BLASTX nr result

ID: Panax21_contig00004579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004579
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331805.1| predicted protein [Populus trichocarpa] gi|2...   422   e-116
emb|CBI20191.3| unnamed protein product [Vitis vinifera]              413   e-113
ref|XP_002285451.1| PREDICTED: uroporphyrinogen decarboxylase 1,...   413   e-113
ref|XP_002525035.1| uroporphyrinogen decarboxylase, putative [Ri...   411   e-112
ref|XP_004156545.1| PREDICTED: uroporphyrinogen decarboxylase 1,...   407   e-111

>ref|XP_002331805.1| predicted protein [Populus trichocarpa] gi|222874501|gb|EEF11632.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  422 bits (1086), Expect = e-116
 Identities = 201/236 (85%), Positives = 219/236 (92%)
 Frame = +1

Query: 1   LRILRQQVGNQAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHKAPHILRALLSHIAK 180
           LRILR +V  +AAVLGFVGAPWTIATYIVEGGTTRTYT IKSMCH AP +LRALLSH+ K
Sbjct: 123 LRILRNEVEGRAAVLGFVGAPWTIATYIVEGGTTRTYTNIKSMCHTAPQVLRALLSHLTK 182

Query: 181 AISDYVVFQVESGAHCVQIFDSWGGQLPPDMWDRWSKPYIDQIVSVVRKKCPETPLVLYI 360
           AISDY+VFQVESGAHC+QIFDSWGGQLPPDMWDRWSKPYI++IVS VR KCPETPLVLYI
Sbjct: 183 AISDYIVFQVESGAHCIQIFDSWGGQLPPDMWDRWSKPYIEEIVSTVRNKCPETPLVLYI 242

Query: 361 NGNGGFLERMRGTGVDVIGLDWTVDMADGRKRLGSDISIQGNVDPAYLFSTLPALTEEIQ 540
           NGNGG LERM+GTGVDVIGLDWTVD+ADGRKRLGS IS+QGNVDPAYLFS LPALT+EIQ
Sbjct: 243 NGNGGLLERMKGTGVDVIGLDWTVDLADGRKRLGSGISVQGNVDPAYLFSPLPALTDEIQ 302

Query: 541 RVVKCAGPRGHILNLGHGVLVGTPEEAVAHFFDVARSLKYDTPVEGHAKKEAKLVV 708
           RVV+CAGPRGHILNLGHGVLVGTPEEAVAHFF+VARSL++ TP +GH  +E KLVV
Sbjct: 303 RVVRCAGPRGHILNLGHGVLVGTPEEAVAHFFEVARSLEFTTP-QGHVVEEPKLVV 357


>emb|CBI20191.3| unnamed protein product [Vitis vinifera]
          Length = 1560

 Score =  413 bits (1062), Expect = e-113
 Identities = 196/236 (83%), Positives = 218/236 (92%)
 Frame = +1

Query: 1    LRILRQQVGNQAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHKAPHILRALLSHIAK 180
            LRILRQ+VG QAAVLGFVGAPWTI TYIVEGGTTRTYT IKSMCH AP++LRALLSH+ +
Sbjct: 1325 LRILRQEVGGQAAVLGFVGAPWTIGTYIVEGGTTRTYTIIKSMCHTAPNVLRALLSHLTQ 1384

Query: 181  AISDYVVFQVESGAHCVQIFDSWGGQLPPDMWDRWSKPYIDQIVSVVRKKCPETPLVLYI 360
            AIS+Y+VFQVESGAHC+QIFDSWGGQLPPDMW+ WSKPYI+++VSVVRK+CP TP+VLYI
Sbjct: 1385 AISEYIVFQVESGAHCIQIFDSWGGQLPPDMWECWSKPYIEEMVSVVRKRCPGTPIVLYI 1444

Query: 361  NGNGGFLERMRGTGVDVIGLDWTVDMADGRKRLGSDISIQGNVDPAYLFSTLPALTEEIQ 540
            NGNGG LERM+GTGVDVIGLDWTVDMADGRKRLGS ISIQGNVDPAYLFS LPALT+EIQ
Sbjct: 1445 NGNGGLLERMKGTGVDVIGLDWTVDMADGRKRLGSGISIQGNVDPAYLFSPLPALTDEIQ 1504

Query: 541  RVVKCAGPRGHILNLGHGVLVGTPEEAVAHFFDVARSLKYDTPVEGHAKKEAKLVV 708
            RVV+CAGPRGHILNLGHGVLVGTPEEAVAHFF+VAR+L   T +E +A +E KL V
Sbjct: 1505 RVVRCAGPRGHILNLGHGVLVGTPEEAVAHFFEVARNLNLSTLLEDNAVEEPKLAV 1560


>ref|XP_002285451.1| PREDICTED: uroporphyrinogen decarboxylase 1, chloroplastic-like
           [Vitis vinifera]
          Length = 409

 Score =  413 bits (1062), Expect = e-113
 Identities = 196/236 (83%), Positives = 218/236 (92%)
 Frame = +1

Query: 1   LRILRQQVGNQAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHKAPHILRALLSHIAK 180
           LRILRQ+VG QAAVLGFVGAPWTI TYIVEGGTTRTYT IKSMCH AP++LRALLSH+ +
Sbjct: 174 LRILRQEVGGQAAVLGFVGAPWTIGTYIVEGGTTRTYTIIKSMCHTAPNVLRALLSHLTQ 233

Query: 181 AISDYVVFQVESGAHCVQIFDSWGGQLPPDMWDRWSKPYIDQIVSVVRKKCPETPLVLYI 360
           AIS+Y+VFQVESGAHC+QIFDSWGGQLPPDMW+ WSKPYI+++VSVVRK+CP TP+VLYI
Sbjct: 234 AISEYIVFQVESGAHCIQIFDSWGGQLPPDMWECWSKPYIEEMVSVVRKRCPGTPIVLYI 293

Query: 361 NGNGGFLERMRGTGVDVIGLDWTVDMADGRKRLGSDISIQGNVDPAYLFSTLPALTEEIQ 540
           NGNGG LERM+GTGVDVIGLDWTVDMADGRKRLGS ISIQGNVDPAYLFS LPALT+EIQ
Sbjct: 294 NGNGGLLERMKGTGVDVIGLDWTVDMADGRKRLGSGISIQGNVDPAYLFSPLPALTDEIQ 353

Query: 541 RVVKCAGPRGHILNLGHGVLVGTPEEAVAHFFDVARSLKYDTPVEGHAKKEAKLVV 708
           RVV+CAGPRGHILNLGHGVLVGTPEEAVAHFF+VAR+L   T +E +A +E KL V
Sbjct: 354 RVVRCAGPRGHILNLGHGVLVGTPEEAVAHFFEVARNLNLSTLLEDNAVEEPKLAV 409


>ref|XP_002525035.1| uroporphyrinogen decarboxylase, putative [Ricinus communis]
           gi|223535697|gb|EEF37362.1| uroporphyrinogen
           decarboxylase, putative [Ricinus communis]
          Length = 429

 Score =  411 bits (1057), Expect = e-112
 Identities = 193/236 (81%), Positives = 217/236 (91%)
 Frame = +1

Query: 1   LRILRQQVGNQAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHKAPHILRALLSHIAK 180
           LRILR++V  +AAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCH APH+LRALLSH+ +
Sbjct: 194 LRILRREVDGRAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRALLSHLTQ 253

Query: 181 AISDYVVFQVESGAHCVQIFDSWGGQLPPDMWDRWSKPYIDQIVSVVRKKCPETPLVLYI 360
           AIS+Y+VFQVESGA C+QIFDSWGGQLPP+MWD WSKPYI+++V  VR KCPE PLVLYI
Sbjct: 254 AISEYIVFQVESGAQCIQIFDSWGGQLPPEMWDCWSKPYIEEVVRKVRSKCPEIPLVLYI 313

Query: 361 NGNGGFLERMRGTGVDVIGLDWTVDMADGRKRLGSDISIQGNVDPAYLFSTLPALTEEIQ 540
           NGNGG LERM+GTGVDVIGLDWTVDMADGRKRLGS IS+QGNVDPAYLFS L ALT+EIQ
Sbjct: 314 NGNGGLLERMKGTGVDVIGLDWTVDMADGRKRLGSGISVQGNVDPAYLFSPLSALTDEIQ 373

Query: 541 RVVKCAGPRGHILNLGHGVLVGTPEEAVAHFFDVARSLKYDTPVEGHAKKEAKLVV 708
           RVV+CAGP+GHILNLGHGVLVGTPEEAVAHFF+VARSLKY+TP++    +E +LVV
Sbjct: 374 RVVRCAGPKGHILNLGHGVLVGTPEEAVAHFFEVARSLKYNTPLQNQVAEEPELVV 429


>ref|XP_004156545.1| PREDICTED: uroporphyrinogen decarboxylase 1, chloroplastic-like
           [Cucumis sativus]
          Length = 466

 Score =  407 bits (1045), Expect = e-111
 Identities = 189/235 (80%), Positives = 213/235 (90%)
 Frame = +1

Query: 1   LRILRQQVGNQAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHKAPHILRALLSHIAK 180
           L++LR++V   AAVLGFVGAPWTIATYIVEGGTTRTYTTIK MCH APH+L+ LLSH+ +
Sbjct: 231 LKLLRKEVEGSAAVLGFVGAPWTIATYIVEGGTTRTYTTIKRMCHTAPHVLKTLLSHLTQ 290

Query: 181 AISDYVVFQVESGAHCVQIFDSWGGQLPPDMWDRWSKPYIDQIVSVVRKKCPETPLVLYI 360
           AIS+Y+++Q+E GAHC+QIFDSWGGQLPPDMW+ WSKPYI +IVS VR KCPETPLVLYI
Sbjct: 291 AISEYIIYQIEHGAHCIQIFDSWGGQLPPDMWESWSKPYIQKIVSTVRDKCPETPLVLYI 350

Query: 361 NGNGGFLERMRGTGVDVIGLDWTVDMADGRKRLGSDISIQGNVDPAYLFSTLPALTEEIQ 540
           NGNGG LERM+GTGVDVIGLDWTVDMADGR RLG+DIS+QGNVDPAYLFSTLPALTEEIQ
Sbjct: 351 NGNGGLLERMKGTGVDVIGLDWTVDMADGRNRLGTDISVQGNVDPAYLFSTLPALTEEIQ 410

Query: 541 RVVKCAGPRGHILNLGHGVLVGTPEEAVAHFFDVARSLKYDTPVEGHAKKEAKLV 705
           RVV+CAGPRGHILNLGHGVLVGTPEEAVAHFFDVARSL ++T  +    +E KLV
Sbjct: 411 RVVRCAGPRGHILNLGHGVLVGTPEEAVAHFFDVARSLNFNTLSQDLTAQEPKLV 465


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