BLASTX nr result

ID: Panax21_contig00004552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004552
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ...   303   1e-80
ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putati...   301   5e-80
gb|AAA76862.1| unknown protein [Solanum chilense]                     291   4e-77
ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit ...   290   9e-77
ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit ...   290   9e-77

>ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera]
           gi|296090247|emb|CBI40066.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score =  303 bits (776), Expect = 1e-80
 Identities = 154/174 (88%), Positives = 163/174 (93%)
 Frame = +2

Query: 2   VEAYKKYILVSLIHVGQFTTSFPKYTSSVAQRNLKNFTQPYLDLANSYSTGKILELETCI 181
           VEAYKKYILVSLIH GQF+T+FPKYTSSVAQRNLKNF+QPYLDLANSYS+GKI E E CI
Sbjct: 216 VEAYKKYILVSLIHNGQFSTTFPKYTSSVAQRNLKNFSQPYLDLANSYSSGKISEPEKCI 275

Query: 182 QAHREKFQMDNNLGLVRQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVL 361
           Q +REKF+ D NLGLV+QVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNS KEAEMHVL
Sbjct: 276 QTNREKFEADKNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVL 335

Query: 362 QMIQDGEIYATINQKDGMVRFLEDPEQYKSCEMIERIDSSIQRIMTLSKKLTVM 523
           QMIQDGEI+ATINQKDGMVRF EDPEQYK+CEMIE IDSSIQRIMTLSKKLT M
Sbjct: 336 QMIQDGEIFATINQKDGMVRFQEDPEQYKTCEMIEHIDSSIQRIMTLSKKLTTM 389


>ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
           gi|223549455|gb|EEF50943.1| 26S proteasome regulatory
           subunit S3, putative [Ricinus communis]
          Length = 427

 Score =  301 bits (770), Expect = 5e-80
 Identities = 152/174 (87%), Positives = 160/174 (91%)
 Frame = +2

Query: 2   VEAYKKYILVSLIHVGQFTTSFPKYTSSVAQRNLKNFTQPYLDLANSYSTGKILELETCI 181
           VEAYKKYIL SLIH GQF+TS PKY SS AQRNLKNF QPY++LANSYSTGKI ELET +
Sbjct: 219 VEAYKKYILASLIHQGQFSTSLPKYASSAAQRNLKNFCQPYIELANSYSTGKIAELETYV 278

Query: 182 QAHREKFQMDNNLGLVRQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVL 361
           Q +REKF+ DNNLGLV+QVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNS KEAEMHVL
Sbjct: 279 QTNREKFESDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVL 338

Query: 362 QMIQDGEIYATINQKDGMVRFLEDPEQYKSCEMIERIDSSIQRIMTLSKKLTVM 523
           QMIQDGEIYATINQKDGMVRFLEDPEQYK+CEMIE IDSSIQRIM LSKKLT M
Sbjct: 339 QMIQDGEIYATINQKDGMVRFLEDPEQYKTCEMIEHIDSSIQRIMNLSKKLTAM 392


>gb|AAA76862.1| unknown protein [Solanum chilense]
          Length = 250

 Score =  291 bits (745), Expect = 4e-77
 Identities = 145/174 (83%), Positives = 161/174 (92%)
 Frame = +2

Query: 2   VEAYKKYILVSLIHVGQFTTSFPKYTSSVAQRNLKNFTQPYLDLANSYSTGKILELETCI 181
           VEAYKKYILVSLIH+GQF+TSFPKYTSSVAQRNLKNF+QPYL+L+NSY TG+I ELET +
Sbjct: 32  VEAYKKYILVSLIHLGQFSTSFPKYTSSVAQRNLKNFSQPYLELSNSYGTGRISELETFV 91

Query: 182 QAHREKFQMDNNLGLVRQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVL 361
           Q ++EKF+ DNNLGLV QVVSSMYKRNIQRLTQTYLTLSLQDIANTVQL   K+AEMHVL
Sbjct: 92  QTNKEKFESDNNLGLVMQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLRGPKQAEMHVL 151

Query: 362 QMIQDGEIYATINQKDGMVRFLEDPEQYKSCEMIERIDSSIQRIMTLSKKLTVM 523
           QMI+DGEIYATINQKDGMVRFLEDPEQYK+C MIE IDSSI+R+M +SKKLT M
Sbjct: 152 QMIEDGEIYATINQKDGMVRFLEDPEQYKTCGMIEHIDSSIKRLMAVSKKLTSM 205


>ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2
           [Glycine max]
          Length = 423

 Score =  290 bits (742), Expect = 9e-77
 Identities = 147/172 (85%), Positives = 158/172 (91%)
 Frame = +2

Query: 2   VEAYKKYILVSLIHVGQFTTSFPKYTSSVAQRNLKNFTQPYLDLANSYSTGKILELETCI 181
           VEAYKKYILVSLI  GQF+TS PKY+SS AQRNLKNF QPY++LANSY TGKI ELE  +
Sbjct: 216 VEAYKKYILVSLIRHGQFSTSLPKYSSSTAQRNLKNFCQPYVELANSYGTGKIAELEAYV 275

Query: 182 QAHREKFQMDNNLGLVRQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVL 361
           +A+ EKF+ DNNLGLV+QVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNS KEAEMHVL
Sbjct: 276 KANAEKFESDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVL 335

Query: 362 QMIQDGEIYATINQKDGMVRFLEDPEQYKSCEMIERIDSSIQRIMTLSKKLT 517
           QMIQDGEIYATINQKDGMVRFLEDPEQYK+CEMIE IDSSIQRIM LS+KLT
Sbjct: 336 QMIQDGEIYATINQKDGMVRFLEDPEQYKTCEMIEHIDSSIQRIMALSRKLT 387


>ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1
           [Glycine max]
          Length = 423

 Score =  290 bits (742), Expect = 9e-77
 Identities = 147/172 (85%), Positives = 158/172 (91%)
 Frame = +2

Query: 2   VEAYKKYILVSLIHVGQFTTSFPKYTSSVAQRNLKNFTQPYLDLANSYSTGKILELETCI 181
           VEAYKKYILVSLI  GQF+TS PKY+SS AQRNLKNF QPY++LANSY TGKI ELE  +
Sbjct: 216 VEAYKKYILVSLIRHGQFSTSLPKYSSSTAQRNLKNFCQPYVELANSYGTGKIAELEAYV 275

Query: 182 QAHREKFQMDNNLGLVRQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSSKEAEMHVL 361
           +A+ EKF+ DNNLGLV+QVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNS KEAEMHVL
Sbjct: 276 KANAEKFESDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVL 335

Query: 362 QMIQDGEIYATINQKDGMVRFLEDPEQYKSCEMIERIDSSIQRIMTLSKKLT 517
           QMIQDGEIYATINQKDGMVRFLEDPEQYK+CEMIE IDSSIQRIM LS+KLT
Sbjct: 336 QMIQDGEIYATINQKDGMVRFLEDPEQYKTCEMIEHIDSSIQRIMALSRKLT 387


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