BLASTX nr result

ID: Panax21_contig00004580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004580
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]      119   2e-25
ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Sela...   119   2e-25
emb|CBI17535.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei...   119   3e-25
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p...   118   7e-25

>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
          Length = 532

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/79 (72%), Positives = 62/79 (78%)
 Frame = -2

Query: 551 LVSDKEANKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRXXX 372
           LV+DK  NKPRGYAFIEY+HTRDMKAAYKQADG+K+DNRRVLVDVERGRTVPNWRPR   
Sbjct: 186 LVTDKSTNKPRGYAFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRRLG 245

Query: 371 XXXXXXXXXXXXVNQRYSG 315
                       +NQRYSG
Sbjct: 246 GGLGTTRVGGEELNQRYSG 264


>ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii]
           gi|300151088|gb|EFJ17735.1| hypothetical protein
           SELMODRAFT_154282 [Selaginella moellendorffii]
          Length = 246

 Score =  119 bits (299), Expect = 2e-25
 Identities = 58/79 (73%), Positives = 62/79 (78%)
 Frame = -2

Query: 551 LVSDKEANKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRXXX 372
           LV DK++NKPRGYAFIEY HTRDMKAAYKQADGRK+DNRRVLVDVERGRTVPNWRPR   
Sbjct: 39  LVHDKDSNKPRGYAFIEYFHTRDMKAAYKQADGRKIDNRRVLVDVERGRTVPNWRPRRLG 98

Query: 371 XXXXXXXXXXXXVNQRYSG 315
                       VNQ+YSG
Sbjct: 99  GGLGSTRVGGDEVNQKYSG 117


>emb|CBI17535.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/79 (73%), Positives = 62/79 (78%)
 Frame = -2

Query: 551 LVSDKEANKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRXXX 372
           L++DKE +KPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPR   
Sbjct: 169 LITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRRLG 228

Query: 371 XXXXXXXXXXXXVNQRYSG 315
                       VN +YSG
Sbjct: 229 GGLGTTRVGGEEVNPKYSG 247


>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
           vinifera]
          Length = 514

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/79 (73%), Positives = 62/79 (78%)
 Frame = -2

Query: 551 LVSDKEANKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRXXX 372
           L++DKE +KPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPR   
Sbjct: 169 LITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRRLG 228

Query: 371 XXXXXXXXXXXXVNQRYSG 315
                       VN +YSG
Sbjct: 229 GGLGTTRVGGEEVNPKYSG 247


>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
           communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
           ribonucleoprotein 70 kDa, putative [Ricinus communis]
          Length = 506

 Score =  118 bits (295), Expect = 7e-25
 Identities = 59/79 (74%), Positives = 61/79 (77%)
 Frame = -2

Query: 551 LVSDKEANKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRXXX 372
           L++DK ANKPRGYAFIEYMHTRDMKAAYKQADGRKLD RRVLVDVERGRTVPNWRPR   
Sbjct: 169 LITDKAANKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228

Query: 371 XXXXXXXXXXXXVNQRYSG 315
                       VNQR SG
Sbjct: 229 GGLGTTRVGGEEVNQRNSG 247


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