BLASTX nr result
ID: Panax21_contig00004658
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00004658 (630 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containin... 204 8e-51 emb|CBI27906.3| unnamed protein product [Vitis vinifera] 204 8e-51 ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containin... 192 6e-47 ref|XP_002514115.1| nucleic acid binding protein, putative [Rici... 185 5e-45 ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|2... 185 5e-45 >ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Vitis vinifera] Length = 607 Score = 204 bits (520), Expect = 8e-51 Identities = 100/137 (72%), Positives = 113/137 (82%) Frame = +1 Query: 1 VVFFEWVYIRATHANLQAIPIPSSRESSVLEIFNLAAERMGFKFVVLKSGISSEGRNLLR 180 VVFFEW++ R THAN+QA+PIP SR S+V IF LAAE++GF+FV KS SEGR LR Sbjct: 469 VVFFEWIFKRGTHANIQAVPIPLSRASAVKNIFILAAEKLGFQFVTTKSNNDSEGRKSLR 528 Query: 181 TQFDRKCSLFYVELPGGTILSHAIEESEKFPAQFGREVLAGLLNMADRADWRNCKLSKGE 360 QFD K S FYVELP GTILSHAIE++EKFP QFGREVLAGLLNMADRADWRNCK SK + Sbjct: 529 AQFDDKISFFYVELPDGTILSHAIEDNEKFPVQFGREVLAGLLNMADRADWRNCKQSKED 588 Query: 361 EIKMAENFKNGFEKFDP 411 E+KMAE FKN F+KFDP Sbjct: 589 EMKMAEVFKNQFKKFDP 605 >emb|CBI27906.3| unnamed protein product [Vitis vinifera] Length = 593 Score = 204 bits (520), Expect = 8e-51 Identities = 100/137 (72%), Positives = 113/137 (82%) Frame = +1 Query: 1 VVFFEWVYIRATHANLQAIPIPSSRESSVLEIFNLAAERMGFKFVVLKSGISSEGRNLLR 180 VVFFEW++ R THAN+QA+PIP SR S+V IF LAAE++GF+FV KS SEGR LR Sbjct: 455 VVFFEWIFKRGTHANIQAVPIPLSRASAVKNIFILAAEKLGFQFVTTKSNNDSEGRKSLR 514 Query: 181 TQFDRKCSLFYVELPGGTILSHAIEESEKFPAQFGREVLAGLLNMADRADWRNCKLSKGE 360 QFD K S FYVELP GTILSHAIE++EKFP QFGREVLAGLLNMADRADWRNCK SK + Sbjct: 515 AQFDDKISFFYVELPDGTILSHAIEDNEKFPVQFGREVLAGLLNMADRADWRNCKQSKED 574 Query: 361 EIKMAENFKNGFEKFDP 411 E+KMAE FKN F+KFDP Sbjct: 575 EMKMAEVFKNQFKKFDP 591 >ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Cucumis sativus] gi|449489882|ref|XP_004158448.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Cucumis sativus] Length = 606 Score = 192 bits (487), Expect = 6e-47 Identities = 97/139 (69%), Positives = 108/139 (77%) Frame = +1 Query: 1 VVFFEWVYIRATHANLQAIPIPSSRESSVLEIFNLAAERMGFKFVVLKSGISSEGRNLLR 180 VVFFEWV R+THANLQA+PIPSSR V IF++AAE++GFKFV+ KS SEGR LR Sbjct: 468 VVFFEWVSKRSTHANLQAVPIPSSRAHVVQNIFDMAAEKLGFKFVISKSDAPSEGRKSLR 527 Query: 181 TQFDRKCSLFYVELPGGTILSHAIEESEKFPAQFGREVLAGLLNMADRADWRNCKLSKGE 360 TQFD S FY ELP LSH IEE+E FPAQFGREVLAGLLNMAD+ADWRNC SK E Sbjct: 528 TQFDSDHSFFYAELPECVTLSHVIEENEIFPAQFGREVLAGLLNMADKADWRNCAHSKEE 587 Query: 361 EIKMAENFKNGFEKFDPNR 417 E KMAE+FK FE FDPN+ Sbjct: 588 ETKMAEDFKIRFENFDPNK 606 >ref|XP_002514115.1| nucleic acid binding protein, putative [Ricinus communis] gi|223546571|gb|EEF48069.1| nucleic acid binding protein, putative [Ricinus communis] Length = 606 Score = 185 bits (470), Expect = 5e-45 Identities = 86/136 (63%), Positives = 107/136 (78%) Frame = +1 Query: 4 VFFEWVYIRATHANLQAIPIPSSRESSVLEIFNLAAERMGFKFVVLKSGISSEGRNLLRT 183 + FEW R THANLQA+P+PSSR ++V +IFN+AAE++GFKFV +K +S+GR LRT Sbjct: 469 ILFEWASKRGTHANLQAVPVPSSRAAAVQDIFNMAAEKLGFKFVTMKFNNNSDGRKWLRT 528 Query: 184 QFDRKCSLFYVELPGGTILSHAIEESEKFPAQFGREVLAGLLNMADRADWRNCKLSKGEE 363 QFDR S FYVELP GT+LSH+++E+E FPAQFGREVLAGLLNM +RADWR C LSK EE Sbjct: 529 QFDRNYSFFYVELPDGTVLSHSVKENESFPAQFGREVLAGLLNMPERADWRTCTLSKEEE 588 Query: 364 IKMAENFKNGFEKFDP 411 KM + K FE+ +P Sbjct: 589 TKMIDELKKQFEELNP 604 >ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|222833259|gb|EEE71736.1| predicted protein [Populus trichocarpa] Length = 606 Score = 185 bits (470), Expect = 5e-45 Identities = 89/142 (62%), Positives = 112/142 (78%), Gaps = 4/142 (2%) Frame = +1 Query: 4 VFFEWVYIRATHANLQAIPIPSSRESSVLEIFNLAAERMGFKFVVLKSGI----SSEGRN 171 + FEW+ R++HAN+Q +P+PS++ ++V +I NLAAE++GFKFVV+K + SS+GR Sbjct: 465 ILFEWISKRSSHANIQVVPVPSTKAAAVQDICNLAAEKLGFKFVVMKFILAVNNSSDGRE 524 Query: 172 LLRTQFDRKCSLFYVELPGGTILSHAIEESEKFPAQFGREVLAGLLNMADRADWRNCKLS 351 LRTQFDR S FYVEL GTILSH++EE+E FPAQFGREVLAGLLNM +RADWRNC L Sbjct: 525 WLRTQFDRNYSFFYVELTEGTILSHSVEENENFPAQFGREVLAGLLNMPERADWRNCALG 584 Query: 352 KGEEIKMAENFKNGFEKFDPNR 417 K EE KMAE FK FE+ DPN+ Sbjct: 585 KDEETKMAEEFKKQFEELDPNQ 606