BLASTX nr result

ID: Panax21_contig00004564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004564
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632628.1| PREDICTED: LOW QUALITY PROTEIN: DNA replicat...   359   5e-97
ref|XP_002525183.1| DNA replication licensing factor MCM8, putat...   335   7e-90
ref|XP_002326332.1| predicted protein [Populus trichocarpa] gi|2...   324   2e-86
ref|XP_003553539.1| PREDICTED: DNA replication licensing factor ...   315   1e-83
ref|XP_004137962.1| PREDICTED: DNA helicase MCM8-like [Cucumis s...   308   2e-81

>ref|XP_003632628.1| PREDICTED: LOW QUALITY PROTEIN: DNA replication licensing factor
           MCM8-like [Vitis vinifera]
          Length = 754

 Score =  359 bits (922), Expect = 5e-97
 Identities = 174/250 (69%), Positives = 210/250 (84%)
 Frame = -2

Query: 751 EITHILSKYFSQIDFSLDDSESKFRLTTELVRFFSSSAGQYILSQVKGDGDIFFLAIDFQ 572
           +IT +L+ YF +I  S +D   +  +T++L+ FFSS + Q  +SQVK D DIF L++DF+
Sbjct: 16  DITKVLATYFPEIQLSANDP--RLHVTSQLIHFFSSPSAQQFVSQVKNDDDIFSLSLDFK 73

Query: 571 HFQKVCELGEFYATLEEKPKEALLCMSSAVHKVLSTKGDGNKMEDSVKINICLHNYPESM 392
            F K+C+L +FYA L+ KPKEALLCMS+AVHKVLST  D N++ED VKINI LHN+PE+M
Sbjct: 74  QFHKICDLEDFYAALDTKPKEALLCMSAAVHKVLSTNWDDNRLEDGVKINIRLHNHPETM 133

Query: 391 IALKNLKAAYIDRLVSVRGTVVKVSTVRPLVIQMSFSCTKCGTLIRRDFPDGKFSPPSVC 212
           IALKNLK+AYID+LVSVRGTVVK STV+PLV+QM+F+C KC T I R F DGKFSPPSVC
Sbjct: 134 IALKNLKSAYIDKLVSVRGTVVKASTVKPLVVQMTFACVKCQTNILRIFHDGKFSPPSVC 193

Query: 211 VVHGCKSRTFNPVRSTALPIDFQKIRLQELLKAEHHEEGRVPRTVECELTEDLVDTCIPG 32
            +HGCKSRTF P+RSTA PIDFQKIRLQE+LK+E+HEEGRVPRTVECELTEDLVD CIPG
Sbjct: 194 TLHGCKSRTFTPIRSTAQPIDFQKIRLQEILKSENHEEGRVPRTVECELTEDLVDACIPG 253

Query: 31  DVVTVTGIIK 2
           DVVTVTGII+
Sbjct: 254 DVVTVTGIIR 263


>ref|XP_002525183.1| DNA replication licensing factor MCM8, putative [Ricinus communis]
           gi|223535480|gb|EEF37149.1| DNA replication licensing
           factor MCM8, putative [Ricinus communis]
          Length = 757

 Score =  335 bits (860), Expect = 7e-90
 Identities = 171/270 (63%), Positives = 210/270 (77%), Gaps = 4/270 (1%)
 Frame = -2

Query: 799 GREISGT----KERSAIHSNEITHILSKYFSQIDFSLDDSESKFRLTTELVRFFSSSAGQ 632
           GR++  T    + R    ++  T IL+ YF   D ++D  E K  L ++L+ FFS+S GQ
Sbjct: 3   GRKVEHTSMNNQHRWMNQASNSTDILAAYFPSNDMTVD--EDKLILISKLINFFSTSRGQ 60

Query: 631 YILSQVKGDGDIFFLAIDFQHFQKVCELGEFYATLEEKPKEALLCMSSAVHKVLSTKGDG 452
            + SQVK +    FL IDFQ F+K+C++ EFYA LEEKPK AL C+ +A+HKVL  K + 
Sbjct: 61  DLASQVKEENGALFLPIDFQQFRKICDVDEFYAILEEKPKIALSCLGAALHKVLLAKLEE 120

Query: 451 NKMEDSVKINICLHNYPESMIALKNLKAAYIDRLVSVRGTVVKVSTVRPLVIQMSFSCTK 272
           N +ED  KINI LHNYPESMIALKNLKAAYID+LVSVRGTVVK+STVRPLV+QMSF C K
Sbjct: 121 NILEDGAKINIRLHNYPESMIALKNLKAAYIDKLVSVRGTVVKLSTVRPLVVQMSFDCEK 180

Query: 271 CGTLIRRDFPDGKFSPPSVCVVHGCKSRTFNPVRSTALPIDFQKIRLQELLKAEHHEEGR 92
           C + I R FPDGKFSPP++C ++GCKS+TF+P+RS+A  IDFQKIR+QELL++E HEEGR
Sbjct: 181 CKSNIIRVFPDGKFSPPTICNLNGCKSKTFHPIRSSAQAIDFQKIRIQELLRSEDHEEGR 240

Query: 91  VPRTVECELTEDLVDTCIPGDVVTVTGIIK 2
           VPRTVECELTEDLVD CIPGDVVTVTGII+
Sbjct: 241 VPRTVECELTEDLVDACIPGDVVTVTGIIR 270


>ref|XP_002326332.1| predicted protein [Populus trichocarpa] gi|222833525|gb|EEE72002.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  324 bits (831), Expect = 2e-86
 Identities = 169/267 (63%), Positives = 203/267 (76%), Gaps = 1/267 (0%)
 Frame = -2

Query: 799 GREISGTKERSAIHSNEITHILSKYFSQIDFSLDDSESKFRLTTELVRFFSSSA-GQYIL 623
           G   S  K+     S+++ +IL+ Y    + ++D  E K  LT  L+ FFS++  G+ + 
Sbjct: 6   GESASRKKQHHHYASDDVVNILATYCPSNELAVD--EEKLMLTCHLIHFFSNTPPGEDLA 63

Query: 622 SQVKGDGDIFFLAIDFQHFQKVCELGEFYATLEEKPKEALLCMSSAVHKVLSTKGDGNKM 443
           SQVK     ++L+IDFQ FQ + EL EFYATLEEKPK AL CM +AVHK        N +
Sbjct: 64  SQVKDKNGAYYLSIDFQQFQNIRELEEFYATLEEKPKVALSCMGAAVHK-------DNFL 116

Query: 442 EDSVKINICLHNYPESMIALKNLKAAYIDRLVSVRGTVVKVSTVRPLVIQMSFSCTKCGT 263
           +D +KINI LHNYPESMIALKNLKAAYID+LVSVRG+VVKVS VRPLV+QM+F+C KC  
Sbjct: 117 DDGMKINIRLHNYPESMIALKNLKAAYIDKLVSVRGSVVKVSNVRPLVVQMNFNCAKCKY 176

Query: 262 LIRRDFPDGKFSPPSVCVVHGCKSRTFNPVRSTALPIDFQKIRLQELLKAEHHEEGRVPR 83
            I R FPDGKFSPP+VC ++GCKSRTFNP+RS+A  IDFQKIRLQELL++E HEEGRVPR
Sbjct: 177 SILRIFPDGKFSPPTVCSLNGCKSRTFNPIRSSARAIDFQKIRLQELLRSEDHEEGRVPR 236

Query: 82  TVECELTEDLVDTCIPGDVVTVTGIIK 2
           TVECELTEDLVD CIPGDVVTVTGIIK
Sbjct: 237 TVECELTEDLVDACIPGDVVTVTGIIK 263


>ref|XP_003553539.1| PREDICTED: DNA replication licensing factor MCM8-like [Glycine max]
          Length = 742

 Score =  315 bits (806), Expect = 1e-83
 Identities = 160/246 (65%), Positives = 191/246 (77%)
 Frame = -2

Query: 739 ILSKYFSQIDFSLDDSESKFRLTTELVRFFSSSAGQYILSQVKGDGDIFFLAIDFQHFQK 560
           IL  YF Q  F++DD      LT+ L+ FFSS  GQ ++SQVK D   + L++DF   Q+
Sbjct: 9   ILGTYFPQQLFTVDDI--LLNLTSALLSFFSSPPGQNLVSQVKNDYGNYVLSLDFLQLQQ 66

Query: 559 VCELGEFYATLEEKPKEALLCMSSAVHKVLSTKGDGNKMEDSVKINICLHNYPESMIALK 380
           +C + EFY  L EKPK ALLCMS+AVHKVL +K +   +E   K++I LHN PE+MIALK
Sbjct: 67  ICHVEEFYKMLTEKPKIALLCMSAAVHKVLLSKWENGDLEHGAKVDIRLHNCPETMIALK 126

Query: 379 NLKAAYIDRLVSVRGTVVKVSTVRPLVIQMSFSCTKCGTLIRRDFPDGKFSPPSVCVVHG 200
           NLKAAYID+LVSVRGT VKVSTVRPLV++MSF C+KC   I R FPDGK+SPPS C ++G
Sbjct: 127 NLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECSKCKQSITRIFPDGKYSPPSTCNLNG 186

Query: 199 CKSRTFNPVRSTALPIDFQKIRLQELLKAEHHEEGRVPRTVECELTEDLVDTCIPGDVVT 20
           CKS+ FNP+RSTA  IDFQKIR+QELLK E HEEGRVPRTVECELT+DLVD CIPGDVVT
Sbjct: 187 CKSKFFNPLRSTAQTIDFQKIRVQELLKPEDHEEGRVPRTVECELTQDLVDACIPGDVVT 246

Query: 19  VTGIIK 2
           VTGII+
Sbjct: 247 VTGIIR 252


>ref|XP_004137962.1| PREDICTED: DNA helicase MCM8-like [Cucumis sativus]
          Length = 793

 Score =  308 bits (788), Expect = 2e-81
 Identities = 160/247 (64%), Positives = 191/247 (77%), Gaps = 1/247 (0%)
 Frame = -2

Query: 739 ILSKYFSQIDFSLDDSESKFRLTTELVRFFSSSAGQYILSQVKGDG-DIFFLAIDFQHFQ 563
           IL  YF +  F++++      L ++L+ FFSS AG+++ SQ   DG  IF L+IDFQ F+
Sbjct: 14  ILDLYFPRTVFTVENGW--LNLISQLIFFFSSPAGRHLSSQAVDDGRGIFILSIDFQQFR 71

Query: 562 KVCELGEFYATLEEKPKEALLCMSSAVHKVLSTKGDGNKMEDSVKINICLHNYPESMIAL 383
           K+C+  EFY  LEE PK AL CMS+A+H+V+ TK   N +E   KI + LHNY ESM+AL
Sbjct: 72  KICDQHEFYIMLEENPKVALKCMSAAIHQVMRTKWVHN-LEYVTKILVRLHNYSESMLAL 130

Query: 382 KNLKAAYIDRLVSVRGTVVKVSTVRPLVIQMSFSCTKCGTLIRRDFPDGKFSPPSVCVVH 203
           KNLKAAYID+LVSVRGTVVKVSTV+PLV+QMSF C KC + I   FPDGKFSPPS C + 
Sbjct: 131 KNLKAAYIDKLVSVRGTVVKVSTVKPLVVQMSFGCAKCKSHITLSFPDGKFSPPSFCELD 190

Query: 202 GCKSRTFNPVRSTALPIDFQKIRLQELLKAEHHEEGRVPRTVECELTEDLVDTCIPGDVV 23
           GCKS+TFNP+RSTA  IDFQKIRLQEL K + HEEGRVPRTVECELTEDLVD CIPGDVV
Sbjct: 191 GCKSKTFNPIRSTAEAIDFQKIRLQELTKPDDHEEGRVPRTVECELTEDLVDACIPGDVV 250

Query: 22  TVTGIIK 2
           TVTGII+
Sbjct: 251 TVTGIIR 257


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