BLASTX nr result

ID: Panax21_contig00004656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004656
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515343.1| Coatomer subunit beta, putative [Ricinus com...   244   4e-63
ref|XP_002282410.1| PREDICTED: coatomer subunit beta-1 [Vitis vi...   243   2e-62
ref|XP_002324951.1| predicted protein [Populus trichocarpa] gi|2...   241   6e-62
ref|XP_002330796.1| predicted protein [Populus trichocarpa] gi|2...   236   1e-60
ref|XP_002330795.1| predicted protein [Populus trichocarpa] gi|2...   236   1e-60

>ref|XP_002515343.1| Coatomer subunit beta, putative [Ricinus communis]
           gi|223545287|gb|EEF46792.1| Coatomer subunit beta,
           putative [Ricinus communis]
          Length = 819

 Score =  244 bits (624), Expect = 4e-63
 Identities = 120/130 (92%), Positives = 125/130 (96%)
 Frame = -2

Query: 392 QHPNEYIRGVTLRFLCRLNEVEIIEPLIPSILANLEHRHQFIRRNAILAVMAIYKLPQGE 213
           QHPNEYIRGVTLRFLCRLNE EIIEPLIPS+L NLEHRH +IRRNAILAVM+IYKLPQGE
Sbjct: 106 QHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLEHRHPYIRRNAILAVMSIYKLPQGE 165

Query: 212 HLLVDAPEMIEKVLSTEQDQSAKRNAFLMLFNCAQDRAVNYLLTHVDRVSEWGELLQMVV 33
            LLVDAPEMIEKVLSTEQDQSAKRNAFLMLF CAQDRA+NYLLTHVD+VSEWGELLQMVV
Sbjct: 166 QLLVDAPEMIEKVLSTEQDQSAKRNAFLMLFTCAQDRAINYLLTHVDKVSEWGELLQMVV 225

Query: 32  LELIRKVCRT 3
           LELIRKVCRT
Sbjct: 226 LELIRKVCRT 235


>ref|XP_002282410.1| PREDICTED: coatomer subunit beta-1 [Vitis vinifera]
           gi|147845891|emb|CAN82167.1| hypothetical protein
           VITISV_023269 [Vitis vinifera]
          Length = 948

 Score =  243 bits (619), Expect = 2e-62
 Identities = 120/130 (92%), Positives = 123/130 (94%)
 Frame = -2

Query: 392 QHPNEYIRGVTLRFLCRLNEVEIIEPLIPSILANLEHRHQFIRRNAILAVMAIYKLPQGE 213
           QHPNEYIRGVTLRFLCRLNE EIIEPLIPS+L NLEHRH FIRRNAILAVM+IYKLPQGE
Sbjct: 106 QHPNEYIRGVTLRFLCRLNEAEIIEPLIPSVLQNLEHRHPFIRRNAILAVMSIYKLPQGE 165

Query: 212 HLLVDAPEMIEKVLSTEQDQSAKRNAFLMLFNCAQDRAVNYLLTHVDRVSEWGELLQMVV 33
            LLVDAPEMIEKVLSTEQD SAKRNAFLMLF CAQDRA+NYLLTHVDRV EWGELLQMVV
Sbjct: 166 QLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTCAQDRAINYLLTHVDRVPEWGELLQMVV 225

Query: 32  LELIRKVCRT 3
           LELIRKVCRT
Sbjct: 226 LELIRKVCRT 235


>ref|XP_002324951.1| predicted protein [Populus trichocarpa] gi|222866385|gb|EEF03516.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score =  241 bits (614), Expect = 6e-62
 Identities = 119/130 (91%), Positives = 124/130 (95%)
 Frame = -2

Query: 392 QHPNEYIRGVTLRFLCRLNEVEIIEPLIPSILANLEHRHQFIRRNAILAVMAIYKLPQGE 213
           QHPNEYIRGVTLRFLCRLNE EIIEPLIPS+L NLEHRH FIRRNAILAVM+IYKLPQGE
Sbjct: 106 QHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLEHRHPFIRRNAILAVMSIYKLPQGE 165

Query: 212 HLLVDAPEMIEKVLSTEQDQSAKRNAFLMLFNCAQDRAVNYLLTHVDRVSEWGELLQMVV 33
            LLVDAPEMIEKVLSTEQDQSAKRNAFLMLF C QDRA+NYLLT+VD+VSEWGELLQMVV
Sbjct: 166 QLLVDAPEMIEKVLSTEQDQSAKRNAFLMLFTCDQDRAINYLLTNVDKVSEWGELLQMVV 225

Query: 32  LELIRKVCRT 3
           LELIRKVCRT
Sbjct: 226 LELIRKVCRT 235


>ref|XP_002330796.1| predicted protein [Populus trichocarpa] gi|222872598|gb|EEF09729.1|
           predicted protein [Populus trichocarpa]
          Length = 690

 Score =  236 bits (602), Expect = 1e-60
 Identities = 118/130 (90%), Positives = 121/130 (93%)
 Frame = -2

Query: 392 QHPNEYIRGVTLRFLCRLNEVEIIEPLIPSILANLEHRHQFIRRNAILAVMAIYKLPQGE 213
           QHPNEYIRGVTLRFLCRLNE EIIEPLIPS+L NLEHRH FIRRNAI AVMAIYKLP GE
Sbjct: 106 QHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLEHRHPFIRRNAISAVMAIYKLPHGE 165

Query: 212 HLLVDAPEMIEKVLSTEQDQSAKRNAFLMLFNCAQDRAVNYLLTHVDRVSEWGELLQMVV 33
            LLVDAPEMIEKVLSTE DQSAKRNAFLMLFNC QDRA NYLLT+VD+VSEWGELLQMVV
Sbjct: 166 QLLVDAPEMIEKVLSTELDQSAKRNAFLMLFNCDQDRATNYLLTNVDKVSEWGELLQMVV 225

Query: 32  LELIRKVCRT 3
           LELIRKVCRT
Sbjct: 226 LELIRKVCRT 235


>ref|XP_002330795.1| predicted protein [Populus trichocarpa] gi|222872597|gb|EEF09728.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score =  236 bits (602), Expect = 1e-60
 Identities = 118/130 (90%), Positives = 121/130 (93%)
 Frame = -2

Query: 392 QHPNEYIRGVTLRFLCRLNEVEIIEPLIPSILANLEHRHQFIRRNAILAVMAIYKLPQGE 213
           QHPNEYIRGVTLRFLCRLNE EIIEPLIPS+L NLEHRH FIRRNAI AVMAIYKLP GE
Sbjct: 106 QHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLEHRHPFIRRNAISAVMAIYKLPHGE 165

Query: 212 HLLVDAPEMIEKVLSTEQDQSAKRNAFLMLFNCAQDRAVNYLLTHVDRVSEWGELLQMVV 33
            LLVDAPEMIEKVLSTE DQSAKRNAFLMLFNC QDRA NYLLT+VD+VSEWGELLQMVV
Sbjct: 166 QLLVDAPEMIEKVLSTELDQSAKRNAFLMLFNCDQDRATNYLLTNVDKVSEWGELLQMVV 225

Query: 32  LELIRKVCRT 3
           LELIRKVCRT
Sbjct: 226 LELIRKVCRT 235


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