BLASTX nr result

ID: Panax21_contig00004542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004542
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521472.1| conserved hypothetical protein [Ricinus comm...    73   7e-20
ref|XP_002273410.1| PREDICTED: altered inheritance of mitochondr...    68   2e-19
emb|CBI34859.3| unnamed protein product [Vitis vinifera]               68   2e-19
ref|XP_004141111.1| PREDICTED: altered inheritance of mitochondr...    68   1e-18
ref|XP_002298545.1| predicted protein [Populus trichocarpa] gi|2...    70   5e-18

>ref|XP_002521472.1| conserved hypothetical protein [Ricinus communis]
           gi|223539371|gb|EEF40962.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 361

 Score = 73.2 bits (178), Expect(2) = 7e-20
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = -1

Query: 303 DQVFVSACSHVGGHKYAGNLIIFSPDSDGKVTGHW 199
           DQ+FVSACSHVGGHKYAGNLII+SPDS+GK  GHW
Sbjct: 180 DQIFVSACSHVGGHKYAGNLIIYSPDSEGKTMGHW 214



 Score = 49.7 bits (117), Expect(2) = 7e-20
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = -2

Query: 83  YGYVAPADVYELLDQHIGKGEIIERIW 3
           YGYV P DV E+LDQHIGKG +IERIW
Sbjct: 215 YGYVTPDDVPEILDQHIGKGVVIERIW 241


>ref|XP_002273410.1| PREDICTED: altered inheritance of mitochondria protein 32 [Vitis
           vinifera]
          Length = 399

 Score = 67.8 bits (164), Expect(2) = 2e-19
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = -1

Query: 303 DQVFVSACSHVGGHKYAGNLIIFSPDSDGKVTGHW 199
           DQVFV+ CSHVGGHKYAGNLII+SP+ +GK+ GHW
Sbjct: 223 DQVFVTPCSHVGGHKYAGNLIIYSPNPEGKIMGHW 257



 Score = 53.5 bits (127), Expect(2) = 2e-19
 Identities = 24/27 (88%), Positives = 24/27 (88%)
 Frame = -2

Query: 83  YGYVAPADVYELLDQHIGKGEIIERIW 3
           YGYV P DV ELLDQHIGKGEIIERIW
Sbjct: 258 YGYVTPNDVPELLDQHIGKGEIIERIW 284


>emb|CBI34859.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score = 67.8 bits (164), Expect(2) = 2e-19
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = -1

Query: 303 DQVFVSACSHVGGHKYAGNLIIFSPDSDGKVTGHW 199
           DQVFV+ CSHVGGHKYAGNLII+SP+ +GK+ GHW
Sbjct: 154 DQVFVTPCSHVGGHKYAGNLIIYSPNPEGKIMGHW 188



 Score = 53.5 bits (127), Expect(2) = 2e-19
 Identities = 24/27 (88%), Positives = 24/27 (88%)
 Frame = -2

Query: 83  YGYVAPADVYELLDQHIGKGEIIERIW 3
           YGYV P DV ELLDQHIGKGEIIERIW
Sbjct: 189 YGYVTPNDVPELLDQHIGKGEIIERIW 215


>ref|XP_004141111.1| PREDICTED: altered inheritance of mitochondria protein 32-like
           [Cucumis sativus] gi|449489582|ref|XP_004158355.1|
           PREDICTED: altered inheritance of mitochondria protein
           32-like [Cucumis sativus]
          Length = 353

 Score = 67.8 bits (164), Expect(2) = 1e-18
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = -1

Query: 303 DQVFVSACSHVGGHKYAGNLIIFSPDSDGKVTGHW 199
           DQ +V  CSH+GGHKYAGNLII+SPDSDG++ GHW
Sbjct: 259 DQTYVYPCSHIGGHKYAGNLIIYSPDSDGRIMGHW 293



 Score = 50.8 bits (120), Expect(2) = 1e-18
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = -2

Query: 83  YGYVAPADVYELLDQHIGKGEIIERIW 3
           YGYV P DV ELLD+HIGKGEI+ER+W
Sbjct: 294 YGYVTPDDVPELLDKHIGKGEIVERLW 320


>ref|XP_002298545.1| predicted protein [Populus trichocarpa] gi|222845803|gb|EEE83350.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score = 70.1 bits (170), Expect(2) = 5e-18
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = -1

Query: 303 DQVFVSACSHVGGHKYAGNLIIFSPDSDGKVTGHW 199
           D+VFVSACSHVGGHKYAGNLII+SP+S+GK  GHW
Sbjct: 175 DKVFVSACSHVGGHKYAGNLIIYSPNSEGKTMGHW 209



 Score = 46.6 bits (109), Expect(2) = 5e-18
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = -2

Query: 83  YGYVAPADVYELLDQHIGKGEIIERIW 3
           YGYV P DV E+LDQHI KG +IERIW
Sbjct: 210 YGYVTPEDVPEILDQHIEKGIVIERIW 236


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