BLASTX nr result
ID: Panax21_contig00004641
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00004641
(1122 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269042.2| PREDICTED: 40S ribosomal protein S8-like [Vi... 186 7e-45
ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine... 185 2e-44
gb|ACU16800.1| unknown [Glycine max] 185 2e-44
ref|XP_003532158.1| PREDICTED: 40S ribosomal protein S8-like [Gl... 184 3e-44
ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Gl... 184 3e-44
>ref|XP_002269042.2| PREDICTED: 40S ribosomal protein S8-like [Vitis vinifera]
gi|147772691|emb|CAN64937.1| hypothetical protein
VITISV_011515 [Vitis vinifera]
Length = 221
Score = 186 bits (473), Expect = 7e-45
Identities = 96/124 (77%), Positives = 96/124 (77%)
Frame = +3
Query: 132 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTXXXXXXXXXXXKWRALR 311
MGISRDSMH YELGRQPANTKLSSNKT KWRALR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 312 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 491
LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 492 DIGR 503
DIGR
Sbjct: 121 DIGR 124
Score = 124 bits (312), Expect = 3e-26
Identities = 57/68 (83%), Positives = 65/68 (95%)
Frame = +1
Query: 631 HVLRKIEKRQEDRKIDAHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYVKKLQ 810
HVLRK+EKRQ+D ++D HIEEQFG GRLLA+ISSRPGQCGRADGYILEGKELEFY+KK+Q
Sbjct: 151 HVLRKLEKRQQDHRLDPHIEEQFGSGRLLASISSRPGQCGRADGYILEGKELEFYMKKIQ 210
Query: 811 RKKGKGAA 834
RKKGKG+A
Sbjct: 211 RKKGKGSA 218
>ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine max]
Length = 219
Score = 185 bits (469), Expect = 2e-44
Identities = 95/124 (76%), Positives = 96/124 (77%)
Frame = +3
Query: 132 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTXXXXXXXXXXXKWRALR 311
MGISRDSMH YELGRQPANTKLSSNKT KWRALR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 312 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 491
LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 492 DIGR 503
+IGR
Sbjct: 121 EIGR 124
Score = 128 bits (322), Expect = 2e-27
Identities = 60/68 (88%), Positives = 66/68 (97%)
Frame = +1
Query: 631 HVLRKIEKRQEDRKIDAHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYVKKLQ 810
H+ RK+EKRQ+DRK+DAHIEEQFGGGRLLA ISSRPGQCGRADGYILEGKELEFY+KKLQ
Sbjct: 152 HLQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQ 211
Query: 811 RKKGKGAA 834
+KKGKGAA
Sbjct: 212 KKKGKGAA 219
>gb|ACU16800.1| unknown [Glycine max]
Length = 243
Score = 185 bits (469), Expect = 2e-44
Identities = 95/124 (76%), Positives = 96/124 (77%)
Frame = +3
Query: 132 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTXXXXXXXXXXXKWRALR 311
MGISRDSMH YELGRQPANTKLSSNKT KWRALR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWGKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 312 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 491
LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 492 DIGR 503
+IGR
Sbjct: 121 EIGR 124
Score = 125 bits (315), Expect = 1e-26
Identities = 63/90 (70%), Positives = 71/90 (78%)
Frame = +1
Query: 631 HVLRKIEKRQEDRKIDAHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYVKKLQ 810
H+ RK+EKRQ+DRK+DAHIEEQFGGGRLLA ISSRPGQCGRADGYILEGKELEFY+KKLQ
Sbjct: 152 HLQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQ 211
Query: 811 RKKGKGAAA*NFVT*MELQFRTFLFSVLLF 900
+KKGKG + L F FL+ F
Sbjct: 212 KKKGKGCC-------LILVFPIFLYGFSCF 234
>ref|XP_003532158.1| PREDICTED: 40S ribosomal protein S8-like [Glycine max]
Length = 219
Score = 184 bits (468), Expect = 3e-44
Identities = 94/124 (75%), Positives = 96/124 (77%)
Frame = +3
Query: 132 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTXXXXXXXXXXXKWRALR 311
MGISRDSMH YELGRQPANTKLSSNKT KWRALR
Sbjct: 1 MGISRDSMHKRRATGGKKKSWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 312 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 491
LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 492 DIGR 503
++GR
Sbjct: 121 EVGR 124
Score = 123 bits (308), Expect = 1e-25
Identities = 57/68 (83%), Positives = 65/68 (95%)
Frame = +1
Query: 631 HVLRKIEKRQEDRKIDAHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYVKKLQ 810
HV+RK+EKR+++R +D HIEEQFGGGRLLA ISSRPGQCGRADGYILEGKELEFY+KKLQ
Sbjct: 152 HVVRKLEKRKQNRVLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQ 211
Query: 811 RKKGKGAA 834
+KKGKGAA
Sbjct: 212 KKKGKGAA 219
>ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Glycine max]
Length = 220
Score = 184 bits (468), Expect = 3e-44
Identities = 94/124 (75%), Positives = 96/124 (77%)
Frame = +3
Query: 132 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTXXXXXXXXXXXKWRALR 311
MGISRDSMH YELGRQPANTKLSSNKT KWRALR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 312 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 491
LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61 LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 492 DIGR 503
+IGR
Sbjct: 121 EIGR 124
Score = 129 bits (325), Expect = 1e-27
Identities = 61/68 (89%), Positives = 66/68 (97%)
Frame = +1
Query: 631 HVLRKIEKRQEDRKIDAHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYVKKLQ 810
HV RK+EKRQ+DRK+DAHIEEQFGGGRLLA ISSRPGQCGRADGYILEGKELEFY+KKLQ
Sbjct: 153 HVQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQ 212
Query: 811 RKKGKGAA 834
+KKGKGAA
Sbjct: 213 KKKGKGAA 220