BLASTX nr result

ID: Panax21_contig00004666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004666
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275301.2| PREDICTED: uncharacterized tRNA-binding prot...   229   8e-58
emb|CAN60565.1| hypothetical protein VITISV_013997 [Vitis vinifera]   223   5e-56
ref|XP_002520877.1| methionyl-tRNA synthetase, putative [Ricinus...   202   1e-49
ref|XP_002325488.1| predicted protein [Populus trichocarpa] gi|2...   186   5e-45
ref|XP_003526802.1| PREDICTED: probable methionyl-tRNA synthetas...   186   8e-45

>ref|XP_002275301.2| PREDICTED: uncharacterized tRNA-binding protein C30C2.04-like
           [Vitis vinifera] gi|297736480|emb|CBI25351.3| unnamed
           protein product [Vitis vinifera]
          Length = 392

 Score =  229 bits (583), Expect = 8e-58
 Identities = 129/278 (46%), Positives = 171/278 (61%), Gaps = 1/278 (0%)
 Frame = +2

Query: 62  SIVLNRKRNIVSALCKRLSIDPKVFLDDRA-SDIKSLCVSILKSSQSASAPENNDELLNW 238
           ++VL RK++IVS+LCK LS+DPK+FLD    +DIKSLC +ILKSS    AP+N+DE+  W
Sbjct: 9   NVVLRRKQSIVSSLCKHLSLDPKIFLDSIVENDIKSLCANILKSS--GRAPKNSDEVSKW 66

Query: 239 ISFAENYPVDSEACFRILNGLNGDLIQKSVIVGGGIEPSEADVIVFSAVHSSVIGISESD 418
           ISFAE+YPVDS+ACF  L+ +N +L +KSV++G G++PSEADVIVFS +H  VIG+  ++
Sbjct: 67  ISFAESYPVDSKACFGALHVINEELAEKSVLMGDGLKPSEADVIVFSLLHPFVIGLPNTE 126

Query: 419 REKVPHVMRWMDYIQGKEEIGELFEQILLKKVSFEPPXXXXXXXXXXXXXXXXXXXXXXX 598
           R+K+PH++RWM+YIQ KE  GELF +ILL+    E P                       
Sbjct: 127 RQKLPHLVRWMEYIQSKENFGELFPKILLENDVIELPKP--------------------- 165

Query: 599 XXXXXXVLNAVAKVEAATNTKKTLQGAKDASSSEVGPNTKKNADVKKVAGDNXXXXXXXX 778
                     V K+EA  N KKT+Q  K+A ++E  PN+KK+  VKKV G+N        
Sbjct: 166 --------KIVVKLEADPNAKKTVQSTKNADNTEANPNSKKSDVVKKVTGNN-------A 210

Query: 779 XXXXXXXXXXXXXXXXXXXXSVSLLKIQVGLIRKAWKH 892
                               S+SLL IQVGLIRKAWKH
Sbjct: 211 AAEQKKKLPEKEAVEKDKEVSISLLNIQVGLIRKAWKH 248


>emb|CAN60565.1| hypothetical protein VITISV_013997 [Vitis vinifera]
          Length = 523

 Score =  223 bits (568), Expect = 5e-56
 Identities = 129/293 (44%), Positives = 170/293 (58%), Gaps = 16/293 (5%)
 Frame = +2

Query: 62  SIVLNRKRNIVSALCKRLSIDPKVFLDDRA-SDIKSLCVSILKSSQSASAPENNDELLNW 238
           ++VL RK++IVS+LCK LS+DPK+FLD    +DIKSLC +ILKSS    AP+N+DE+  W
Sbjct: 96  NVVLRRKQSIVSSLCKHLSLDPKIFLDSIVENDIKSLCANILKSS--GRAPKNSDEVSKW 153

Query: 239 ISFAENYPVDSEACFRILNGLNGDLIQKSVIVGGGIEPSEADVIVFSAVHSSVIGISESD 418
           ISFAE+YPVDS ACF  L+ +N +L +KSV+ G G++PSEADVIVFS +H  VIG+  ++
Sbjct: 154 ISFAESYPVDSXACFGALHVINEELAEKSVLXGDGLKPSEADVIVFSLLHPFVIGLPNTE 213

Query: 419 REKVPHVMRWMDYIQGKEEIGELFEQILLKKVSFEPPXXXXXXXXXXXXXXXXXXXXXXX 598
           R+K+PH++RWM+YIQ KE  GELF +ILL+    E P                       
Sbjct: 214 RQKLPHLVRWMEYIQSKENFGELFPKILLENDVIELPVEDGSNRKEEFVFTSVDVILYWL 273

Query: 599 XXXXXXVLNA---------------VAKVEAATNTKKTLQGAKDASSSEVGPNTKKNADV 733
                 +                  V K+EA  N KKT+Q  K+A ++E  PN+KK+  V
Sbjct: 274 NTDSARMFKCKVAEAFFIAIKKPKIVVKLEADPNAKKTVQSTKNADNTEANPNSKKSDVV 333

Query: 734 KKVAGDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSLLKIQVGLIRKAWKH 892
           KKV G+N                            S+SLL IQVGLIRKAWKH
Sbjct: 334 KKVTGNN-------AAAEQKKKLPEKEAVEKDKEVSISLLNIQVGLIRKAWKH 379


>ref|XP_002520877.1| methionyl-tRNA synthetase, putative [Ricinus communis]
           gi|223540008|gb|EEF41586.1| methionyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 391

 Score =  202 bits (513), Expect = 1e-49
 Identities = 124/284 (43%), Positives = 157/284 (55%), Gaps = 1/284 (0%)
 Frame = +2

Query: 44  MASSNDSIVLNRKRNIVSALCKRLSIDPKVFLDD-RASDIKSLCVSILKSSQSASAPENN 220
           MA++N+SI L R + I SAL K LS+     L + R  DIKSL V+ILKSS   S  + N
Sbjct: 1   MAAANESITLKRNQLIASALSKHLSLHSGTSLSECRGDDIKSLYVNILKSSGKWSQQKEN 60

Query: 221 DELLNWISFAENYPVDSEACFRILNGLNGDLIQKSVIVGGGIEPSEADVIVFSAVHSSVI 400
           DE++ WI FAE++PVD+ ACF  LNGLN  L  KSV++G G+ PSEADVIVFS +HSSVI
Sbjct: 61  DEVMKWIDFAESFPVDTSACFNALNGLNQHLALKSVLLGNGVTPSEADVIVFSVIHSSVI 120

Query: 401 GISESDREKVPHVMRWMDYIQGKEEIGELFEQILLKKVSFEPPXXXXXXXXXXXXXXXXX 580
           G+S S++EK+  VMRWMDYIQ KE   +  E+ILL+K +FEP                  
Sbjct: 121 GLSHSEKEKLTQVMRWMDYIQHKETFVDPAERILLEKPAFEP------------------ 162

Query: 581 XXXXXXXXXXXXVLNAVAKVEAATNTKKTLQGAKDASSSEVGPNTKKNADVKKVAGDNXX 760
                          AVAK+E  +N KK++Q  K+    +   + KK+   KKV      
Sbjct: 163 -----------LSTKAVAKIEVDSNVKKSMQSTKNTEKPDAEHSRKKSDAGKKVT----- 206

Query: 761 XXXXXXXXXXXXXXXXXXXXXXXXXXSVSLLKIQVGLIRKAWKH 892
                                     SVSLL IQVGLIRKAWKH
Sbjct: 207 ---EKESVQEKKKPAQTEPAEKEKEVSVSLLNIQVGLIRKAWKH 247


>ref|XP_002325488.1| predicted protein [Populus trichocarpa] gi|222862363|gb|EEE99869.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  186 bits (473), Expect = 5e-45
 Identities = 118/286 (41%), Positives = 154/286 (53%), Gaps = 1/286 (0%)
 Frame = +2

Query: 38  EAMASSNDSIVLNRKRNIVSALCKRLSIDPKVFLDDRAS-DIKSLCVSILKSSQSASAPE 214
           E    +  S+ L RK+ I SAL K LS+ P+    D    DIKSL ++ILKSS   S  +
Sbjct: 34  EKREEARRSMGLQRKQIISSALSKHLSLSPEAPSGDLGEYDIKSLYLNILKSSGKRSPSK 93

Query: 215 NNDELLNWISFAENYPVDSEACFRILNGLNGDLIQKSVIVGGGIEPSEADVIVFSAVHSS 394
            ++E++ WISFAE +P+DS  CF  L+GLN DL   SV++G G+ PSEAD+IVFS +HSS
Sbjct: 94  ESEEVMKWISFAEIFPIDSPTCFDALSGLNKDLALNSVLLGNGLTPSEADIIVFSVIHSS 153

Query: 395 VIGISESDREKVPHVMRWMDYIQGKEEIGELFEQILLKKVSFEPPXXXXXXXXXXXXXXX 574
           VIG+S  +REK+ HVMRWMDYIQ K + G+LFE++LL+K +FE                 
Sbjct: 154 VIGLSHLEREKLVHVMRWMDYIQNKVDFGKLFEKVLLEKGAFE----------------- 196

Query: 575 XXXXXXXXXXXXXXVLNAVAKVEAATNTKKTLQGAKDASSSEVGPNTKKNADVKKVAGDN 754
                          +   AK E  TN KKT++  K+   SE   + KK+ +  K  G  
Sbjct: 197 ------------LQGIKGDAKSEIDTNAKKTVENTKNKEKSEADLSMKKSDN--KSTGKK 242

Query: 755 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSLLKIQVGLIRKAWKH 892
                                       SVSLL IQVGLIRKAWKH
Sbjct: 243 -------ESAQEKKKPSETEAGEKDKELSVSLLNIQVGLIRKAWKH 281


>ref|XP_003526802.1| PREDICTED: probable methionyl-tRNA synthetase-like [Glycine max]
          Length = 390

 Score =  186 bits (471), Expect = 8e-45
 Identities = 114/276 (41%), Positives = 154/276 (55%), Gaps = 1/276 (0%)
 Frame = +2

Query: 68  VLNRKRNIVSALCKRLSIDPKVFLDDRA-SDIKSLCVSILKSSQSASAPENNDELLNWIS 244
           V +R +++V AL K LS+DP V   D + SDIKSL ++I+  + S     ++DE+L W++
Sbjct: 4   VESRSKSVVLALSKYLSLDPSVVPADTSDSDIKSLYLNII--AVSGHGVNHSDEVLKWVA 61

Query: 245 FAENYPVDSEACFRILNGLNGDLIQKSVIVGGGIEPSEADVIVFSAVHSSVIGISESDRE 424
           FAE +PV  +ACF  LN LN +L +KSV++G G++PSEADVIV+S +HSS+I +S++++E
Sbjct: 62  FAEAFPVALDACFENLNRLNDELSEKSVLLGNGLKPSEADVIVYSVIHSSLINLSDTNKE 121

Query: 425 KVPHVMRWMDYIQGKEEIGELFEQILLKKVSFEPPXXXXXXXXXXXXXXXXXXXXXXXXX 604
           K+PHV+RWMDYIQ K+E   LFE+ILL+K  FEPP                         
Sbjct: 122 KLPHVLRWMDYIQHKQEFVGLFEKILLQKPGFEPP------------------------- 156

Query: 605 XXXXVLNAVAKVEAATNTKKTLQGAKDASSSEVGPNTKKNADVKKVAGDNXXXXXXXXXX 784
               V   V  VEA   + KT Q  K+ + SEV  +  KN    K  G            
Sbjct: 157 ----VTQPVGAVEADLKSNKTEQSVKNVNKSEVDSSKDKNKAEGKATGGK--STGDKEPT 210

Query: 785 XXXXXXXXXXXXXXXXXXSVSLLKIQVGLIRKAWKH 892
                             SVSLL IQVGLIRKAWKH
Sbjct: 211 KAKAKPADKEVAEKENEVSVSLLNIQVGLIRKAWKH 246


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