BLASTX nr result

ID: Panax21_contig00004595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004595
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q285L8.1|RS3A_TOBAC RecName: Full=40S ribosomal protein S3a; ...   287   3e-75
sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; ...   287   3e-75
gb|ABB55367.1| cyc07-like [Solanum tuberosum] gi|82400110|gb|ABB...   285   2e-74
gb|ABB87133.1| 40S ribosomal protein S3a-like [Solanum tuberosum]     283   5e-74
gb|ABB72808.1| cyc07-like protein [Solanum tuberosum]                 282   1e-73

>sp|Q285L8.1|RS3A_TOBAC RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein cyc07
            gi|76262913|gb|ABA41527.1| cyc07 [Nicotiana tabacum]
          Length = 261

 Score =  287 bits (734), Expect = 3e-75
 Identities = 146/153 (95%), Positives = 149/153 (97%)
 Frame = +2

Query: 548  TQGIKLIASEGLKHRVFEVSLADLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDK 727
            TQG K IASEGLKHRVFEVSLADLQKDEDQ++RKIRLRAEDVQGKNVLTNFWGMDFTTDK
Sbjct: 51   TQGTK-IASEGLKHRVFEVSLADLQKDEDQSFRKIRLRAEDVQGKNVLTNFWGMDFTTDK 109

Query: 728  LRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMV 907
            LRSLV+KWQTLIEAHVDVKTTDSYTLRMFCI FTKKR NQQKRTCYAQSSQIRQIRRKMV
Sbjct: 110  LRSLVKKWQTLIEAHVDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMV 169

Query: 908  EIMRNQASSCDLKELVAKFIPESIGREIEKATS 1006
            EIMRNQASSCDLKELVAKFIPESIGREIEKATS
Sbjct: 170  EIMRNQASSCDLKELVAKFIPESIGREIEKATS 202


>sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein cyc07
            gi|6714564|dbj|BAA89498.1| cyc07 [Daucus carota]
          Length = 261

 Score =  287 bits (734), Expect = 3e-75
 Identities = 148/153 (96%), Positives = 149/153 (97%)
 Frame = +2

Query: 548  TQGIKLIASEGLKHRVFEVSLADLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDK 727
            TQG K IASEGLKHRVFEV LADLQ DEDQAYRKIRLRAEDVQGKNVLTNF+GMDFTTDK
Sbjct: 51   TQGTK-IASEGLKHRVFEVCLADLQGDEDQAYRKIRLRAEDVQGKNVLTNFYGMDFTTDK 109

Query: 728  LRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMV 907
            LRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMV
Sbjct: 110  LRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMV 169

Query: 908  EIMRNQASSCDLKELVAKFIPESIGREIEKATS 1006
            EIMRNQASSCDLKELVAKFIPESIGREIEKATS
Sbjct: 170  EIMRNQASSCDLKELVAKFIPESIGREIEKATS 202


>gb|ABB55367.1| cyc07-like [Solanum tuberosum] gi|82400110|gb|ABB72794.1| cyc07-like
            protein [Solanum tuberosum]
          Length = 261

 Score =  285 bits (728), Expect = 2e-74
 Identities = 147/153 (96%), Positives = 148/153 (96%)
 Frame = +2

Query: 548  TQGIKLIASEGLKHRVFEVSLADLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDK 727
            TQG K IASEGLKHRVFEVSLADLQKDEDQAYRKIRLRAEDVQG+NVLTNF GMDFTTDK
Sbjct: 51   TQGTK-IASEGLKHRVFEVSLADLQKDEDQAYRKIRLRAEDVQGRNVLTNFHGMDFTTDK 109

Query: 728  LRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMV 907
            LRSLVRKWQTLIEAHVDVKTTDSYTLRMFCI FTKKR NQQKRTCYAQSSQIRQIRRKMV
Sbjct: 110  LRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMV 169

Query: 908  EIMRNQASSCDLKELVAKFIPESIGREIEKATS 1006
            EIMRNQASSCDLKELVAKFIPESIGREIEKATS
Sbjct: 170  EIMRNQASSCDLKELVAKFIPESIGREIEKATS 202


>gb|ABB87133.1| 40S ribosomal protein S3a-like [Solanum tuberosum]
          Length = 261

 Score =  283 bits (724), Expect = 5e-74
 Identities = 146/153 (95%), Positives = 148/153 (96%)
 Frame = +2

Query: 548  TQGIKLIASEGLKHRVFEVSLADLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDK 727
            TQG K IASEGLKHRVFEVSLADLQKDEDQA+RKIRLRAEDVQG+NVLTNF GMDFTTDK
Sbjct: 51   TQGTK-IASEGLKHRVFEVSLADLQKDEDQAFRKIRLRAEDVQGRNVLTNFHGMDFTTDK 109

Query: 728  LRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMV 907
            LRSLVRKWQTLIEAHVDVKTTDSYTLRMFCI FTKKR NQQKRTCYAQSSQIRQIRRKMV
Sbjct: 110  LRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMV 169

Query: 908  EIMRNQASSCDLKELVAKFIPESIGREIEKATS 1006
            EIMRNQASSCDLKELVAKFIPESIGREIEKATS
Sbjct: 170  EIMRNQASSCDLKELVAKFIPESIGREIEKATS 202


>gb|ABB72808.1| cyc07-like protein [Solanum tuberosum]
          Length = 260

 Score =  282 bits (721), Expect = 1e-73
 Identities = 145/153 (94%), Positives = 148/153 (96%)
 Frame = +2

Query: 548  TQGIKLIASEGLKHRVFEVSLADLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDK 727
            TQG K IAS+GLKHRVFEVSLADLQKDEDQA+RKIRLRAEDVQG+NVLTNF GMDFTTDK
Sbjct: 50   TQGTK-IASDGLKHRVFEVSLADLQKDEDQAFRKIRLRAEDVQGRNVLTNFHGMDFTTDK 108

Query: 728  LRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMV 907
            LRSLVRKWQTLIEAHVDVKTTDSYTLRMFCI FTKKR NQQKRTCYAQSSQIRQIRRKMV
Sbjct: 109  LRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMV 168

Query: 908  EIMRNQASSCDLKELVAKFIPESIGREIEKATS 1006
            EIMRNQASSCDLKELVAKFIPESIGREIEKATS
Sbjct: 169  EIMRNQASSCDLKELVAKFIPESIGREIEKATS 201


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