BLASTX nr result

ID: Panax21_contig00004596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004596
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q285L8.1|RS3A_TOBAC RecName: Full=40S ribosomal protein S3a; ...   357   9e-97
sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; ...   355   2e-96
gb|ABB55367.1| cyc07-like [Solanum tuberosum] gi|82400110|gb|ABB...   352   2e-95
gb|ABB87133.1| 40S ribosomal protein S3a-like [Solanum tuberosum]     350   7e-95
gb|ABB72808.1| cyc07-like protein [Solanum tuberosum]                 350   7e-95

>sp|Q285L8.1|RS3A_TOBAC RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
           cyc07 gi|76262913|gb|ABA41527.1| cyc07 [Nicotiana
           tabacum]
          Length = 261

 Score =  357 bits (915), Expect = 9e-97
 Identities = 178/185 (96%), Positives = 183/185 (98%)
 Frame = -2

Query: 562 VFEVSLADLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAH 383
           VFEVSLADLQKDEDQ++RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLV+KWQTLIEAH
Sbjct: 65  VFEVSLADLQKDEDQSFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVKKWQTLIEAH 124

Query: 382 VDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL 203
           VDVKTTDSYTLRMFCI FTKKR NQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL
Sbjct: 125 VDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL 184

Query: 202 VAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLE 23
           VAKFIPESIGREIEKATSSIFPLQNV+IRKVKILKAPKFDIGKLMEVHGDYSEDVGVKL+
Sbjct: 185 VAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLD 244

Query: 22  RPADE 8
           RPADE
Sbjct: 245 RPADE 249


>sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
           cyc07 gi|6714564|dbj|BAA89498.1| cyc07 [Daucus carota]
          Length = 261

 Score =  355 bits (912), Expect = 2e-96
 Identities = 180/185 (97%), Positives = 182/185 (98%)
 Frame = -2

Query: 562 VFEVSLADLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAH 383
           VFEV LADLQ DEDQAYRKIRLRAEDVQGKNVLTNF+GMDFTTDKLRSLVRKWQTLIEAH
Sbjct: 65  VFEVCLADLQGDEDQAYRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTLIEAH 124

Query: 382 VDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL 203
           VDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL
Sbjct: 125 VDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL 184

Query: 202 VAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLE 23
           VAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLE
Sbjct: 185 VAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLE 244

Query: 22  RPADE 8
           RP +E
Sbjct: 245 RPIEE 249


>gb|ABB55367.1| cyc07-like [Solanum tuberosum] gi|82400110|gb|ABB72794.1|
           cyc07-like protein [Solanum tuberosum]
          Length = 261

 Score =  352 bits (903), Expect = 2e-95
 Identities = 177/185 (95%), Positives = 182/185 (98%)
 Frame = -2

Query: 562 VFEVSLADLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAH 383
           VFEVSLADLQKDEDQAYRKIRLRAEDVQG+NVLTNF GMDFTTDKLRSLVRKWQTLIEAH
Sbjct: 65  VFEVSLADLQKDEDQAYRKIRLRAEDVQGRNVLTNFHGMDFTTDKLRSLVRKWQTLIEAH 124

Query: 382 VDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL 203
           VDVKTTDSYTLRMFCI FTKKR NQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL
Sbjct: 125 VDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL 184

Query: 202 VAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLE 23
           VAKFIPESIGREIEKATSSIFPLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVKL+
Sbjct: 185 VAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLD 244

Query: 22  RPADE 8
           RPA+E
Sbjct: 245 RPAEE 249


>gb|ABB87133.1| 40S ribosomal protein S3a-like [Solanum tuberosum]
          Length = 261

 Score =  350 bits (899), Expect = 7e-95
 Identities = 176/185 (95%), Positives = 182/185 (98%)
 Frame = -2

Query: 562 VFEVSLADLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAH 383
           VFEVSLADLQKDEDQA+RKIRLRAEDVQG+NVLTNF GMDFTTDKLRSLVRKWQTLIEAH
Sbjct: 65  VFEVSLADLQKDEDQAFRKIRLRAEDVQGRNVLTNFHGMDFTTDKLRSLVRKWQTLIEAH 124

Query: 382 VDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL 203
           VDVKTTDSYTLRMFCI FTKKR NQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL
Sbjct: 125 VDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL 184

Query: 202 VAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLE 23
           VAKFIPESIGREIEKATSSIFPLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVKL+
Sbjct: 185 VAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLD 244

Query: 22  RPADE 8
           RPA+E
Sbjct: 245 RPAEE 249


>gb|ABB72808.1| cyc07-like protein [Solanum tuberosum]
          Length = 260

 Score =  350 bits (899), Expect = 7e-95
 Identities = 176/185 (95%), Positives = 182/185 (98%)
 Frame = -2

Query: 562 VFEVSLADLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAH 383
           VFEVSLADLQKDEDQA+RKIRLRAEDVQG+NVLTNF GMDFTTDKLRSLVRKWQTLIEAH
Sbjct: 64  VFEVSLADLQKDEDQAFRKIRLRAEDVQGRNVLTNFHGMDFTTDKLRSLVRKWQTLIEAH 123

Query: 382 VDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL 203
           VDVKTTDSYTLRMFCI FTKKR NQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL
Sbjct: 124 VDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKEL 183

Query: 202 VAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLE 23
           VAKFIPESIGREIEKATSSIFPLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVKL+
Sbjct: 184 VAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLD 243

Query: 22  RPADE 8
           RPA+E
Sbjct: 244 RPAEE 248


Top