BLASTX nr result
ID: Panax21_contig00004675
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00004675
(1286 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ... 261 4e-67
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g... 260 5e-67
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine... 244 5e-62
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine... 243 1e-61
ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2... 240 7e-61
>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 389
Score = 261 bits (666), Expect = 4e-67
Identities = 149/337 (44%), Positives = 198/337 (58%), Gaps = 6/337 (1%)
Frame = +3
Query: 294 MSNLLMDIVADILSRLPVKTLLQFRCVSKSWCTLIDSSSFIKMHLNKSVETNSNLSLIIK 473
MSNL ++++A+IL RL K LL RCVSK W TLIDS +FI +HLN S+E+ NLS+I+K
Sbjct: 1 MSNLPLEMIAEILCRLTAKKLLCCRCVSKRWRTLIDSPTFIYLHLNHSIESPCNLSIILK 60
Query: 474 NEDLYSVNFDLLDEAVQLDHPLKNPCITN---VLGSCDGLLLLGNIETGIAIWNPSTRKY 644
+ +LYS++FDLLD LDHPL C + +LGSC+GLL + NI IA+WNPS R +
Sbjct: 61 SSELYSLSFDLLDNIQPLDHPLM--CYNHGVKILGSCNGLLCICNIVDDIALWNPSIRAH 118
Query: 645 RKLPDSPIPTPKY--PKYFRYIKYGFGYDKVGEDYKVIRIVQFNCEEYDCSSSEVIVYSL 818
R +P P+ +Y R +GFGYD +DYK++RI QF + SEV V+SL
Sbjct: 119 RVVPYLPVELKRYFGMCSCRVSVFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKVFSL 178
Query: 819 KLNSWRRIQDFPYYLCXXXXXXXXXXXXXXXWVVKERRDPLLPKIIVAFDIGXXXXXXXX 998
+ NSWRRI D PY + W+V + D + IVA D+G
Sbjct: 179 RKNSWRRIADMPYCV-LYPGENGIYANGALHWLVSQDPDSTVADTIVALDLGVEDYHVVP 237
Query: 999 XXXXXDKGFQLDVEILGGCLCVTCSYFKDRLDIWVMKEYGVKESWTKLLSV-EPPSIRPF 1175
D + V +L GCL + +R+D+WVM+EY VKESW+KL SV I
Sbjct: 238 KPEFVDMNCNMGVGVLQGCLSLLAYARSERVDVWVMEEYMVKESWSKLFSVARLEVIGIL 297
Query: 1176 EYMKPLAYSKSGGEILLNYDDKRLVWYDLKEKLVKEV 1286
+KPLAYSKSG E+L+ +D+ L WYDLK K V V
Sbjct: 298 RSLKPLAYSKSGNEVLIEHDNVNLFWYDLKRKEVVNV 334
>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
gi|222854763|gb|EEE92310.1| f-box family protein [Populus
trichocarpa]
Length = 396
Score = 260 bits (665), Expect = 5e-67
Identities = 148/342 (43%), Positives = 205/342 (59%), Gaps = 13/342 (3%)
Frame = +3
Query: 294 MSNLLMDIVADILSRLPVKTLLQFRCVSKSWCTLIDSSSFIKMHLNKSVETNSNLSLIIK 473
MS L ++++A+IL RLP K LL R VSK WC LID +F+K+HL S++T+SNL +I++
Sbjct: 1 MSGLPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILR 60
Query: 474 NED-LYSVNFD---LLDEAV---QLDHPLKNPCITN---VLGSCDGLLLLGNIETGIAIW 623
++ ++F+ +L++ V +L+HPL C + VLGS +GLL + N+ IA+W
Sbjct: 61 TTSHVHYMDFEQNLVLNDCVTLKELNHPLM--CYNHGIKVLGSVNGLLCISNVVDDIAVW 118
Query: 624 NPSTRKYRKLPDSPIPTPKY--PKYFRYIKYGFGYDKVGEDYKVIRIVQFNCEEYDCSSS 797
NPSTRK+R +P PI +Y K +GFGYD V +DYK++RI QF S
Sbjct: 119 NPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFES 178
Query: 798 EVIVYSLKLNSWRRIQDFPYYLCXXXXXXXXXXXXXXXWVVKERRDPLLPKIIVAFDIGX 977
EV VYSL+ SWRRI D PY + WVV E + + I+VA D+G
Sbjct: 179 EVKVYSLRKQSWRRIGDMPYCV-HYPGANGVFANGALHWVVGENPESNVANIVVALDLGV 237
Query: 978 XXXXXXXXXXXXDKGFQLDVEILGGCLCVTCSYFKDRLDIWVMKEYGVKESWTKLLSVEP 1157
DK F +D+ +L GCLC ++ +R+D+W+MKEYGVKESWTKL SV
Sbjct: 238 EDYREVLQPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQ 297
Query: 1158 PSIRPF-EYMKPLAYSKSGGEILLNYDDKRLVWYDLKEKLVK 1280
+ F +KPLAYSKSG E+L+ +D+ L WYDLK K VK
Sbjct: 298 YEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVK 339
>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
Length = 394
Score = 244 bits (622), Expect = 5e-62
Identities = 133/335 (39%), Positives = 198/335 (59%), Gaps = 9/335 (2%)
Frame = +3
Query: 300 NLLMDIVADILSRLPVKTLLQFRCVSKSWCTLIDSSSFIKMHLNKSVETNSNLSLIIK-N 476
+L +++ +ILSRLPV++LL+FR SKSW +LIDS +HL +S+ SN SLI++ +
Sbjct: 4 HLPREVLTEILSRLPVRSLLRFRSTSKSWKSLIDSQHLNWLHLTRSLTLTSNTSLILRVD 63
Query: 477 EDLYSVNFDLLDEAVQLDHPLKNPCITN---VLGSCDGLLLLGNIETGIAIWNPSTRKYR 647
DLY NF LD V L+HPL C +N +LGSC+GLL + N+ IA WNPS R++R
Sbjct: 64 SDLYQTNFPTLDPPVSLNHPLM--CYSNSITLLGSCNGLLCISNVADDIAFWNPSLRQHR 121
Query: 648 KLPDSPIPTPKYPK--YFRYIKYGFGYDKVGEDYKVIRIVQFNCEEYDCSSSEVIVYSLK 821
LP P+P ++P F GFG+D DYK++RI F S+V +Y+L+
Sbjct: 122 ILPYLPVPRRRHPDTTLFAARVCGFGFDHKTRDYKLVRISYFVDLHDRSFDSQVKLYTLR 181
Query: 822 LNSWRRIQDFPYYLCXXXXXXXXXXXXXXXWVVKERRDPLLPKIIVAFDI--GXXXXXXX 995
N+W+ + PY LC WVV + +P P +I+AFD+
Sbjct: 182 ANAWKTLPSLPYALCCARTMGVFVGNSLH-WVVTRKLEPDQPDLIIAFDLTHDIFRELPL 240
Query: 996 XXXXXXDKGFQLDVEILGGCLCVTCSYFKDRLDIWVMKEYGVKESWTKLLSVEPP-SIRP 1172
D GF++D+ +LGG LC+T ++ K R+D+WVM+EY ++SW K+ ++E +R
Sbjct: 241 PDTGGVDGGFEIDLALLGGSLCMTVNFHKTRIDVWVMREYNRRDSWCKVFTLEESREMRS 300
Query: 1173 FEYMKPLAYSKSGGEILLNYDDKRLVWYDLKEKLV 1277
+ ++PL YS G ++LL +D KRL WYDL++K V
Sbjct: 301 LKCVRPLGYSSDGNKVLLEHDRKRLFWYDLEKKEV 335
>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
Length = 392
Score = 243 bits (619), Expect = 1e-61
Identities = 134/336 (39%), Positives = 195/336 (58%), Gaps = 10/336 (2%)
Frame = +3
Query: 300 NLLMDIVADILSRLPVKTLLQFRCVSKSWCTLIDSSSFIKMHLNKSVETNSNLSLIIK-N 476
+L ++V DILSRLP K+LL+FR SKSW +LIDS F +HL++S+ SN +LI++ +
Sbjct: 4 HLPREVVTDILSRLPAKSLLRFRSTSKSWKSLIDSQHFNSVHLSRSLSLTSNTTLILRLD 63
Query: 477 EDLYSVNFDLLDEAVQLDHPLKNPCITN---VLGSCDGLLLLGNIETGIAIWNPSTRKYR 647
DLY NF LD + L+HPL C +N +LGSC+GLL + N+ IA WNPS R++R
Sbjct: 64 SDLYQTNFPTLDPPLFLNHPLM--CYSNNITLLGSCNGLLCISNVADDIAFWNPSLRQHR 121
Query: 648 KLPDSPIPTPKY---PKYFRYIKYGFGYDKVGEDYKVIRIVQFNCEEYDCSSSEVIVYSL 818
LP P+P + F YGFG+D DYK++RI F + S+V +Y+L
Sbjct: 122 ILPSLPLPRRRLHPDTTLFAARVYGFGFDHTSPDYKLVRISYFVDLQDRSFDSQVKLYTL 181
Query: 819 KLNSWRRIQDFPYYLCXXXXXXXXXXXXXXXWVVKERRDPLLPKIIVAFDI--GXXXXXX 992
+ N+W+ + PY LC WVV + +P P +IVAFD+
Sbjct: 182 RANAWKTLPSMPYALC-CARTMGVFVGNSLHWVVTRKLEPDQPDLIVAFDLTHEIFTELP 240
Query: 993 XXXXXXXDKGFQLDVEILGGCLCVTCSYFKDRLDIWVMKEYGVKESWTKLLSVEPP-SIR 1169
GF++DV +LG LC+T ++ ++D+WVM+EY +SW KL ++E +R
Sbjct: 241 LPDTGGVGGGFEIDVALLGDSLCMTVNFHNSKMDVWVMREYNRGDSWCKLFTLEESRELR 300
Query: 1170 PFEYMKPLAYSKSGGEILLNYDDKRLVWYDLKEKLV 1277
F+ ++PL YS G ++LL +D KRL WYDL +K V
Sbjct: 301 SFKCLRPLGYSSDGNKVLLEHDRKRLCWYDLGKKEV 336
>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
predicted protein [Populus trichocarpa]
Length = 419
Score = 240 bits (612), Expect = 7e-61
Identities = 139/358 (38%), Positives = 201/358 (56%), Gaps = 27/358 (7%)
Frame = +3
Query: 294 MSNLLMDIVADILSRLPVKTLLQFRCVSKSWCTLIDSSSFIKMHLNKSVETNSNLSLIIK 473
MS + +I+ DI +LPVK+LL+FR +SK C+LID FIK HL S+ SN S+I+K
Sbjct: 1 MSKIPHEIITDIFQQLPVKSLLRFRSLSKPICSLIDGPDFIKFHLYHSITAKSNHSVILK 60
Query: 474 NEDLYSVNFDLLDEAVQL-DHPLKNPCITNVLGSCDGLLLLGNIETGIAIWNPSTRKYRK 650
DL++V+FD L +AV++ HPL T V+GS +GL+ L + E +A++N STR+++K
Sbjct: 61 EWDLFTVDFDTLSDAVEVKHHPLYAAGGTEVIGSVNGLVFLRHSERNLAVYNLSTREWKK 120
Query: 651 LPDSPIPTPKYPKYFRYIKYGFGYDKVGEDYKVIRIVQFNCEEYDCSSS----------- 797
I P+ Y+ YGFGYD VG+DYKV+R+ QF E+
Sbjct: 121 CFVVEIKPPRRDLITGYVYYGFGYDSVGDDYKVVRMAQFVREDEGGGGGGGYGDGGGGLG 180
Query: 798 ---EVIVYSLKLNSWRRIQDFP---------YYLCXXXXXXXXXXXXXXXWVVKERRDPL 941
EV VYSLK + W++I+D P ++ W++ +RR
Sbjct: 181 CEYEVRVYSLKNDKWKKIEDLPICLKLLSKQFFHVLHRRGYGVFAGHALHWIIPQRRQLG 240
Query: 942 LPKIIVAFDIGXXXXXXXXXXXXXDKG--FQLDVEILGGCLCVTCSYFKDRLDIWVMKEY 1115
+ ++ FDI KG FQ+DV +L G LCV C+Y +D+WVM+EY
Sbjct: 241 IRDCVLGFDIRNDKFFELPQPNYESKGMSFQVDVGVLEGNLCVMCNYEYVCVDVWVMREY 300
Query: 1116 GVKESWTKLLSVEPPS-IRPFEYMKPLAYSKSGGEILLNYDDKRLVWYDLKEKLVKEV 1286
G+KESW K+ SV+ I F +++PL YSK GG++LL +D++LVWYD K K K V
Sbjct: 301 GMKESWCKMFSVQGIKWIGAFMFLRPLIYSKDGGKVLLEVNDEKLVWYDWKNKHAKVV 358