BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004612
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   150   3e-34
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              140   3e-31
ref|XP_002524432.1| transcription initiation factor ia, putative...   135   1e-29
ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
dbj|BAF01881.1| hypothetical protein [Arabidopsis thaliana]           117   2e-24

>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Vitis vinifera]
          Length = 636

 Score =  150 bits (379), Expect = 3e-34
 Identities = 82/137 (59%), Positives = 95/137 (69%), Gaps = 5/137 (3%)
 Frame = -1

Query: 716 LFYGMLESELSRAFGGLERLDMFFPFDPYLLQNSDRFIHPNFVYWSMVRTTYXXXXXXXX 537
           +F  +LESELSRAFGG+ERLDMFFPFDP LL+  DRFI PNFVYWSM+RTTY        
Sbjct: 502 IFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTYDDGEDSSD 561

Query: 536 XXXXXXXXXXINGVNTRDDGIAMSFD--DLALNEFDNSLNKMSITPKN---YRFGSELQG 372
                            DD +A S+D  DL L+EFD+S+NKMSITPKN   YRFG EL  
Sbjct: 562 EEPAEDYEASHPDDVMNDDAMARSYDSHDLELDEFDHSMNKMSITPKNSLYYRFGDEL-- 619

Query: 371 RMRMPSRIRPSTSPESL 321
           +++MPSRIRPSTSPESL
Sbjct: 620 KVQMPSRIRPSTSPESL 636


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  140 bits (353), Expect = 3e-31
 Identities = 76/135 (56%), Positives = 94/135 (69%), Gaps = 3/135 (2%)
 Frame = -1

Query: 716 LFYGMLESELSRAFGGLERLDMFFPFDPYLLQNSDRFIHPNFVYWSMVRTTYXXXXXXXX 537
           +F  +LESELSRAFGG+ERLDMFFPFDP LL+  DRFI PNFVYWSM+RTTY        
Sbjct: 493 IFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTY-------- 544

Query: 536 XXXXXXXXXXINGVNTRDDGIAMSFDDLALNEFDNSLNKMSITPKN---YRFGSELQGRM 366
                      +G ++ D+  A  ++    ++FD+S+NKMSITPKN   YRFG EL  ++
Sbjct: 545 ----------DDGEDSSDEEPAEDYEASHPDDFDHSMNKMSITPKNSLYYRFGDEL--KV 592

Query: 365 RMPSRIRPSTSPESL 321
           +MPSRIRPSTSPESL
Sbjct: 593 QMPSRIRPSTSPESL 607


>ref|XP_002524432.1| transcription initiation factor ia, putative [Ricinus communis]
           gi|223536316|gb|EEF37967.1| transcription initiation
           factor ia, putative [Ricinus communis]
          Length = 640

 Score =  135 bits (339), Expect = 1e-29
 Identities = 78/136 (57%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
 Frame = -1

Query: 719 SLFYGMLESELSRAFGGLERLDMFFPFDPYLLQNSDR-FIHPNFVYWSMVRTTYXXXXXX 543
           S F  +LESE S+ FGGLERLDMFFPFDP LL+  DR FI PNFVYW  VRTTY      
Sbjct: 506 SSFEDVLESEFSKDFGGLERLDMFFPFDPCLLRTCDRSFIRPNFVYWKDVRTTYGSDEED 565

Query: 542 XXXXXXXXXXXXINGVNTRDDGIAMSFD--DLALNEFDNSLNKMSITPKNYRFGSELQGR 369
                       ING +  ++G+A S D   L L+EFD ++NKMSITPKN RFG     R
Sbjct: 566 SSDEDIAEDFTDINGGSYMEEGMATSLDGQHLDLDEFDYAMNKMSITPKN-RFGIRFGER 624

Query: 368 MRMPSRIRPSTSPESL 321
           M+MPS+IRPSTSPESL
Sbjct: 625 MQMPSKIRPSTSPESL 640


>ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|222856647|gb|EEE94194.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  134 bits (336), Expect = 2e-29
 Identities = 76/139 (54%), Positives = 92/139 (66%), Gaps = 5/139 (3%)
 Frame = -1

Query: 722 ASLFYGMLESELSRAFGGLERLDMFFPFDPYLLQNSDR-FIHPNFVYWSMVRTTYXXXXX 546
           A +F  +LES+LSR FGGLERLDMFFPFDP LL+  DR FI PNF+YW+ V+TTY     
Sbjct: 502 AFIFEDLLESDLSRDFGGLERLDMFFPFDPCLLKKCDRGFIRPNFIYWNHVKTTYDDDEE 561

Query: 545 XXXXXXXXXXXXXINGVNTRDDGIAMSFD-DLALNEFDNSLNKMSITPKN---YRFGSEL 378
                        +N  N  ++G+A SFD D+ L+EFD  +NKMSITPKN   + FG E 
Sbjct: 562 DSSDEDIADDFGVLNEENFMEEGMARSFDQDIDLDEFDYVMNKMSITPKNTSGFHFGGE- 620

Query: 377 QGRMRMPSRIRPSTSPESL 321
               RMPS+IRPSTSPESL
Sbjct: 621 ----RMPSKIRPSTSPESL 635


>dbj|BAF01881.1| hypothetical protein [Arabidopsis thaliana]
          Length = 410

 Score =  117 bits (293), Expect = 2e-24
 Identities = 70/136 (51%), Positives = 86/136 (63%), Gaps = 1/136 (0%)
 Frame = -1

Query: 725 DASLFYGMLESELSRAFGGLERLDMFFPFDPYLLQNSDRFIHPNFVYWSMVRTTYXXXXX 546
           D+ +F  +LESELSRAFGG ERLD FFPFDP LL++S+ FI PNF+YWSMV+ TY     
Sbjct: 289 DSFIFDDLLESELSRAFGGFERLDTFFPFDPCLLKSSNSFISPNFIYWSMVKATY----- 343

Query: 545 XXXXXXXXXXXXXINGVNTRDDGIAMSFDDLALNEFDNSLNKMSITPK-NYRFGSELQGR 369
                        +NG    D+      DD A  + D +LNKMSITPK +++   E    
Sbjct: 344 -DEDDDDNDAEVIVNGDEDSDE------DDEA--DLDYALNKMSITPKHSFKNKMERDRL 394

Query: 368 MRMPSRIRPSTSPESL 321
           +RMPSRIRPSTSPESL
Sbjct: 395 LRMPSRIRPSTSPESL 410