFDDAELEERIIQHLAAAAAMGGRSRHIGRREGQRSRSSAQGRPRFLVFST 268
           DFELQHLPV   DA+LEERIIQHLAAAAAM GR+RHI RREGQR+RSSAQGRP FL FST
Sbjct: 126 DFELQHLPVGASDADLEERIIQHLAAAAAM-GRARHIARREGQRNRSSAQGRPHFLAFST 184

Query: 267 --NNAPSALASPSQTQRGEGETAPAIMVGDPISPPTMGEESVQPN-TPPLSVQSVQASGS 97
             N+ P A AS S +QRG+ E  P I V +    P  GEES Q    PP+  + V ASGS
Sbjct: 185 NPNSPPMAPASSSPSQRGDDEPIPTIAVANLSPTPATGEESSQLTLVPPIQAEQVSASGS 244

Query: 96  ---RVLSENQHGASSTYRSPIQASPNSQDRAGPSE 1
               + +++Q  + +  RSP Q+SP+SQDRAGPSE
Sbjct: 245 GSTALATDHQGSSYNNRRSPNQSSPSSQDRAGPSE 279


>ref|XP_003543397.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
          Length = 398

 Score =  309 bits (791), Expect = 5e-82
 Identities = 166/275 (60%), Positives = 193/275 (70%), Gaps = 7/275 (2%)
 Frame = -1

Query: 804 GIQEACDDACSICLEAFCENEPSTVTGCKHEFHLHCILEWCQRSSQCPMCWQPXXXXXXX 625
           GIQ+ACDDACSICLEAFC+++PSTVT CKHEFHL CILEWCQRSSQCPMC          
Sbjct: 32  GIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMC---------- 81

Query: 624 XXXXXXXXXXXXXXXXXMCWQPISLKEPSSQELLDAIERERSIRTTP-RNTTIFHHPTLG 448
                              WQPISLK+P+SQELL+A+ERER+ R  P RN TIFHHPTLG
Sbjct: 82  -------------------WQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPTLG 122

Query: 447 DFELQHLPVNFDDAELEERIIQHLAAAAAMGGRSRHIGRREGQRSRSSAQGRPRFLVFST 268
           DFELQHLPV   DA+LEERIIQHLAAAAAM GR+RH+ RREGQR+RSSAQGR  FLVFST
Sbjct: 123 DFELQHLPVGASDADLEERIIQHLAAAAAM-GRARHVARREGQRNRSSAQGRQHFLVFST 181

Query: 267 --NNAPSALASPSQTQRGEGETAPAIMVGDPISPPTMGEESVQPN-TPPLSVQSVQASGS 97
             N+ P A AS S +QRG+ E  P I V +    P  GEES QP    P+  + V ASGS
Sbjct: 182 HPNSPPMAPASSSPSQRGDDEPTPTIDVANLSPTPATGEESSQPTLVSPVQAEQVSASGS 241

Query: 96  ---RVLSENQHGASSTYRSPIQASPNSQDRAGPSE 1
               + +++Q  + +  RSP Q+SP+SQDRAGPSE
Sbjct: 242 GTTALATDHQGSSYNNRRSPNQSSPSSQDRAGPSE 276


>gb|ACM47318.1| putative zinc ion binding protein [Capsicum annuum]
          Length = 376

 Score =  290 bits (743), Expect = 2e-76
 Identities = 160/271 (59%), Positives = 181/271 (66%), Gaps = 3/271 (1%)
 Frame = -1

Query: 804 GIQEACDDACSICLEAFCENEPSTVTGCKHEFHLHCILEWCQRSSQCPMCWQPXXXXXXX 625
           GIQ+ACDDACSICLEAF +++PSTVTGCKHEFHL CILEWCQRSSQCPM WQ        
Sbjct: 21  GIQDACDDACSICLEAFSDSDPSTVTGCKHEFHLQCILEWCQRSSQCPMRWQ-------- 72

Query: 624 XXXXXXXXXXXXXXXXXMCWQPISLKEPSSQELLDAIERERSIRTTP-RNTTIFHHPTLG 448
                                P+SLK+PSSQELLDA+E ER+IR  P RNT IFHHPTLG
Sbjct: 73  ---------------------PLSLKDPSSQELLDAVEHERNIRMNPPRNTAIFHHPTLG 111

Query: 447 DFELQHLPVNFDDAELEERIIQHLAAAAAMGGRSRHIGRREGQRSRSSAQGRPRFLVFST 268
           DFELQHLP +  D+ELEERIIQHLAAAAAM GR+RHI RREG R RSSAQGRP FLVFST
Sbjct: 112 DFELQHLPASATDSELEERIIQHLAAAAAM-GRARHIARREGPRGRSSAQGRPHFLVFST 170

Query: 267 N-NAPSALASPSQTQRGEGETAPAIMVGDPISPPTMGEESVQPNTPPLSVQSVQASGS-R 94
           + NAP    + + TQR  GE  P ++V  P S    G    +P         V ASGS  
Sbjct: 171 HPNAPPPAGASTSTQRSGGEATPGVLVSGPNSANVSG----RPVVSSFPADPVPASGSGS 226

Query: 93  VLSENQHGASSTYRSPIQASPNSQDRAGPSE 1
             + NQ G SS  R   Q+SPN+QDRAGPS+
Sbjct: 227 NAAVNQLGTSSNNRRTPQSSPNNQDRAGPSD 257


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