BLASTX nr result

ID: Panax21_contig00004669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004669
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521816.1| radical sam protein, putative [Ricinus commu...    66   7e-09
ref|XP_004162857.1| PREDICTED: threonylcarbamoyladenosine tRNA m...    66   1e-08
ref|XP_004141564.1| PREDICTED: threonylcarbamoyladenosine tRNA m...    66   1e-08
ref|XP_002327268.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-08
ref|XP_002268292.2| PREDICTED: CDK5 regulatory subunit-associate...    64   3e-08

>ref|XP_002521816.1| radical sam protein, putative [Ricinus communis]
           gi|223539029|gb|EEF40626.1| radical sam protein,
           putative [Ricinus communis]
          Length = 630

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 33/55 (60%), Positives = 38/55 (69%)
 Frame = -2

Query: 379 GTPAARMKKSLKYYSEEAESWTDICFESFTAYDGMEGRIERIWITEIAIDGNHLV 215
           GTPAARMKK      ++        FE+FT Y+GMEGR+ERIWITEIA DG HLV
Sbjct: 392 GTPAARMKKVPSNIVKKRSRELTAVFEAFTPYNGMEGRVERIWITEIATDGIHLV 446


>ref|XP_004162857.1| PREDICTED: threonylcarbamoyladenosine tRNA
           methylthiotransferase-like [Cucumis sativus]
          Length = 635

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 33/55 (60%), Positives = 38/55 (69%)
 Frame = -2

Query: 379 GTPAARMKKSLKYYSEEAESWTDICFESFTAYDGMEGRIERIWITEIAIDGNHLV 215
           GTPAARMKK      ++        FE+FT Y+GMEGR+ERIWITEIA DG HLV
Sbjct: 394 GTPAARMKKVPSAIVKKRSRELTSVFEAFTPYNGMEGRVERIWITEIAADGIHLV 448


>ref|XP_004141564.1| PREDICTED: threonylcarbamoyladenosine tRNA
           methylthiotransferase-like [Cucumis sativus]
          Length = 635

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 33/55 (60%), Positives = 38/55 (69%)
 Frame = -2

Query: 379 GTPAARMKKSLKYYSEEAESWTDICFESFTAYDGMEGRIERIWITEIAIDGNHLV 215
           GTPAARMKK      ++        FE+FT Y+GMEGR+ERIWITEIA DG HLV
Sbjct: 394 GTPAARMKKVPSAIVKKRSRELTSVFEAFTPYNGMEGRVERIWITEIAADGIHLV 448


>ref|XP_002327268.1| predicted protein [Populus trichocarpa] gi|222835638|gb|EEE74073.1|
           predicted protein [Populus trichocarpa]
          Length = 612

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 32/55 (58%), Positives = 38/55 (69%)
 Frame = -2

Query: 379 GTPAARMKKSLKYYSEEAESWTDICFESFTAYDGMEGRIERIWITEIAIDGNHLV 215
           GTPAARMKK      ++        FE+FT Y+GMEGR+ERIWIT+IA DG HLV
Sbjct: 374 GTPAARMKKVPSNIVKQRSRELTSVFEAFTPYNGMEGRVERIWITDIAADGIHLV 428


>ref|XP_002268292.2| PREDICTED: CDK5 regulatory subunit-associated protein 1-like 1-like
           [Vitis vinifera]
          Length = 622

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 32/55 (58%), Positives = 38/55 (69%)
 Frame = -2

Query: 379 GTPAARMKKSLKYYSEEAESWTDICFESFTAYDGMEGRIERIWITEIAIDGNHLV 215
           GTPAARMKK      ++        FE+FT Y+GMEGR+ERIWI+EIA DG HLV
Sbjct: 385 GTPAARMKKVPSAVVKKRSRELTSIFEAFTPYNGMEGRVERIWISEIATDGIHLV 439


Top