BLASTX nr result
ID: Panax21_contig00004637
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00004637 (397 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAH03328.1| chloroplast protein 12 [Fagus crenata] 127 1e-27 ref|XP_002275043.1| PREDICTED: calvin cycle protein CP12-like [V... 125 5e-27 ref|XP_002320298.1| predicted protein [Populus trichocarpa] gi|2... 120 1e-25 gb|ABK96294.1| unknown [Populus trichocarpa x Populus deltoides]... 119 2e-25 gb|AFK34703.1| unknown [Medicago truncatula] 118 6e-25 >dbj|BAH03328.1| chloroplast protein 12 [Fagus crenata] Length = 130 Score = 127 bits (318), Expect = 1e-27 Identities = 69/94 (73%), Positives = 79/94 (84%), Gaps = 5/94 (5%) Frame = -3 Query: 395 RPTQF-LAGR-MMVGTVAATPD-LSNKVAESIKEAQEICAGGDPASGECIAAWDEVEELS 225 RPT F AGR M V V+A P+ +S+KVAESIK+A+E CAG DPASGEC+AAWDEVEELS Sbjct: 38 RPTLFGYAGRSMQVRPVSAAPEKISDKVAESIKDAEEACAG-DPASGECVAAWDEVEELS 96 Query: 224 AAVSHAKEKKK--DPLEEYCKDNMETDECRTYED 129 AA SHA++KKK DPLEEYCKDN ET+ECRTYED Sbjct: 97 AAASHARDKKKGSDPLEEYCKDNPETEECRTYED 130 >ref|XP_002275043.1| PREDICTED: calvin cycle protein CP12-like [Vitis vinifera] Length = 128 Score = 125 bits (313), Expect = 5e-27 Identities = 65/92 (70%), Positives = 74/92 (80%), Gaps = 3/92 (3%) Frame = -3 Query: 395 RPTQFLAGRMMVGTVAATPD-LSNKVAESIKEAQEICAGGDPASGECIAAWDEVEELSAA 219 RP++F AGRM V VAA PD +S KV ESIK A+E C+ DPASGEC+AAWDEVEELSAA Sbjct: 38 RPSRFGAGRMCVRPVAAAPDSISEKVVESIKNAEEKCSD-DPASGECVAAWDEVEELSAA 96 Query: 218 VSHAKEKKK--DPLEEYCKDNMETDECRTYED 129 SHA++KKK DPLE YCKDN E +ECRTYED Sbjct: 97 ASHARDKKKESDPLETYCKDNPEDEECRTYED 128 >ref|XP_002320298.1| predicted protein [Populus trichocarpa] gi|222861071|gb|EEE98613.1| predicted protein [Populus trichocarpa] Length = 126 Score = 120 bits (301), Expect = 1e-25 Identities = 64/92 (69%), Positives = 72/92 (78%), Gaps = 3/92 (3%) Frame = -3 Query: 395 RPTQFLAGRMMVGTVAATPD-LSNKVAESIKEAQEICAGGDPASGECIAAWDEVEELSAA 219 R Q +GR+ V V A P+ +S KV +SIKEA+E C+G D ASGEC AAWDEVEELSAA Sbjct: 36 RSYQLGSGRVQVRPVRAAPEGISEKVEKSIKEAEEACSG-DAASGECAAAWDEVEELSAA 94 Query: 218 VSHAKEKKK--DPLEEYCKDNMETDECRTYED 129 SHAK+KKK DPLEEYCKDN ETDECRTYED Sbjct: 95 ASHAKDKKKGSDPLEEYCKDNPETDECRTYED 126 >gb|ABK96294.1| unknown [Populus trichocarpa x Populus deltoides] gi|118488989|gb|ABK96302.1| unknown [Populus trichocarpa x Populus deltoides] Length = 127 Score = 119 bits (299), Expect = 2e-25 Identities = 63/89 (70%), Positives = 71/89 (79%), Gaps = 3/89 (3%) Frame = -3 Query: 386 QFLAGRMMVGTVAATPD-LSNKVAESIKEAQEICAGGDPASGECIAAWDEVEELSAAVSH 210 Q +GR+ V V A P+ +S KV +SIKEA+E C+G D ASGEC AAWDEVEELSAA SH Sbjct: 40 QLGSGRVQVRPVRAAPEGISEKVEKSIKEAEEACSG-DAASGECAAAWDEVEELSAAASH 98 Query: 209 AKEKKK--DPLEEYCKDNMETDECRTYED 129 AK+KKK DPLEEYCKDN ETDECRTYED Sbjct: 99 AKDKKKGSDPLEEYCKDNPETDECRTYED 127 >gb|AFK34703.1| unknown [Medicago truncatula] Length = 131 Score = 118 bits (295), Expect = 6e-25 Identities = 59/86 (68%), Positives = 71/86 (82%), Gaps = 3/86 (3%) Frame = -3 Query: 377 AGRMM-VGTVAATPDLSNKVAESIKEAQEICAGGDPASGECIAAWDEVEELSAAVSHAKE 201 +GRM+ + V A+PD++ KV ESIK A+E CAG D SGEC+AAWDEVEELSAA SHA++ Sbjct: 47 SGRMVSIRPVQASPDITGKVEESIKSAEETCAG-DATSGECVAAWDEVEELSAAASHARD 105 Query: 200 KKK--DPLEEYCKDNMETDECRTYED 129 KKK DPLEEYCKDN ETDECRTY++ Sbjct: 106 KKKTSDPLEEYCKDNPETDECRTYDN 131