BLASTX nr result
ID: Panax21_contig00004627
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00004627 (673 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability ... 86 2e-32 ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|1... 84 6e-32 ref|XP_002889690.1| hypothetical protein ARALYDRAFT_470900 [Arab... 76 5e-28 dbj|BAF36320.1| hypothetical protein [Ipomoea trifida] 74 2e-26 ref|NP_172315.1| uncharacterized protein [Arabidopsis thaliana] ... 72 8e-26 >ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability protein 2 [Vitis vinifera] gi|297734866|emb|CBI17100.3| unnamed protein product [Vitis vinifera] Length = 134 Score = 85.5 bits (210), Expect(2) = 2e-32 Identities = 46/81 (56%), Positives = 58/81 (71%) Frame = -1 Query: 622 MDYSLAALKVLCVQLKAARQTNSQSAMTLGGILFQRAWLQGILVSSPTSXXXXXXXXXXX 443 MDYSLAALKV+C QL+ A++T SQ+A TLGG+LFQRAWLQG+LVS S Sbjct: 1 MDYSLAALKVMCGQLRKAKETTSQNAFTLGGVLFQRAWLQGVLVS--VSDDAQGRFVLDD 58 Query: 442 XXGMIELTLSGDFRNREFEIG 380 G+I L+LSGDF +R ++IG Sbjct: 59 GTGVIHLSLSGDFLHRNWKIG 79 Score = 80.1 bits (196), Expect(2) = 2e-32 Identities = 38/62 (61%), Positives = 48/62 (77%) Frame = -3 Query: 308 NREFEIXXXXXXXXXYFVRTDDFPMIKVHKIVDLSPYPDREAMWYLEVLEAYKLFYGPLL 129 +R ++I YFVR+ + PMIKVHKIVDLSP+PDRE+MWYLEV+EA++LFY PL Sbjct: 73 HRNWKIGMYVMVVGGYFVRSGEPPMIKVHKIVDLSPFPDRESMWYLEVIEAFRLFYQPLY 132 Query: 128 EE 123 EE Sbjct: 133 EE 134 >ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|118483555|gb|ABK93675.1| unknown [Populus trichocarpa] gi|222837597|gb|EEE75962.1| predicted protein [Populus trichocarpa] Length = 134 Score = 84.0 bits (206), Expect(2) = 6e-32 Identities = 49/81 (60%), Positives = 57/81 (70%) Frame = -1 Query: 622 MDYSLAALKVLCVQLKAARQTNSQSAMTLGGILFQRAWLQGILVSSPTSXXXXXXXXXXX 443 MDYSLAALK+LCVQLK A +T SQ+A+TLGGILFQRAWLQGILVS+ Sbjct: 1 MDYSLAALKLLCVQLKDASETPSQNALTLGGILFQRAWLQGILVSN----DGDGRLLLDD 56 Query: 442 XXGMIELTLSGDFRNREFEIG 380 G+IEL LS DFR R ++ G Sbjct: 57 GTGVIELCLSPDFRLRHWDSG 77 Score = 79.7 bits (195), Expect(2) = 6e-32 Identities = 36/46 (78%), Positives = 41/46 (89%) Frame = -3 Query: 260 FVRTDDFPMIKVHKIVDLSPYPDREAMWYLEVLEAYKLFYGPLLEE 123 FVR + PMIKVHK+VDLS +PDREAMWYLEV+EAYKLFY PL+EE Sbjct: 87 FVRHGETPMIKVHKMVDLSAFPDREAMWYLEVMEAYKLFYQPLIEE 132 >ref|XP_002889690.1| hypothetical protein ARALYDRAFT_470900 [Arabidopsis lyrata subsp. lyrata] gi|297335532|gb|EFH65949.1| hypothetical protein ARALYDRAFT_470900 [Arabidopsis lyrata subsp. lyrata] Length = 136 Score = 76.3 bits (186), Expect(2) = 5e-28 Identities = 42/81 (51%), Positives = 54/81 (66%) Frame = -1 Query: 622 MDYSLAALKVLCVQLKAARQTNSQSAMTLGGILFQRAWLQGILVSSPTSXXXXXXXXXXX 443 MDYSLAA+K+LC QL+ A+ T SQ+A LGG+LFQRAWLQG+LV P S Sbjct: 1 MDYSLAAVKMLCSQLRDAKPTPSQNATALGGVLFQRAWLQGVLV--PISGGGDNHMVLDD 58 Query: 442 XXGMIELTLSGDFRNREFEIG 380 G++EL LS DF R+++ G Sbjct: 59 GTGLVELGLSSDFALRQWKSG 79 Score = 74.3 bits (181), Expect(2) = 5e-28 Identities = 31/45 (68%), Positives = 40/45 (88%) Frame = -3 Query: 257 VRTDDFPMIKVHKIVDLSPYPDREAMWYLEVLEAYKLFYGPLLEE 123 +RT D P++KVHK+VDLS PDREAMWYLEV++AY+LFY PL++E Sbjct: 90 IRTGDIPLLKVHKMVDLSVSPDREAMWYLEVMDAYRLFYEPLIQE 134 >dbj|BAF36320.1| hypothetical protein [Ipomoea trifida] Length = 143 Score = 73.6 bits (179), Expect(2) = 2e-26 Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 3/84 (3%) Frame = -1 Query: 622 MDYSLAALKVLCVQLKAARQ--TNSQSAMTLGGILFQRAWLQGILVSSPTSXXXXXXXXX 449 MDYSL ALK+LC L A + ++SQ A +LGGILFQR WLQG+LVS P+ Sbjct: 1 MDYSLGALKILCSHLTTATEATSHSQPAFSLGGILFQRVWLQGVLVSKPSPSNDAGRFLL 60 Query: 448 XXXXGMIELTLSGDF-RNREFEIG 380 G+IEL LSGD+ +N +E+G Sbjct: 61 DDGTGVIELKLSGDYLQNDAWELG 84 Score = 72.0 bits (175), Expect(2) = 2e-26 Identities = 33/45 (73%), Positives = 38/45 (84%) Frame = -3 Query: 257 VRTDDFPMIKVHKIVDLSPYPDREAMWYLEVLEAYKLFYGPLLEE 123 VR + IKVHKIVDLSP PDREAMWYLEV+EA++LFY PL+EE Sbjct: 95 VRKNGTSFIKVHKIVDLSPVPDREAMWYLEVVEAFRLFYQPLIEE 139 >ref|NP_172315.1| uncharacterized protein [Arabidopsis thaliana] gi|20258784|gb|AAM13914.1| unknown protein [Arabidopsis thaliana] gi|332190163|gb|AEE28284.1| uncharacterized protein [Arabidopsis thaliana] Length = 137 Score = 72.4 bits (176), Expect(2) = 8e-26 Identities = 31/45 (68%), Positives = 39/45 (86%) Frame = -3 Query: 257 VRTDDFPMIKVHKIVDLSPYPDREAMWYLEVLEAYKLFYGPLLEE 123 VRT P++KVHK+VDLS PDREAMWYLEV++AY+LFY PL++E Sbjct: 91 VRTGQIPLLKVHKMVDLSVSPDREAMWYLEVMDAYRLFYEPLIQE 135 Score = 70.9 bits (172), Expect(2) = 8e-26 Identities = 39/81 (48%), Positives = 54/81 (66%) Frame = -1 Query: 622 MDYSLAALKVLCVQLKAARQTNSQSAMTLGGILFQRAWLQGILVSSPTSXXXXXXXXXXX 443 MDYSLAA+K+LC QL+ A+ T SQ+A +LGG+LFQRAWLQG+LV + Sbjct: 1 MDYSLAAVKMLCSQLRDAKPTPSQNAASLGGVLFQRAWLQGVLVPF-SGGGGDNCLVLDD 59 Query: 442 XXGMIELTLSGDFRNREFEIG 380 G++EL L+ DF R+++ G Sbjct: 60 GTGLLELGLTNDFALRQWKSG 80