BLASTX nr result

ID: Panax21_contig00004637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004637
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH03328.1| chloroplast protein 12 [Fagus crenata]                127   1e-27
ref|XP_002275043.1| PREDICTED: calvin cycle protein CP12-like [V...   125   5e-27
ref|XP_002320298.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
gb|ABK96294.1| unknown [Populus trichocarpa x Populus deltoides]...   119   2e-25
gb|AFK34703.1| unknown [Medicago truncatula]                          118   6e-25

>dbj|BAH03328.1| chloroplast protein 12 [Fagus crenata]
          Length = 130

 Score =  127 bits (318), Expect = 1e-27
 Identities = 69/94 (73%), Positives = 79/94 (84%), Gaps = 5/94 (5%)
 Frame = -3

Query: 395 RPTQF-LAGR-MMVGTVAATPD-LSNKVAESIKEAQEICAGGDPASGECIAAWDEVEELS 225
           RPT F  AGR M V  V+A P+ +S+KVAESIK+A+E CAG DPASGEC+AAWDEVEELS
Sbjct: 38  RPTLFGYAGRSMQVRPVSAAPEKISDKVAESIKDAEEACAG-DPASGECVAAWDEVEELS 96

Query: 224 AAVSHAKEKKK--DPLEEYCKDNMETDECRTYED 129
           AA SHA++KKK  DPLEEYCKDN ET+ECRTYED
Sbjct: 97  AAASHARDKKKGSDPLEEYCKDNPETEECRTYED 130


>ref|XP_002275043.1| PREDICTED: calvin cycle protein CP12-like [Vitis vinifera]
          Length = 128

 Score =  125 bits (313), Expect = 5e-27
 Identities = 65/92 (70%), Positives = 74/92 (80%), Gaps = 3/92 (3%)
 Frame = -3

Query: 395 RPTQFLAGRMMVGTVAATPD-LSNKVAESIKEAQEICAGGDPASGECIAAWDEVEELSAA 219
           RP++F AGRM V  VAA PD +S KV ESIK A+E C+  DPASGEC+AAWDEVEELSAA
Sbjct: 38  RPSRFGAGRMCVRPVAAAPDSISEKVVESIKNAEEKCSD-DPASGECVAAWDEVEELSAA 96

Query: 218 VSHAKEKKK--DPLEEYCKDNMETDECRTYED 129
            SHA++KKK  DPLE YCKDN E +ECRTYED
Sbjct: 97  ASHARDKKKESDPLETYCKDNPEDEECRTYED 128


>ref|XP_002320298.1| predicted protein [Populus trichocarpa] gi|222861071|gb|EEE98613.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  120 bits (301), Expect = 1e-25
 Identities = 64/92 (69%), Positives = 72/92 (78%), Gaps = 3/92 (3%)
 Frame = -3

Query: 395 RPTQFLAGRMMVGTVAATPD-LSNKVAESIKEAQEICAGGDPASGECIAAWDEVEELSAA 219
           R  Q  +GR+ V  V A P+ +S KV +SIKEA+E C+G D ASGEC AAWDEVEELSAA
Sbjct: 36  RSYQLGSGRVQVRPVRAAPEGISEKVEKSIKEAEEACSG-DAASGECAAAWDEVEELSAA 94

Query: 218 VSHAKEKKK--DPLEEYCKDNMETDECRTYED 129
            SHAK+KKK  DPLEEYCKDN ETDECRTYED
Sbjct: 95  ASHAKDKKKGSDPLEEYCKDNPETDECRTYED 126


>gb|ABK96294.1| unknown [Populus trichocarpa x Populus deltoides]
           gi|118488989|gb|ABK96302.1| unknown [Populus trichocarpa
           x Populus deltoides]
          Length = 127

 Score =  119 bits (299), Expect = 2e-25
 Identities = 63/89 (70%), Positives = 71/89 (79%), Gaps = 3/89 (3%)
 Frame = -3

Query: 386 QFLAGRMMVGTVAATPD-LSNKVAESIKEAQEICAGGDPASGECIAAWDEVEELSAAVSH 210
           Q  +GR+ V  V A P+ +S KV +SIKEA+E C+G D ASGEC AAWDEVEELSAA SH
Sbjct: 40  QLGSGRVQVRPVRAAPEGISEKVEKSIKEAEEACSG-DAASGECAAAWDEVEELSAAASH 98

Query: 209 AKEKKK--DPLEEYCKDNMETDECRTYED 129
           AK+KKK  DPLEEYCKDN ETDECRTYED
Sbjct: 99  AKDKKKGSDPLEEYCKDNPETDECRTYED 127


>gb|AFK34703.1| unknown [Medicago truncatula]
          Length = 131

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/86 (68%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
 Frame = -3

Query: 377 AGRMM-VGTVAATPDLSNKVAESIKEAQEICAGGDPASGECIAAWDEVEELSAAVSHAKE 201
           +GRM+ +  V A+PD++ KV ESIK A+E CAG D  SGEC+AAWDEVEELSAA SHA++
Sbjct: 47  SGRMVSIRPVQASPDITGKVEESIKSAEETCAG-DATSGECVAAWDEVEELSAAASHARD 105

Query: 200 KKK--DPLEEYCKDNMETDECRTYED 129
           KKK  DPLEEYCKDN ETDECRTY++
Sbjct: 106 KKKTSDPLEEYCKDNPETDECRTYDN 131


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