BLASTX nr result

ID: Panax21_contig00004616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004616
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509832.1| protein binding protein, putative [Ricinus c...   145   3e-33
emb|CBI34360.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|XP_002280000.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   140   8e-32
ref|NP_001241561.1| uncharacterized protein LOC100816369 [Glycin...   130   1e-28
ref|XP_004143894.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   130   1e-28

>ref|XP_002509832.1| protein binding protein, putative [Ricinus communis]
           gi|223549731|gb|EEF51219.1| protein binding protein,
           putative [Ricinus communis]
          Length = 212

 Score =  145 bits (367), Expect = 3e-33
 Identities = 73/113 (64%), Positives = 84/113 (74%), Gaps = 2/113 (1%)
 Frame = +1

Query: 1   TNTGNTNESTAKILNKSEGE--VQTDIELAPSKELEDELEKSGELKKSSEFMVSGLEEED 174
           T   NT E++ K  +  E +   QT++EL  +KELE E  KS EL      +VS  EEED
Sbjct: 106 TTYTNTRETSIKCEDVKEPDCKAQTNLELDSAKELEVEFSKSVEL------LVSATEEED 159

Query: 175 VCPTCLEEYDAENPKITTKCEHHFHLSCILEWLERSDTCPVCDKEMIFNPTID 333
           VCPTCLEEYDAENPKITTKCEHHFHLSCILEW+ERSDTCPVCDKEMI +P +D
Sbjct: 160 VCPTCLEEYDAENPKITTKCEHHFHLSCILEWMERSDTCPVCDKEMIIDPPLD 212


>emb|CBI34360.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/116 (58%), Positives = 81/116 (69%), Gaps = 4/116 (3%)
 Frame = +1

Query: 1   TNTGNTNESTA----KILNKSEGEVQTDIELAPSKELEDELEKSGELKKSSEFMVSGLEE 168
           TN+G+  E+      + L K E   Q+D ++    EL    E   EL KS + +VS  +E
Sbjct: 112 TNSGSLGEAVEGNMLETLAKCEDLKQSDCKMLAQSELTSSKETEVELSKSGDPIVSSTDE 171

Query: 169 EDVCPTCLEEYDAENPKITTKCEHHFHLSCILEWLERSDTCPVCDKEMIFNPTIDA 336
           EDVCPTCLEEYDAENPKI TKCEHHFHL+CILEW+ERSDTCPVCDKEMIFN   +A
Sbjct: 172 EDVCPTCLEEYDAENPKIVTKCEHHFHLACILEWMERSDTCPVCDKEMIFNTATNA 227


>ref|XP_002280000.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Vitis
           vinifera]
          Length = 213

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/116 (58%), Positives = 81/116 (69%), Gaps = 4/116 (3%)
 Frame = +1

Query: 1   TNTGNTNESTA----KILNKSEGEVQTDIELAPSKELEDELEKSGELKKSSEFMVSGLEE 168
           TN+G+  E+      + L K E   Q+D ++    EL    E   EL KS + +VS  +E
Sbjct: 98  TNSGSLGEAVEGNMLETLAKCEDLKQSDCKMLAQSELTSSKETEVELSKSGDPIVSSTDE 157

Query: 169 EDVCPTCLEEYDAENPKITTKCEHHFHLSCILEWLERSDTCPVCDKEMIFNPTIDA 336
           EDVCPTCLEEYDAENPKI TKCEHHFHL+CILEW+ERSDTCPVCDKEMIFN   +A
Sbjct: 158 EDVCPTCLEEYDAENPKIVTKCEHHFHLACILEWMERSDTCPVCDKEMIFNTATNA 213


>ref|NP_001241561.1| uncharacterized protein LOC100816369 [Glycine max]
           gi|255641755|gb|ACU21148.1| unknown [Glycine max]
          Length = 213

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/110 (54%), Positives = 84/110 (76%), Gaps = 2/110 (1%)
 Frame = +1

Query: 10  GNTNESTAKI--LNKSEGEVQTDIELAPSKELEDELEKSGELKKSSEFMVSGLEEEDVCP 183
           G+ + ++AK+  L +S+ +VQTD+EL  +K  E EL KSG+        +  +EEED CP
Sbjct: 111 GDNHGTSAKLEELKESDCKVQTDLELDSAKGSEIELAKSGK-------PIDVVEEEDTCP 163

Query: 184 TCLEEYDAENPKITTKCEHHFHLSCILEWLERSDTCPVCDKEMIFNPTID 333
            CLEEYDAENPK+ TKC+HHFHL+CILEW+ERS+TCPVCD++++F+P I+
Sbjct: 164 ICLEEYDAENPKLATKCDHHFHLACILEWMERSETCPVCDQDLVFDPPIE 213


>ref|XP_004143894.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis
           sativus]
          Length = 211

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/109 (57%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
 Frame = +1

Query: 13  NTNESTAKI--LNKSEGEVQTDIELAPSKELEDELEKSGELKKSSEFMVSGLEEEDVCPT 186
           NT E++AK   +++S+ +  TD E+   KE E+EL K        E  V  +EEEDVCP 
Sbjct: 109 NTRETSAKCEGVDESDCKKHTDFEVDALKESENELSKG------VESAVLPIEEEDVCPI 162

Query: 187 CLEEYDAENPKITTKCEHHFHLSCILEWLERSDTCPVCDKEMIFNPTID 333
           CLEEYD ENPK+TTKCEHHFHL+CILEW+ERSD CPVCD+EM+F+  ID
Sbjct: 163 CLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFSSPID 211


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