BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004565
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300344.1| predicted protein [Populus trichocarpa] gi|2...   250   3e-83
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                 247   9e-83
ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus ...   247   9e-83
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]               246   3e-82
ref|XP_002317355.1| predicted protein [Populus trichocarpa] gi|2...   247   1e-81

>ref|XP_002300344.1| predicted protein [Populus trichocarpa] gi|222847602|gb|EEE85149.1|
           predicted protein [Populus trichocarpa]
          Length = 877

 Score =  250 bits (639), Expect(2) = 3e-83
 Identities = 116/128 (90%), Positives = 123/128 (96%)
 Frame = -1

Query: 384 DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQSWK 205
           +GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRPSDITINIGKDAPIPECPIPG+ WK
Sbjct: 458 NGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDITINIGKDAPIPECPIPGERWK 517

Query: 204 EIRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKGYIEGIRAAY 25
           E++HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+RKLK YI  IRAAY
Sbjct: 518 EVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRAAY 577

Query: 24  TKNFSSKD 1
           TK+F+SKD
Sbjct: 578 TKDFASKD 585



 Score = 84.3 bits (207), Expect(2) = 3e-83
 Identities = 34/49 (69%), Positives = 42/49 (85%)
 Frame = -3

Query: 631 KPMFIENFMSDWKKILGKTNIIQNFKDCDFDPIYEWHQREKEKKKQMST 485
           KP F +NF +DW+K+LGK ++IQ   DCDF+PIYEWHQ+EKEKKKQMST
Sbjct: 387 KPQFRQNFWNDWRKLLGKNHVIQKLDDCDFNPIYEWHQQEKEKKKQMST 435


>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score =  247 bits (631), Expect(2) = 9e-83
 Identities = 114/128 (89%), Positives = 122/128 (95%)
 Frame = -1

Query: 384 DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQSWK 205
           DG KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINIGKDAPIPECP+PG+ WK
Sbjct: 489 DGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGERWK 548

Query: 204 EIRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKGYIEGIRAAY 25
           E+RHDNTVTWLAFWNDPINPKEFKYVFLAASS+LKG SDKEKYEK+R LK YI+GIRAAY
Sbjct: 549 EVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIRAAY 608

Query: 24  TKNFSSKD 1
           TK+F+SKD
Sbjct: 609 TKDFASKD 616



 Score = 85.9 bits (211), Expect(2) = 9e-83
 Identities = 36/49 (73%), Positives = 41/49 (83%)
 Frame = -3

Query: 631 KPMFIENFMSDWKKILGKTNIIQNFKDCDFDPIYEWHQREKEKKKQMST 485
           KP F ENF  DWKKILGK ++IQN ++CDF PIYEWHQ EKEKKKQM+T
Sbjct: 418 KPRFKENFFGDWKKILGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTT 466


>ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis]
           gi|223531500|gb|EEF33331.1| DNA topoisomerase type I,
           putative [Ricinus communis]
          Length = 891

 Score =  247 bits (630), Expect(2) = 9e-83
 Identities = 115/128 (89%), Positives = 121/128 (94%)
 Frame = -1

Query: 384 DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQSWK 205
           DGVKEKVGNFRVEPP LFRGRGEHPKMGKLKKRI+PSDITINIGKDAPIPECPIPG+SWK
Sbjct: 471 DGVKEKVGNFRVEPPALFRGRGEHPKMGKLKKRIQPSDITINIGKDAPIPECPIPGESWK 530

Query: 204 EIRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKGYIEGIRAAY 25
           E++HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+RKLK YI  IRAAY
Sbjct: 531 EVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRAAY 590

Query: 24  TKNFSSKD 1
            K+  SKD
Sbjct: 591 QKDLRSKD 598



 Score = 86.3 bits (212), Expect(2) = 9e-83
 Identities = 34/49 (69%), Positives = 43/49 (87%)
 Frame = -3

Query: 631 KPMFIENFMSDWKKILGKTNIIQNFKDCDFDPIYEWHQREKEKKKQMST 485
           KP F+ENF +DW+K+LG+ ++IQ  +DCDF PIYEWH+REKEKKKQMST
Sbjct: 400 KPKFLENFWNDWRKLLGRNHVIQKLEDCDFTPIYEWHEREKEKKKQMST 448


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score =  246 bits (627), Expect(2) = 3e-82
 Identities = 115/128 (89%), Positives = 123/128 (96%)
 Frame = -1

Query: 384 DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQSWK 205
           +GVKEKVGNFRVEPP LFRGRGEHPKMGKLKK IRPSDITINIGKDAPIPECPIPG+SWK
Sbjct: 475 NGVKEKVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINIGKDAPIPECPIPGESWK 534

Query: 204 EIRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKGYIEGIRAAY 25
           EIRHDNTVTWLAFWNDPI P+EFKYVFLAASSSLKGQSDKEKYEK+R LK +I+GIRAAY
Sbjct: 535 EIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKYEKARLLKDFIQGIRAAY 594

Query: 24  TKNFSSKD 1
           TK+F+SKD
Sbjct: 595 TKDFASKD 602



 Score = 85.9 bits (211), Expect(2) = 3e-82
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = -3

Query: 634 TKPMFIENFMSDWKKILGKTNIIQNFKDCDFDPIYEWHQREKEKKKQMS 488
           TK  F ENFM DW+KILGK ++IQN +DCDF PIYEWHQREKEKKK+M+
Sbjct: 403 TKSKFKENFMDDWRKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMT 451


>ref|XP_002317355.1| predicted protein [Populus trichocarpa] gi|222860420|gb|EEE97967.1|
           predicted protein [Populus trichocarpa]
          Length = 860

 Score =  247 bits (631), Expect(2) = 1e-81
 Identities = 114/128 (89%), Positives = 122/128 (95%)
 Frame = -1

Query: 384 DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQSWK 205
           +GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRPSDITINIGKDAPIP+CPIPG+ WK
Sbjct: 441 NGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDITINIGKDAPIPKCPIPGERWK 500

Query: 204 EIRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKGYIEGIRAAY 25
           E++HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+RKLK YI  IR AY
Sbjct: 501 EVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRTAY 560

Query: 24  TKNFSSKD 1
           TK+F+SKD
Sbjct: 561 TKDFASKD 568



 Score = 82.0 bits (201), Expect(2) = 1e-81
 Identities = 32/49 (65%), Positives = 42/49 (85%)
 Frame = -3

Query: 631 KPMFIENFMSDWKKILGKTNIIQNFKDCDFDPIYEWHQREKEKKKQMST 485
           KP F++NF +DW+ +LGK ++IQ  + CDF+PIYEWHQ+EKEKKKQMST
Sbjct: 370 KPQFLQNFWNDWRTLLGKNHVIQKLEACDFNPIYEWHQKEKEKKKQMST 418