BLASTX nr result

ID: Panax21_contig00004640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004640
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Gl...   300   2e-79
ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine...   300   2e-79
gb|ACU19111.1| unknown [Glycine max]                                  298   6e-79
gb|ACI15738.1| putative 40S ribosomal protein S8-like protein [P...   298   8e-79
emb|CBI39377.3| unnamed protein product [Vitis vinifera]              297   1e-78

>ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Glycine max]
          Length = 220

 Score =  300 bits (769), Expect = 2e-79
 Identities = 156/199 (78%), Positives = 163/199 (81%), Gaps = 2/199 (1%)
 Frame = -3

Query: 741 RKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKTRILD 562
           RKKRKYELGRQPANTKLSSNKT          VKWRALRLDTGNYSWGSEAVTRKTR+LD
Sbjct: 22  RKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRVLD 81

Query: 561 VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR--XXXXXXXXXXXXXXX 388
           VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IGR                 
Sbjct: 82  VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTAAKKETAEEGGDA 141

Query: 387 XXXXXXXXKSNHVQRKIEKRQEDRKIDAHIEEQFGGGRLLAAISSRPGQCGRSDGYILEG 208
                   KSNHVQRK+EKRQ+DRK+DAHIEEQFGGGRLLA ISSRPGQCGR+DGYILEG
Sbjct: 142 AAAAEEAKKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEG 201

Query: 207 KELEFYMKKLQRKKGKGAA 151
           KELEFYMKKLQ+KKGKGAA
Sbjct: 202 KELEFYMKKLQKKKGKGAA 220


>ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine max]
          Length = 219

 Score =  300 bits (768), Expect = 2e-79
 Identities = 156/198 (78%), Positives = 163/198 (82%), Gaps = 1/198 (0%)
 Frame = -3

Query: 741 RKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKTRILD 562
           RKKRKYELGRQPANTKLSSNKT          VKWRALRLDTGNYSWGSEAVTRKTRILD
Sbjct: 22  RKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILD 81

Query: 561 VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR-XXXXXXXXXXXXXXXX 385
           VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IGR                 
Sbjct: 82  VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTAAKKETAEEGAAA 141

Query: 384 XXXXXXXKSNHVQRKIEKRQEDRKIDAHIEEQFGGGRLLAAISSRPGQCGRSDGYILEGK 205
                  KSNH+QRK+EKRQ+DRK+DAHIEEQFGGGRLLA ISSRPGQCGR+DGYILEGK
Sbjct: 142 VAVEEAKKSNHLQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGK 201

Query: 204 ELEFYMKKLQRKKGKGAA 151
           ELEFYMKKLQ+KKGKGAA
Sbjct: 202 ELEFYMKKLQKKKGKGAA 219


>gb|ACU19111.1| unknown [Glycine max]
          Length = 220

 Score =  298 bits (764), Expect = 6e-79
 Identities = 155/199 (77%), Positives = 163/199 (81%), Gaps = 2/199 (1%)
 Frame = -3

Query: 741 RKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKTRILD 562
           RKKRKYELGRQPA+TKLSSNKT          VKWRALRLDTGNYSWGSEAVTRKTR+LD
Sbjct: 22  RKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRVLD 81

Query: 561 VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR--XXXXXXXXXXXXXXX 388
           VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IGR                 
Sbjct: 82  VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTAAKKETAEEGGDA 141

Query: 387 XXXXXXXXKSNHVQRKIEKRQEDRKIDAHIEEQFGGGRLLAAISSRPGQCGRSDGYILEG 208
                   KSNHVQRK+EKRQ+DRK+DAHIEEQFGGGRLLA ISSRPGQCGR+DGYILEG
Sbjct: 142 VAATEEAKKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEG 201

Query: 207 KELEFYMKKLQRKKGKGAA 151
           KELEFYMKKLQ+KKGKGAA
Sbjct: 202 KELEFYMKKLQKKKGKGAA 220


>gb|ACI15738.1| putative 40S ribosomal protein S8-like protein [Picrorhiza kurrooa]
          Length = 216

 Score =  298 bits (763), Expect = 8e-79
 Identities = 155/197 (78%), Positives = 162/197 (82%)
 Frame = -3

Query: 741 RKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKTRILD 562
           RKKRKYELGRQPANTKLSSNKT          VKWRALRLDTGN+SWGSEAVTRKTRILD
Sbjct: 22  RKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRILD 81

Query: 561 VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXX 382
           VVYNASNNELVRTQTLVK AI+QVDAAPFKQWYLQHYGV+IGR                 
Sbjct: 82  VVYNASNNELVRTQTLVKGAIIQVDAAPFKQWYLQHYGVEIGR--KKKTAAKKEGEEAEV 139

Query: 381 XXXXXXKSNHVQRKIEKRQEDRKIDAHIEEQFGGGRLLAAISSRPGQCGRSDGYILEGKE 202
                 KSNHVQRK+EKRQE+RKID+HIEEQF GGRLLAAISSRPGQCGR+DGYILEGKE
Sbjct: 140 VAEEVKKSNHVQRKLEKRQEERKIDSHIEEQFSGGRLLAAISSRPGQCGRADGYILEGKE 199

Query: 201 LEFYMKKLQRKKGKGAA 151
           LEFYMKKLQRKKGKGAA
Sbjct: 200 LEFYMKKLQRKKGKGAA 216


>emb|CBI39377.3| unnamed protein product [Vitis vinifera]
          Length = 214

 Score =  297 bits (761), Expect = 1e-78
 Identities = 152/197 (77%), Positives = 160/197 (81%)
 Frame = -3

Query: 741 RKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKTRILD 562
           RKKRKYELGRQPANTKLSSNKT          VKWRALRLDTGNYSWGSEAVTRKTRILD
Sbjct: 15  RKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILD 74

Query: 561 VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXX 382
           VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR                 
Sbjct: 75  VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTTAKKETTEEGEGG 134

Query: 381 XXXXXXKSNHVQRKIEKRQEDRKIDAHIEEQFGGGRLLAAISSRPGQCGRSDGYILEGKE 202
                 KSNHV RK+EKRQ+D ++D HIEEQFG GRLLA+ISSRPGQCGR+DGYILEGKE
Sbjct: 135 ATEETKKSNHVLRKLEKRQQDHRLDPHIEEQFGSGRLLASISSRPGQCGRADGYILEGKE 194

Query: 201 LEFYMKKLQRKKGKGAA 151
           LEFYMKK+QRKKGKG+A
Sbjct: 195 LEFYMKKIQRKKGKGSA 211


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