BLASTX nr result
ID: Panax21_contig00004570
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00004570
(1267 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g... 572 e-161
emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera] 572 e-161
ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g... 540 e-151
ref|XP_002305041.1| predicted protein [Populus trichocarpa] gi|2... 520 e-145
ref|XP_002317286.1| predicted protein [Populus trichocarpa] gi|2... 493 e-137
>ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 572 bits (1475), Expect = e-161
Identities = 290/398 (72%), Positives = 332/398 (83%)
Frame = +1
Query: 16 MGETGKRSRNRSQKDYDGDSKNQKRRTNDRDEKGNDELVVYRILCPDGVIGSVIGKSGKV 195
MGETGKR R SQ+D DGD+K QKRR N+RDEKG+DEL+VYRILCPDGVIGSVIGKSGKV
Sbjct: 1 MGETGKRFR--SQRDQDGDNKIQKRRVNERDEKGSDELIVYRILCPDGVIGSVIGKSGKV 58
Query: 196 INTIRQESRAKVKVVDPFPGAKDRVLTIYCYXXXXXXXXXXXXXXXXXPLCAAQDALMKV 375
IN+IRQ++RAK+KVVDPFPGAKDRV+TIYCY PLC AQDAL+KV
Sbjct: 59 INSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKV 118
Query: 376 HAAISNAVASVGDSDKKRKDKEECQLLVPSSQSANIIGKSGATIKKLRSKTRTNIKVTSK 555
HAAI NAVAS+ +SDKK+KDKEECQ+LVPSSQSAN+IGK+GATIK+LRSKTR NIK+T+K
Sbjct: 119 HAAIVNAVASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAK 178
Query: 556 DATDPTHSCAMEFDNFIQITGDSEAVKKALFAVSAIMYKFTPKEDIPLDTXXXXXXXXXX 735
D+TDP+HSCAMEFDNF+ I GDSEAVKKALFA+SAIMYKFTP+E+IPLDT
Sbjct: 179 DSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSII 238
Query: 736 XXXXXXXXXAAGLYQNVDSIVSSRPLPSILGAAHVPELSGYADTGSAWPVYSSALPVVSG 915
A G Y + DSIVS+R +P +L A HVPEL GY+D GS WPVYSS LPVVSG
Sbjct: 239 IPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSG 298
Query: 916 YGGASRSEELIIRVLCSFSKIGRVIGKGGASIKSVRQASGARVEVDDKKADRDECIITIT 1095
Y GASRSEELIIRVLC F KIGRVIG+GG+SIKSVR+ASGA VEVDD KADRDEC+IT+T
Sbjct: 299 Y-GASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVT 357
Query: 1096 ATETLEDMKSMAVEAVLLLQEKINDEDDDTVSIRLLVP 1209
+TE+++D+KSMAVEAVLLLQ KINDEDDDTV+IRLLVP
Sbjct: 358 STESVDDLKSMAVEAVLLLQAKINDEDDDTVAIRLLVP 395
>emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 572 bits (1475), Expect = e-161
Identities = 290/398 (72%), Positives = 332/398 (83%)
Frame = +1
Query: 16 MGETGKRSRNRSQKDYDGDSKNQKRRTNDRDEKGNDELVVYRILCPDGVIGSVIGKSGKV 195
MGETGKR R SQ+D DGD+K QKRR N+RDEKG+DEL+VYRILCPDGVIGSVIGKSGKV
Sbjct: 1 MGETGKRFR--SQRDQDGDNKIQKRRVNERDEKGSDELIVYRILCPDGVIGSVIGKSGKV 58
Query: 196 INTIRQESRAKVKVVDPFPGAKDRVLTIYCYXXXXXXXXXXXXXXXXXPLCAAQDALMKV 375
IN+IRQ++RAK+KVVDPFPGAKDRV+TIYCY PLC AQDAL+KV
Sbjct: 59 INSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKV 118
Query: 376 HAAISNAVASVGDSDKKRKDKEECQLLVPSSQSANIIGKSGATIKKLRSKTRTNIKVTSK 555
HAAI NAVAS+ +SDKK+KDKEECQ+LVPSSQSAN+IGK+GATIK+LRSKTR NIK+T+K
Sbjct: 119 HAAIVNAVASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAK 178
Query: 556 DATDPTHSCAMEFDNFIQITGDSEAVKKALFAVSAIMYKFTPKEDIPLDTXXXXXXXXXX 735
D+TDP+HSCAMEFDNF+ I GDSEAVKKALFA+SAIMYKFTP+E+IPLDT
Sbjct: 179 DSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSII 238
Query: 736 XXXXXXXXXAAGLYQNVDSIVSSRPLPSILGAAHVPELSGYADTGSAWPVYSSALPVVSG 915
A G Y + DSIVS+R +P +L A HVPEL GY+D GS WPVYSS LPVVSG
Sbjct: 239 IPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSG 298
Query: 916 YGGASRSEELIIRVLCSFSKIGRVIGKGGASIKSVRQASGARVEVDDKKADRDECIITIT 1095
Y GASRSEELIIRVLC F KIGRVIG+GG+SIKSVR+ASGA VEVDD KADRDEC+IT+T
Sbjct: 299 Y-GASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVT 357
Query: 1096 ATETLEDMKSMAVEAVLLLQEKINDEDDDTVSIRLLVP 1209
+TE+++D+KSMAVEAVLLLQ KINDEDDDTV+IRLLVP
Sbjct: 358 STESVDDLKSMAVEAVLLLQAKINDEDDDTVAIRLLVP 395
>ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
Length = 625
Score = 540 bits (1392), Expect = e-151
Identities = 276/398 (69%), Positives = 322/398 (80%)
Frame = +1
Query: 16 MGETGKRSRNRSQKDYDGDSKNQKRRTNDRDEKGNDELVVYRILCPDGVIGSVIGKSGKV 195
MGETGKR SQ+D+DGD K+QKRR DRD++GNDEL+VYRILCPD VIGSVIGK+GKV
Sbjct: 1 MGETGKRYH--SQRDHDGDRKHQKRRMTDRDDRGNDELIVYRILCPDEVIGSVIGKNGKV 58
Query: 196 INTIRQESRAKVKVVDPFPGAKDRVLTIYCYXXXXXXXXXXXXXXXXXPLCAAQDALMKV 375
IN+IRQE+RAKVKVVDPFPG+KDRV+TIYCY PLCAAQDAL+KV
Sbjct: 59 INSIRQETRAKVKVVDPFPGSKDRVITIYCYVKEKEDVEIDDEFAGKEPLCAAQDALLKV 118
Query: 376 HAAISNAVASVGDSDKKRKDKEECQLLVPSSQSANIIGKSGATIKKLRSKTRTNIKVTSK 555
H AI+N++A++GDS+KKRKD++ECQ+LVPSSQSANIIGK+GATIKKLRSKTR NIKVT+K
Sbjct: 119 HVAIANSIAAIGDSEKKRKDRDECQILVPSSQSANIIGKAGATIKKLRSKTRANIKVTAK 178
Query: 556 DATDPTHSCAMEFDNFIQITGDSEAVKKALFAVSAIMYKFTPKEDIPLDTXXXXXXXXXX 735
DA DPTHSCAMEFDNF+ ITG+SEAVK+ALFAVS+IMYKF P+EDI LDT
Sbjct: 179 DAADPTHSCAMEFDNFVVITGESEAVKRALFAVSSIMYKFGPREDISLDTAVPEAPPSII 238
Query: 736 XXXXXXXXXAAGLYQNVDSIVSSRPLPSILGAAHVPELSGYADTGSAWPVYSSALPVVSG 915
GLY D IV+ R +P I+GA +VP+L GYAD G++WP+YSSALPVVSG
Sbjct: 239 IPSDVPVYPPGGLYPASDPIVTPRAVPQIIGATNVPDLQGYADAGNSWPMYSSALPVVSG 298
Query: 916 YGGASRSEELIIRVLCSFSKIGRVIGKGGASIKSVRQASGARVEVDDKKADRDECIITIT 1095
GASRSEELIIR+LC KIGRVIGKGG++IKS+RQASGA +EVDD KA+ DEC+I IT
Sbjct: 299 V-GASRSEELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIIT 357
Query: 1096 ATETLEDMKSMAVEAVLLLQEKINDEDDDTVSIRLLVP 1209
TE+ D+KSMAVEAVLL+Q KINDEDD TVSIRLLVP
Sbjct: 358 TTESPSDLKSMAVEAVLLMQGKINDEDDTTVSIRLLVP 395
>ref|XP_002305041.1| predicted protein [Populus trichocarpa] gi|222848005|gb|EEE85552.1|
predicted protein [Populus trichocarpa]
Length = 623
Score = 520 bits (1340), Expect = e-145
Identities = 271/400 (67%), Positives = 313/400 (78%), Gaps = 2/400 (0%)
Frame = +1
Query: 16 MGETGKRSRNRSQKDYDGDSKNQKRRTNDRDEKG--NDELVVYRILCPDGVIGSVIGKSG 189
M E+GKRSR Q+DYDGD+ NQKR +D KG NDELVVYRILCPD VIGSVIGKSG
Sbjct: 1 MVESGKRSR--PQRDYDGDTNNQKRH---KDNKGTDNDELVVYRILCPDEVIGSVIGKSG 55
Query: 190 KVINTIRQESRAKVKVVDPFPGAKDRVLTIYCYXXXXXXXXXXXXXXXXXPLCAAQDALM 369
KVIN+IR ESRA+VKVVDPFPGA RV+TIYC PLC AQDAL+
Sbjct: 56 KVINSIRNESRARVKVVDPFPGAMYRVITIYCNVKEKGDADVDDDFHQADPLCPAQDALL 115
Query: 370 KVHAAISNAVASVGDSDKKRKDKEECQLLVPSSQSANIIGKSGATIKKLRSKTRTNIKVT 549
KVHAAISNAVA++GDSDK+ +DK+ECQ+LVP+SQSANIIGK+GATIKKLRSKTR NIK+T
Sbjct: 116 KVHAAISNAVAALGDSDKRCRDKKECQILVPTSQSANIIGKAGATIKKLRSKTRANIKIT 175
Query: 550 SKDATDPTHSCAMEFDNFIQITGDSEAVKKALFAVSAIMYKFTPKEDIPLDTXXXXXXXX 729
+KDA+DPTHSCAM+FDNF+ ITG+SEAVKKALFAVSAIMYKF+PKE+IPL+T
Sbjct: 176 AKDASDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFSPKEEIPLETTVPEAPPS 235
Query: 730 XXXXXXXXXXXAAGLYQNVDSIVSSRPLPSILGAAHVPELSGYADTGSAWPVYSSALPVV 909
G Y N D IVSSR +P ILGA H+PE GY D S+WP+YSS +PVV
Sbjct: 236 IIISSDVPIYQPGGFYPNADPIVSSRSVPPILGATHIPEFQGYGDMRSSWPIYSSTVPVV 295
Query: 910 SGYGGASRSEELIIRVLCSFSKIGRVIGKGGASIKSVRQASGARVEVDDKKADRDECIIT 1089
+G SRS ELIIR+LC F KIGRVIGKGG++IKS+RQ SGAR+EVDD KADRDECIIT
Sbjct: 296 PSFGNTSRS-ELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIIT 354
Query: 1090 ITATETLEDMKSMAVEAVLLLQEKINDEDDDTVSIRLLVP 1209
+ ATE+ +D+KSMAVEA+LLLQ KINDED+D V IR LVP
Sbjct: 355 VIATESPDDLKSMAVEAILLLQGKINDEDNDIVGIRFLVP 394
Score = 90.5 bits (223), Expect = 8e-16
Identities = 89/362 (24%), Positives = 152/362 (41%), Gaps = 22/362 (6%)
Frame = +1
Query: 130 VVYRILCPDGVIGSVIGKSGKVINTIRQESRAKVKVVDPFPGAKDRVLTIYCYXXXXXXX 309
++ R+LCP IG VIGK G I +IRQ S A+++V D + ++T+
Sbjct: 306 LIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIATE------ 359
Query: 310 XXXXXXXXXXPLCAAQDALMKVHAAISNAVASVGDSDKKRKDKEECQLLVPSSQSANIIG 489
+ D AI + D D D + LVPS IIG
Sbjct: 360 -------------SPDDLKSMAVEAILLLQGKINDEDN---DIVGIRFLVPSKVIGCIIG 403
Query: 490 KSGATIKKLRSKTRTNIKVTSKDATDPTHSCAMEFDNFIQITGDSEAVKKALFAVSAIMY 669
KSGA + ++R +T ++ ++ D CA D +++ G+ +V+ AL + +
Sbjct: 404 KSGAIVNEIRKRTNADVCISKVDKL----KCADSNDELVEVAGEVGSVRDALVQIVLRLR 459
Query: 670 KFTPKE-DIPLDTXXXXXXXXXXXXXXXXXXXAAGLYQNVDSIVSSRPLPSILGAAHVPE 846
KE D L++ +V + + +PSIL +
Sbjct: 460 DDVLKEKDGGLNSSVGT--------------------DSVYPVHAGISIPSILPSVPPVA 499
Query: 847 LSGY---ADTGSAWPVYSS-------ALPVVSGYGGASRSEEL-----------IIRVLC 963
GY A++GS ++SS +LP+ G+ S L + +L
Sbjct: 500 PMGYDQRAESGSGLGLFSSSSLYGYGSLPMGENSYGSLASYSLSKLYEGLPPPSTLEMLV 559
Query: 964 SFSKIGRVIGKGGASIKSVRQASGARVEVDDKKADRDECIITITATETLEDMKSMAVEAV 1143
+ +G+VIGKGGA+I ++R+ SGA +E+ D K+ R + I I+ + ++A
Sbjct: 560 PANAVGKVIGKGGANIANIRKISGAMIEISDAKSARGDRIAYISGKPEQKQAAENLIQAF 619
Query: 1144 LL 1149
++
Sbjct: 620 IM 621
>ref|XP_002317286.1| predicted protein [Populus trichocarpa] gi|222860351|gb|EEE97898.1|
predicted protein [Populus trichocarpa]
Length = 363
Score = 493 bits (1269), Expect = e-137
Identities = 249/363 (68%), Positives = 288/363 (79%)
Frame = +1
Query: 16 MGETGKRSRNRSQKDYDGDSKNQKRRTNDRDEKGNDELVVYRILCPDGVIGSVIGKSGKV 195
M E+GKRSR Q+DYDGD+ NQKR +D+ ND L+VYRILCPDGVIGSVIGKSGKV
Sbjct: 1 MVESGKRSR--PQRDYDGDTNNQKRHKDDKGTN-NDGLIVYRILCPDGVIGSVIGKSGKV 57
Query: 196 INTIRQESRAKVKVVDPFPGAKDRVLTIYCYXXXXXXXXXXXXXXXXXPLCAAQDALMKV 375
IN+IR ESRA+VKVVDPFPGAKDR++TIYC+ PLCAAQDAL+KV
Sbjct: 58 INSIRHESRARVKVVDPFPGAKDRIITIYCHIKEKEDVDVDDDFNHTNPLCAAQDALLKV 117
Query: 376 HAAISNAVASVGDSDKKRKDKEECQLLVPSSQSANIIGKSGATIKKLRSKTRTNIKVTSK 555
HAAISNAVAS+GDSDK+ +DKEECQ+LVP+SQSANIIGK+GATIK+LRSKTRT+IK+ +K
Sbjct: 118 HAAISNAVASLGDSDKRLRDKEECQILVPASQSANIIGKAGATIKRLRSKTRTSIKIIAK 177
Query: 556 DATDPTHSCAMEFDNFIQITGDSEAVKKALFAVSAIMYKFTPKEDIPLDTXXXXXXXXXX 735
D+TDPTHSCAM+FDNF+ ITG+SEAVKKALFAVSAIMYKF PKE+IPL+
Sbjct: 178 DSTDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFNPKEEIPLEATVPEPPPSII 237
Query: 736 XXXXXXXXXAAGLYQNVDSIVSSRPLPSILGAAHVPELSGYADTGSAWPVYSSALPVVSG 915
G Y N + IVSSR +P ILGA H+PEL GY D GS+WPVY+S LPVV
Sbjct: 238 IPSDVPIYQPGGFYPNAEPIVSSRSVPPILGATHIPELQGYGDMGSSWPVYTSTLPVVPS 297
Query: 916 YGGASRSEELIIRVLCSFSKIGRVIGKGGASIKSVRQASGARVEVDDKKADRDECIITIT 1095
+G SR EELIIRVLC F KIGRVIGKGG++IKS+RQASGAR+EVDD KADRDECIIT+T
Sbjct: 298 FGNVSRYEELIIRVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECIITVT 357
Query: 1096 ATE 1104
ATE
Sbjct: 358 ATE 360