BLASTX nr result
ID: Panax21_contig00004553
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00004553
(1645 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ... 382 e-103
ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putati... 378 e-102
ref|XP_002300091.1| predicted protein [Populus trichocarpa] gi|2... 366 1e-98
ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit ... 365 2e-98
ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit ... 365 2e-98
>ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera]
gi|296090247|emb|CBI40066.3| unnamed protein product
[Vitis vinifera]
Length = 424
Score = 382 bits (982), Expect = e-103
Identities = 200/272 (73%), Positives = 214/272 (78%)
Frame = +3
Query: 741 IYEVDQPRDLFLYCYYGGMICIGQKRFRKALELLHNVVTAPMSSISAIAVEAYKKYILVS 920
I+EVDQPRD FLYCYYGGMICIGQKRFRKALELLHNVVTAPMS+I+AIAVEAYKKYILVS
Sbjct: 167 IFEVDQPRDFFLYCYYGGMICIGQKRFRKALELLHNVVTAPMSTINAIAVEAYKKYILVS 226
Query: 921 LIHLGQCTTSFPKYTSSVVQRNLKNFTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1100
LIH GQ +T+FPKYTSSV QRNLKNF+Q
Sbjct: 227 LIHNGQFSTTFPKYTSSVAQRNLKNFSQPYLDLANSYSSGKISEPEKCIQTNREKFEADK 286
Query: 1101 XXXXXXXXXXXXXXXFGLVRQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEM 1280
GLV+QVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEM
Sbjct: 287 N--------------LGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEM 332
Query: 1281 HVLQMIQDGEIYATINQKDGMVRFLEDPEQYKSCEMIERIDSSIQRIMTLSKKLTATDEL 1460
HVLQMIQDGEI+ATINQKDGMVRF EDPEQYK+CEMIE IDSSIQRIMTLSKKLT DEL
Sbjct: 333 HVLQMIQDGEIFATINQKDGMVRFQEDPEQYKTCEMIEHIDSSIQRIMTLSKKLTTMDEL 392
Query: 1461 MSCDPAYLSRAGKERPRFDFDDYDSVPQKFNI 1556
+SCDP YL++AG+ER RFDFDDYD+VPQKFNI
Sbjct: 393 ISCDPLYLAKAGRERQRFDFDDYDTVPQKFNI 424
Score = 210 bits (534), Expect = 1e-51
Identities = 102/141 (72%), Positives = 124/141 (87%)
Frame = +2
Query: 191 SVESVVAQIQGLSSSAQDIAHLHSLLKQSEDLVHSESTHLAPFLSELDPSIHSLGYLYIL 370
SVE+VV QIQGLS + DI+ LHSLLKQ++DL+H+EST LAPFL +LDPSIH+LGYLY+L
Sbjct: 3 SVEAVVTQIQGLSGGSGDISLLHSLLKQADDLLHNESTRLAPFLEQLDPSIHTLGYLYLL 62
Query: 371 EACTSAPSTKDQANELVLSIARFINSCAAEQIRLVPDKFIAVCRRFKDQVILLKAPMRGV 550
EACTS P K+QAN+LVLSIA FIN+C+AEQI L PDKF+++C+R KDQVILL+APMRGV
Sbjct: 63 EACTSTPIPKEQANQLVLSIANFINNCSAEQIHLAPDKFVSLCKRLKDQVILLEAPMRGV 122
Query: 551 APLLTAIRKLQLSSEHLTTLH 613
AP+LTA+RKLQ +SE LT LH
Sbjct: 123 APMLTAVRKLQSASELLTVLH 143
>ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
gi|223549455|gb|EEF50943.1| 26S proteasome regulatory
subunit S3, putative [Ricinus communis]
Length = 427
Score = 378 bits (970), Expect = e-102
Identities = 199/272 (73%), Positives = 210/272 (77%)
Frame = +3
Query: 741 IYEVDQPRDLFLYCYYGGMICIGQKRFRKALELLHNVVTAPMSSISAIAVEAYKKYILVS 920
I+EVDQPRDLFLY YYGGM+CIGQKRFRKALELLHNVVTAPMSSI+AIAVEAYKKYIL S
Sbjct: 170 IFEVDQPRDLFLYSYYGGMVCIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILAS 229
Query: 921 LIHLGQCTTSFPKYTSSVVQRNLKNFTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1100
LIH GQ +TS PKY SS QRNLKNF Q
Sbjct: 230 LIHQGQFSTSLPKYASSAAQRNLKNFCQPYIELANSYSTGKIAELETYVQTNREKFESDN 289
Query: 1101 XXXXXXXXXXXXXXXFGLVRQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEM 1280
GLV+QVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEM
Sbjct: 290 N--------------LGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEM 335
Query: 1281 HVLQMIQDGEIYATINQKDGMVRFLEDPEQYKSCEMIERIDSSIQRIMTLSKKLTATDEL 1460
HVLQMIQDGEIYATINQKDGMVRFLEDPEQYK+CEMIE IDSSIQRIM LSKKLTA DEL
Sbjct: 336 HVLQMIQDGEIYATINQKDGMVRFLEDPEQYKTCEMIEHIDSSIQRIMNLSKKLTAMDEL 395
Query: 1461 MSCDPAYLSRAGKERPRFDFDDYDSVPQKFNI 1556
MSCDP YL++AG+ER RFDFDD+D+VPQKFNI
Sbjct: 396 MSCDPLYLAKAGRERQRFDFDDFDTVPQKFNI 427
Score = 208 bits (529), Expect = 4e-51
Identities = 104/146 (71%), Positives = 124/146 (84%), Gaps = 1/146 (0%)
Frame = +2
Query: 179 MNSVSVESVVAQIQGLSSSAQDIAHLHSLLKQSEDLVHSES-THLAPFLSELDPSIHSLG 355
MNS S+ES+V QIQGLSSSA DI+ LH+ LKQ++D +HS+S T L PFL +LDPS+HSLG
Sbjct: 1 MNSGSIESLVTQIQGLSSSATDISALHNYLKQADDSLHSDSPTRLLPFLDQLDPSVHSLG 60
Query: 356 YLYILEACTSAPSTKDQANELVLSIARFINSCAAEQIRLVPDKFIAVCRRFKDQVILLKA 535
YLY LEACTS P +K+QA LVL +ARF+ SCAA+QIRL PDKFI+VC+RFKDQV+LL+
Sbjct: 61 YLYFLEACTSGPISKEQARTLVLILARFVTSCAADQIRLAPDKFISVCKRFKDQVMLLEE 120
Query: 536 PMRGVAPLLTAIRKLQLSSEHLTTLH 613
PMRGVAPLL A+RKLQ SS HLTTLH
Sbjct: 121 PMRGVAPLLAAVRKLQSSSVHLTTLH 146
>ref|XP_002300091.1| predicted protein [Populus trichocarpa] gi|222847349|gb|EEE84896.1|
predicted protein [Populus trichocarpa]
Length = 423
Score = 366 bits (939), Expect = 1e-98
Identities = 191/272 (70%), Positives = 209/272 (76%)
Frame = +3
Query: 741 IYEVDQPRDLFLYCYYGGMICIGQKRFRKALELLHNVVTAPMSSISAIAVEAYKKYILVS 920
I+EVDQPRD +LYCYYGGMICIGQKRF+KALELLHNVVTAPMSSI+AIAVEA+KKY+LVS
Sbjct: 166 IFEVDQPRDFYLYCYYGGMICIGQKRFQKALELLHNVVTAPMSSINAIAVEAFKKYVLVS 225
Query: 921 LIHLGQCTTSFPKYTSSVVQRNLKNFTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1100
LI+ GQ +TS PKYTSS QRNLK Q
Sbjct: 226 LIYNGQFSTSLPKYTSSAAQRNLKTICQPYIELANTYSIGKISELEPYIQTNREKFDSDN 285
Query: 1101 XXXXXXXXXXXXXXXFGLVRQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEM 1280
GLV+QVV+SMYKRNIQRLTQTYLTLSLQDIANTVQL+SPKEAEM
Sbjct: 286 N--------------LGLVKQVVTSMYKRNIQRLTQTYLTLSLQDIANTVQLSSPKEAEM 331
Query: 1281 HVLQMIQDGEIYATINQKDGMVRFLEDPEQYKSCEMIERIDSSIQRIMTLSKKLTATDEL 1460
HVLQMIQDGEIYATINQ+DGMVRFLEDPEQYK+CEMIE IDSSIQRIMTLSKKLTA DEL
Sbjct: 332 HVLQMIQDGEIYATINQRDGMVRFLEDPEQYKTCEMIEHIDSSIQRIMTLSKKLTAMDEL 391
Query: 1461 MSCDPAYLSRAGKERPRFDFDDYDSVPQKFNI 1556
+SCDP YL++ G+ER RFDFDD+D VPQKFNI
Sbjct: 392 ISCDPLYLAKVGRERQRFDFDDFDPVPQKFNI 423
Score = 190 bits (483), Expect = 8e-46
Identities = 94/141 (66%), Positives = 120/141 (85%)
Frame = +2
Query: 191 SVESVVAQIQGLSSSAQDIAHLHSLLKQSEDLVHSESTHLAPFLSELDPSIHSLGYLYIL 370
+VES+VAQIQGLSSSA D++ L + LKQ+++ +H+EST L PFL +LDP++HSLGYLYIL
Sbjct: 3 TVESLVAQIQGLSSSAGDLSLLLTHLKQADEFLHNESTRLLPFLEQLDPTLHSLGYLYIL 62
Query: 371 EACTSAPSTKDQANELVLSIARFINSCAAEQIRLVPDKFIAVCRRFKDQVILLKAPMRGV 550
EACTS P T DQA LVL ++RF+ SC A+QIRL P+KFIAVC+ FKDQV++L+AP+RGV
Sbjct: 63 EACTSWPVTNDQARRLVLILSRFLTSCVADQIRLAPEKFIAVCKSFKDQVLMLEAPIRGV 122
Query: 551 APLLTAIRKLQLSSEHLTTLH 613
PLL A++KL+ SSEHLTTLH
Sbjct: 123 VPLLEAVKKLR-SSEHLTTLH 142
>ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2 [Glycine
max]
Length = 423
Score = 365 bits (937), Expect = 2e-98
Identities = 193/272 (70%), Positives = 210/272 (77%)
Frame = +3
Query: 741 IYEVDQPRDLFLYCYYGGMICIGQKRFRKALELLHNVVTAPMSSISAIAVEAYKKYILVS 920
++EVDQPRDLFLYCYYGGMICIGQKRF+KAL+LLHNVVTAPMS+I+AIAVEAYKKYILVS
Sbjct: 167 VFEVDQPRDLFLYCYYGGMICIGQKRFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVS 226
Query: 921 LIHLGQCTTSFPKYTSSVVQRNLKNFTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1100
LI GQ +TS PKY+SS QRNLKNF Q
Sbjct: 227 LIRHGQFSTSLPKYSSSTAQRNLKNFCQPYVELANSYGTGKIAELEAYVKANAEKFESDN 286
Query: 1101 XXXXXXXXXXXXXXXFGLVRQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEM 1280
GLV+QVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEM
Sbjct: 287 N--------------LGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEM 332
Query: 1281 HVLQMIQDGEIYATINQKDGMVRFLEDPEQYKSCEMIERIDSSIQRIMTLSKKLTATDEL 1460
HVLQMIQDGEIYATINQKDGMVRFLEDPEQYK+CEMIE IDSSIQRIM LS+KLTATDE
Sbjct: 333 HVLQMIQDGEIYATINQKDGMVRFLEDPEQYKTCEMIEHIDSSIQRIMALSRKLTATDEQ 392
Query: 1461 MSCDPAYLSRAGKERPRFDFDDYDSVPQKFNI 1556
+SCD YLS+AG+ER R+DFDD+D VPQKFN+
Sbjct: 393 ISCDQLYLSKAGRERQRYDFDDFD-VPQKFNV 423
Score = 184 bits (467), Expect = 6e-44
Identities = 90/140 (64%), Positives = 114/140 (81%)
Frame = +2
Query: 194 VESVVAQIQGLSSSAQDIAHLHSLLKQSEDLVHSESTHLAPFLSELDPSIHSLGYLYILE 373
+E++VAQIQGLSSS D+ LH++LKQ++D + SEST LAP L++LDPSIHSLG+LYILE
Sbjct: 4 LEALVAQIQGLSSSPGDLTRLHTVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLYILE 63
Query: 374 ACTSAPSTKDQANELVLSIARFINSCAAEQIRLVPDKFIAVCRRFKDQVILLKAPMRGVA 553
A + P TK QA +V + RFI +C+ EQIRL PDKF++VCRR KDQV+LL+AP+RGVA
Sbjct: 64 ASMTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPDKFLSVCRRLKDQVMLLEAPIRGVA 123
Query: 554 PLLTAIRKLQLSSEHLTTLH 613
PL A+RKLQ S+EHLT LH
Sbjct: 124 PLFNALRKLQASAEHLTPLH 143
>ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1 [Glycine
max]
Length = 423
Score = 365 bits (937), Expect = 2e-98
Identities = 193/272 (70%), Positives = 210/272 (77%)
Frame = +3
Query: 741 IYEVDQPRDLFLYCYYGGMICIGQKRFRKALELLHNVVTAPMSSISAIAVEAYKKYILVS 920
++EVDQPRDLFLYCYYGGMICIGQKRF+KAL+LLHNVVTAPMS+I+AIAVEAYKKYILVS
Sbjct: 167 VFEVDQPRDLFLYCYYGGMICIGQKRFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVS 226
Query: 921 LIHLGQCTTSFPKYTSSVVQRNLKNFTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1100
LI GQ +TS PKY+SS QRNLKNF Q
Sbjct: 227 LIRHGQFSTSLPKYSSSTAQRNLKNFCQPYVELANSYGTGKIAELEAYVKANAEKFESDN 286
Query: 1101 XXXXXXXXXXXXXXXFGLVRQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEM 1280
GLV+QVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEM
Sbjct: 287 N--------------LGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEM 332
Query: 1281 HVLQMIQDGEIYATINQKDGMVRFLEDPEQYKSCEMIERIDSSIQRIMTLSKKLTATDEL 1460
HVLQMIQDGEIYATINQKDGMVRFLEDPEQYK+CEMIE IDSSIQRIM LS+KLTATDE
Sbjct: 333 HVLQMIQDGEIYATINQKDGMVRFLEDPEQYKTCEMIEHIDSSIQRIMALSRKLTATDEQ 392
Query: 1461 MSCDPAYLSRAGKERPRFDFDDYDSVPQKFNI 1556
+SCD YLS+AG+ER R+DFDD+D VPQKFN+
Sbjct: 393 ISCDQLYLSKAGRERQRYDFDDFD-VPQKFNV 423
Score = 183 bits (464), Expect = 1e-43
Identities = 89/140 (63%), Positives = 114/140 (81%)
Frame = +2
Query: 194 VESVVAQIQGLSSSAQDIAHLHSLLKQSEDLVHSESTHLAPFLSELDPSIHSLGYLYILE 373
+E++VAQIQGLSSS D+ LH++LKQ++D + SEST LAP L++LDPSIHSLG+LYILE
Sbjct: 4 LEALVAQIQGLSSSPGDLTRLHTVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLYILE 63
Query: 374 ACTSAPSTKDQANELVLSIARFINSCAAEQIRLVPDKFIAVCRRFKDQVILLKAPMRGVA 553
A + P TK QA +V + RFI +C+ EQIRL PDKF++VC+R KDQV+LL+AP+RGVA
Sbjct: 64 ASMTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPDKFLSVCKRLKDQVMLLEAPIRGVA 123
Query: 554 PLLTAIRKLQLSSEHLTTLH 613
PL A+RKLQ S+EHLT LH
Sbjct: 124 PLFNALRKLQASAEHLTPLH 143