BLASTX nr result

ID: Panax21_contig00004528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004528
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259...    86   2e-15
ref|XP_002524096.1| conserved hypothetical protein [Ricinus comm...    80   1e-13
ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259819 [Vitis vinifera]
          Length = 151

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/107 (44%), Positives = 60/107 (56%)
 Frame = -1

Query: 346 MTRQSVLHSSPVDHRQPLLGNHDSSSRGGKHFAXXXXXXXXXXXXXXXXXXXXXTDLLFL 167
           MTRQ V+    ++ RQPLL +  SS  G   FA                      +LL L
Sbjct: 1   MTRQIVMRPPSLNRRQPLLASQSSS--GSIRFAEVAGETTAECAAVACCCPCGLVNLLVL 58

Query: 166 AVYKVPVGLCRKALRSKRRCRLMEKGLLLRAQSRCKCECDDTEMQIH 26
           AVYKVP GLCR+AL+ KR  R+++KGLL   + RC C CDDTE+QIH
Sbjct: 59  AVYKVPAGLCRRALKKKRLRRMIKKGLLQPRRRRCPCGCDDTELQIH 105


>ref|XP_002524096.1| conserved hypothetical protein [Ricinus communis]
           gi|223536664|gb|EEF38306.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 50/127 (39%), Positives = 67/127 (52%), Gaps = 16/127 (12%)
 Frame = -1

Query: 349 FMTRQSVLH---------SSPVDHRQPLLGNH-------DSSSRGGKHFAXXXXXXXXXX 218
           F++RQ  +H         S  +  R+ LL  H       +SS R G HFA          
Sbjct: 57  FISRQIFIHPPSPSPSSSSLSLKKRRSLLRKHAHSSASTNSSIRSG-HFAEFAGGTTAEC 115

Query: 217 XXXXXXXXXXXTDLLFLAVYKVPVGLCRKALRSKRRCRLMEKGLLLRAQSRCKCECDDTE 38
                       +LL+LA+YKVP GLCR+ALR KRR +LM++GLL     RC+C CD+TE
Sbjct: 116 AAICCCCPCGLVNLLYLAIYKVPAGLCRRALRRKRRKQLMKEGLLPARTKRCRCGCDETE 175

Query: 37  MQIHTEV 17
           +QIH E+
Sbjct: 176 IQIHPEM 182


>ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|222855240|gb|EEE92787.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/110 (38%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
 Frame = -1

Query: 349 FMTRQSVLHSSPVDHRQPLLG--NHDSSSRGGKHFAXXXXXXXXXXXXXXXXXXXXXTDL 176
           F + QS++ S      +PLLG  N  SSS                             +L
Sbjct: 19  FPSSQSLIRS------RPLLGHANSSSSSSCSGRLGELAGGTTAECAAICCCCPCGLVNL 72

Query: 175 LFLAVYKVPVGLCRKALRSKRRCRLMEKGLLLRAQSRCKCECDDTEMQIH 26
           L L +YKVPVG+CR+ALR KRR +L++KGLL      C C+ D TE+QIH
Sbjct: 73  LVLTMYKVPVGICRRALRRKRRKKLIKKGLLPPRTRSCSCDYDGTELQIH 122


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