BLASTX nr result

ID: Panax21_contig00004592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004592
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFY26900.1| dynein light chain [Morella rubra]                     182   4e-44
ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic...   179   2e-43
ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|1...   176   2e-42
ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagell...   174   1e-41
ref|XP_003546364.1| PREDICTED: dynein light chain 2, cytoplasmic...   172   4e-41

>gb|AFY26900.1| dynein light chain [Morella rubra]
          Length = 125

 Score =  182 bits (461), Expect = 4e-44
 Identities = 91/125 (72%), Positives = 102/125 (81%), Gaps = 8/125 (6%)
 Frame = +3

Query: 96  MSEEAKRIGAGALVVK----DDRKPSSAVSP----PSAGKKVIIKSADMKDDMQMEAVDI 251
           MSE+AKR   G L+VK    DDRKPS+A  P    P +GK+VIIKSADM  DMQ EA+D 
Sbjct: 1   MSEDAKRAIQGGLMVKPPSSDDRKPSAAAGPRPATPPSGKRVIIKSADMLPDMQKEAIDT 60

Query: 252 AVGAFEKHGVEKDVAEHIKKEFDKKYGPTWHCIVGKNFGSYVTHETNHFVYFYLDTKAVL 431
           A+ AFEKH VEKDVAEHIKKEFD+++G TWHCIVG+NFGSYVTHETNHFVYFYLD KAVL
Sbjct: 61  AIAAFEKHSVEKDVAEHIKKEFDQRHGSTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVL 120

Query: 432 LFKSG 446
           LFKSG
Sbjct: 121 LFKSG 125


>ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max]
          Length = 157

 Score =  179 bits (455), Expect = 2e-43
 Identities = 94/124 (75%), Positives = 102/124 (82%), Gaps = 5/124 (4%)
 Frame = +3

Query: 90  RKMSEEAKRIGAGALVVK---DDRKPSSAVSPPSA--GKKVIIKSADMKDDMQMEAVDIA 254
           RKMSE+AK+  AGAL  +   DD+KPS   SP  A   KKVIIKSADM  DMQ EAVDIA
Sbjct: 34  RKMSEDAKKNIAGALTARPNSDDQKPSPLPSPAPAVPPKKVIIKSADMIPDMQKEAVDIA 93

Query: 255 VGAFEKHGVEKDVAEHIKKEFDKKYGPTWHCIVGKNFGSYVTHETNHFVYFYLDTKAVLL 434
           V AFEK+ VEKDVAE IKKEFDK++GPTWHCIVG+NFGSYVTHETNHFVYFYLD KAVLL
Sbjct: 94  VAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLL 153

Query: 435 FKSG 446
           FKSG
Sbjct: 154 FKSG 157


>ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|118482080|gb|ABK92971.1|
           unknown [Populus trichocarpa]
           gi|222838609|gb|EEE76974.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/119 (73%), Positives = 100/119 (84%), Gaps = 3/119 (2%)
 Frame = +3

Query: 99  SEEAKRIGAGALVVKDD---RKPSSAVSPPSAGKKVIIKSADMKDDMQMEAVDIAVGAFE 269
           SE+ KR   G + V++D   RK S A + P  GKK+IIK+ADMKDDMQ EAVDIA+ AFE
Sbjct: 3   SEDMKRSITGGVKVENDSYYRKSSPAAAAPP-GKKIIIKNADMKDDMQKEAVDIAIAAFE 61

Query: 270 KHGVEKDVAEHIKKEFDKKYGPTWHCIVGKNFGSYVTHETNHFVYFYLDTKAVLLFKSG 446
           ++ VEKDVAEHIKKEFDKK+GPTWHCIVG+NFGSYVTHETNHFVYFYLD KAVLLFKSG
Sbjct: 62  RNNVEKDVAEHIKKEFDKKHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 120


>ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagellar outer arm [Vitis
           vinifera] gi|147857576|emb|CAN81003.1| hypothetical
           protein VITISV_006994 [Vitis vinifera]
          Length = 117

 Score =  174 bits (440), Expect = 1e-41
 Identities = 89/120 (74%), Positives = 100/120 (83%), Gaps = 3/120 (2%)
 Frame = +3

Query: 96  MSEEAKRIGAGALVVK---DDRKPSSAVSPPSAGKKVIIKSADMKDDMQMEAVDIAVGAF 266
           M+E+ KR GA AL +K   DDRK S A S   A K+VIIKSADMKDDMQ EA+DIA+ A 
Sbjct: 1   MAEDLKRNGALALSLKQSSDDRKLSLAAS---ASKRVIIKSADMKDDMQKEAIDIAIAAS 57

Query: 267 EKHGVEKDVAEHIKKEFDKKYGPTWHCIVGKNFGSYVTHETNHFVYFYLDTKAVLLFKSG 446
           E H VEK++AE+IKKEFDKK+GPTWHCIVG+NFGSYVTHETNHFVYFYLD KAVLLFKSG
Sbjct: 58  ENHSVEKNIAEYIKKEFDKKHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117


>ref|XP_003546364.1| PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max]
          Length = 122

 Score =  172 bits (435), Expect = 4e-41
 Identities = 91/122 (74%), Positives = 99/122 (81%), Gaps = 5/122 (4%)
 Frame = +3

Query: 96  MSEEAKRIGAGALVVK---DDRKPSSAVSPPSA--GKKVIIKSADMKDDMQMEAVDIAVG 260
           MSE+AK+  AGAL  +   DD+K S   SP  A   KKVIIKSADM  DMQ EAVDIAV 
Sbjct: 1   MSEDAKKNIAGALTARPNSDDQKLSPLPSPAPAVPPKKVIIKSADMIPDMQKEAVDIAVA 60

Query: 261 AFEKHGVEKDVAEHIKKEFDKKYGPTWHCIVGKNFGSYVTHETNHFVYFYLDTKAVLLFK 440
           AFEK+ VEKDVAE IKKEFDK++GPTWHCIVG+NFGSYVTHETNHFVYFYLD KAVLLFK
Sbjct: 61  AFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFK 120

Query: 441 SG 446
           SG
Sbjct: 121 SG 122


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