BLASTX nr result

ID: Panax21_contig00004643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004643
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing ...   358   9e-97
ref|XP_004141224.1| PREDICTED: PAP-associated domain-containing ...   354   1e-95
ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|2...   347   2e-93
ref|XP_002524282.1| nucleic acid binding protein, putative [Rici...   343   2e-92
gb|AEL98706.1| Nucleotidyltransferase family protein, partial [S...   342   5e-92

>ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing protein 5-like [Vitis
           vinifera] gi|302143015|emb|CBI20310.3| unnamed protein
           product [Vitis vinifera]
          Length = 497

 Score =  358 bits (918), Expect = 9e-97
 Identities = 179/255 (70%), Positives = 209/255 (81%)
 Frame = +2

Query: 2   EQALRNAAVECVFDVIKYIWPGCEVEVFGSFETGLYLPSSDIDVVIMGSNIRSPQVGLMA 181
           EQ+ RNAA+E VF+VI+YIWP C+VEVFGSF+TGLYLP+SDIDVVI+GS+I++PQ+GL A
Sbjct: 122 EQSARNAAIESVFNVIRYIWPNCKVEVFGSFKTGLYLPTSDIDVVILGSDIKTPQIGLYA 181

Query: 182 LSRALSQRGVGKKIQVIAKARVPIIKFVEKRSGISFDISFDVHNGPKAAEFMKGAISKWP 361
           LSRALSQ+G+ KKIQVIAKARVPIIKF+EKRS ++FDISFDV NGPKAAE+++ AISKWP
Sbjct: 182 LSRALSQKGIAKKIQVIAKARVPIIKFIEKRSSVAFDISFDVENGPKAAEYIQDAISKWP 241

Query: 362 PLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLRSLNEFQAYPEHNLGILLVNF 541
           PLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAML++L E+ A  EHNLG+LLVNF
Sbjct: 242 PLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLQNLQEWNASVEHNLGVLLVNF 301

Query: 542 FDIYXXXXXXXXXXXXXXXXXXXXXXXXNTSDVGVSCNGAGIFFFKNSKGFLIKGRPALI 721
           FD Y                        NT D+GV+CNG G FF K++KGF+ KG+  LI
Sbjct: 302 FDFY--------------------GRKLNTVDIGVTCNGPGTFFLKSTKGFVNKGQKFLI 341

Query: 722 SIEDPQAPDNDIGKN 766
           SIEDPQ P NDIGKN
Sbjct: 342 SIEDPQLPGNDIGKN 356


>ref|XP_004141224.1| PREDICTED: PAP-associated domain-containing protein 5-like [Cucumis
           sativus]
          Length = 544

 Score =  354 bits (909), Expect = 1e-95
 Identities = 178/255 (69%), Positives = 206/255 (80%)
 Frame = +2

Query: 2   EQALRNAAVECVFDVIKYIWPGCEVEVFGSFETGLYLPSSDIDVVIMGSNIRSPQVGLMA 181
           E+  R++AVE VF V+K+IWP C+VEVFGSF+TGLYLP+SDIDVVI+GS I  PQ+GL A
Sbjct: 143 ERVARDSAVERVFSVVKHIWPHCKVEVFGSFQTGLYLPTSDIDVVILGSGIPKPQLGLQA 202

Query: 182 LSRALSQRGVGKKIQVIAKARVPIIKFVEKRSGISFDISFDVHNGPKAAEFMKGAISKWP 361
           LSRALSQ+G+ KKIQVI KARVPIIKF+EK+SGISFDISFDV NGPKAA+F+KGA+SKWP
Sbjct: 203 LSRALSQKGIAKKIQVIGKARVPIIKFIEKQSGISFDISFDVQNGPKAADFIKGAVSKWP 262

Query: 362 PLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLRSLNEFQAYPEHNLGILLVNF 541
           PLRPLCLILKVFLQQRELNEVYSGG+GSYALL ML+AML+S+N   +  EHNLG+LLV+F
Sbjct: 263 PLRPLCLILKVFLQQRELNEVYSGGLGSYALLTMLMAMLQSINVPPSSLEHNLGVLLVHF 322

Query: 542 FDIYXXXXXXXXXXXXXXXXXXXXXXXXNTSDVGVSCNGAGIFFFKNSKGFLIKGRPALI 721
           FD Y                        NTSDVGVSCN  GIFF K+ +GF+ KGRP L+
Sbjct: 323 FDFY--------------------GRKLNTSDVGVSCNAGGIFFSKSYRGFMTKGRPCLL 362

Query: 722 SIEDPQAPDNDIGKN 766
           SIEDPQAPDNDIGKN
Sbjct: 363 SIEDPQAPDNDIGKN 377


>ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|222869762|gb|EEF06893.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score =  347 bits (890), Expect = 2e-93
 Identities = 178/255 (69%), Positives = 202/255 (79%)
 Frame = +2

Query: 2   EQALRNAAVECVFDVIKYIWPGCEVEVFGSFETGLYLPSSDIDVVIMGSNIRSPQVGLMA 181
           EQA R  AV CVFDVIKYIWP C+VEVFGSF TGLYLP+SDIDVVI+GS ++SPQ+GL A
Sbjct: 142 EQASRAEAVRCVFDVIKYIWPNCKVEVFGSFRTGLYLPTSDIDVVILGSGLKSPQIGLNA 201

Query: 182 LSRALSQRGVGKKIQVIAKARVPIIKFVEKRSGISFDISFDVHNGPKAAEFMKGAISKWP 361
           LSRALSQ+GV KKIQVIA+ARVPI+KFVEKRSG+SFDISFDV+ GP AAEF+K AISKWP
Sbjct: 202 LSRALSQKGVAKKIQVIARARVPIVKFVEKRSGVSFDISFDVNGGPIAAEFIKNAISKWP 261

Query: 362 PLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLRSLNEFQAYPEHNLGILLVNF 541
            LRPLCLILKVFLQQRELNEVYSGGI SYALLAML+AML++  E QA  E NLG+LL++F
Sbjct: 262 ELRPLCLILKVFLQQRELNEVYSGGISSYALLAMLMAMLQNHRECQASLERNLGLLLIHF 321

Query: 542 FDIYXXXXXXXXXXXXXXXXXXXXXXXXNTSDVGVSCNGAGIFFFKNSKGFLIKGRPALI 721
           FD Y                        NT++VGVSC G G FF K +KGF+  GRP LI
Sbjct: 322 FDFY--------------------GRKLNTTNVGVSCKGTGTFFSKRTKGFMNNGRPFLI 361

Query: 722 SIEDPQAPDNDIGKN 766
           +IEDPQAP+NDIGKN
Sbjct: 362 AIEDPQAPENDIGKN 376


>ref|XP_002524282.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536473|gb|EEF38121.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 526

 Score =  343 bits (880), Expect = 2e-92
 Identities = 177/255 (69%), Positives = 199/255 (78%)
 Frame = +2

Query: 2   EQALRNAAVECVFDVIKYIWPGCEVEVFGSFETGLYLPSSDIDVVIMGSNIRSPQVGLMA 181
           E+  RN AV+CVFDVIKYIWP C+VEVFGS++TGLYLP+SDIDVVI  S I++PQ+GL A
Sbjct: 142 EEDARNTAVKCVFDVIKYIWPNCKVEVFGSYKTGLYLPTSDIDVVIFRSGIKNPQIGLQA 201

Query: 182 LSRALSQRGVGKKIQVIAKARVPIIKFVEKRSGISFDISFDVHNGPKAAEFMKGAISKWP 361
           LSRALSQ+G+ KKIQVIAKARVPI+KFVEKRSG+SFDISFDV NGPKAAEF+K A+ KWP
Sbjct: 202 LSRALSQKGIAKKIQVIAKARVPIVKFVEKRSGVSFDISFDVDNGPKAAEFIKDAVRKWP 261

Query: 362 PLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLRSLNEFQAYPEHNLGILLVNF 541
            LRPL LILKVFLQQRELNEVYSGGIGSYALL ML+A+L+      A  EHNLG+LLV F
Sbjct: 262 ALRPLSLILKVFLQQRELNEVYSGGIGSYALLTMLMAVLK------ASSEHNLGVLLVYF 315

Query: 542 FDIYXXXXXXXXXXXXXXXXXXXXXXXXNTSDVGVSCNGAGIFFFKNSKGFLIKGRPALI 721
           FD Y                        NT+DVGVSC GAG FF K  KGF+ KGRP LI
Sbjct: 316 FDFY--------------------GRKLNTTDVGVSCKGAGTFFSKRKKGFMNKGRPFLI 355

Query: 722 SIEDPQAPDNDIGKN 766
           +IEDPQAPDNDIGKN
Sbjct: 356 AIEDPQAPDNDIGKN 370


>gb|AEL98706.1| Nucleotidyltransferase family protein, partial [Silene latifolia]
          Length = 501

 Score =  342 bits (877), Expect = 5e-92
 Identities = 174/251 (69%), Positives = 197/251 (78%)
 Frame = +2

Query: 14  RNAAVECVFDVIKYIWPGCEVEVFGSFETGLYLPSSDIDVVIMGSNIRSPQVGLMALSRA 193
           RN+A++ V DVIKYIWP C VEVFGS+ TGLYLPSSDIDVVI+ SNI+SPQ+GL ALSRA
Sbjct: 144 RNSAIQRVSDVIKYIWPNCRVEVFGSYRTGLYLPSSDIDVVILDSNIKSPQIGLQALSRA 203

Query: 194 LSQRGVGKKIQVIAKARVPIIKFVEKRSGISFDISFDVHNGPKAAEFMKGAISKWPPLRP 373
           LSQ+G+ KKIQVI KARVPIIKFVEK + + FD+SFDV NGPKAAE++K  IS+ PPLRP
Sbjct: 204 LSQKGIAKKIQVIGKARVPIIKFVEKVTDVQFDVSFDVDNGPKAAEYIKDVISRLPPLRP 263

Query: 374 LCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLRSLNEFQAYPEHNLGILLVNFFDIY 553
           LCLILKVFLQQRELNEVYSGGIGSYALLAMLIAML+S+NE Q YPEHNLG+LLV FF+ Y
Sbjct: 264 LCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLKSVNEGQRYPEHNLGVLLVKFFEFY 323

Query: 554 XXXXXXXXXXXXXXXXXXXXXXXXNTSDVGVSCNGAGIFFFKNSKGFLIKGRPALISIED 733
                                   NT DVGVSCNG G FF K+ KGF   GRP LI IED
Sbjct: 324 --------------------AHKLNTWDVGVSCNGRGTFFLKSRKGFQQNGRPFLICIED 363

Query: 734 PQAPDNDIGKN 766
           PQ+P+NDIGK+
Sbjct: 364 PQSPENDIGKS 374


Top