BLASTX nr result

ID: Panax21_contig00004517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004517
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine ...   280   3e-73
ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vi...   278   1e-72
emb|CBI15506.3| unnamed protein product [Vitis vinifera]              278   1e-72
ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula] gi|...   275   9e-72
ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus ...   275   2e-71

>ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 757

 Score =  280 bits (717), Expect = 3e-73
 Identities = 139/160 (86%), Positives = 145/160 (90%), Gaps = 1/160 (0%)
 Frame = +3

Query: 477 MGSAGFNNQNNGQ-RLGITEPISLGGPTEYDVIKTRELEKFLADAGLYESQEEAIGREEV 653
           MG  G +NQNNGQ RLGITEPISL GPTE DVIKTRELEK+L   GLYESQEEA+GREEV
Sbjct: 1   MGIPGLSNQNNGQQRLGITEPISLAGPTEDDVIKTRELEKYLQGVGLYESQEEAVGREEV 60

Query: 654 LGRLDQIVKIWVKSISRGKGLNEQLVQEANAKIFTSGSYRLGVHGPGADIDTLCVGPRHA 833
           LGRLDQIVKIWVK+ISR KG NEQLV EANAKIFT GSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 61  LGRLDQIVKIWVKNISRAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 120

Query: 834 GRDEDFFGELQKMLSEMPEVTELHPIPDAHVPVLKFKFNG 953
            RDEDFFGELQKMLSEM EVTELHP+PDAHVPV+KFKFNG
Sbjct: 121 SRDEDFFGELQKMLSEMQEVTELHPVPDAHVPVMKFKFNG 160


>ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 757

 Score =  278 bits (712), Expect = 1e-72
 Identities = 137/160 (85%), Positives = 147/160 (91%), Gaps = 1/160 (0%)
 Frame = +3

Query: 477 MGSAGFNNQNN-GQRLGITEPISLGGPTEYDVIKTRELEKFLADAGLYESQEEAIGREEV 653
           M + G NN+NN GQRLGITEPISLGGP E DV KT+ELEKFLA AGLYESQEEA+ REEV
Sbjct: 1   MSNLGLNNRNNSGQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEV 60

Query: 654 LGRLDQIVKIWVKSISRGKGLNEQLVQEANAKIFTSGSYRLGVHGPGADIDTLCVGPRHA 833
           LGRLDQIVKIWVK+ISR KGLNEQLVQEANAKIFT GSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 61  LGRLDQIVKIWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 120

Query: 834 GRDEDFFGELQKMLSEMPEVTELHPIPDAHVPVLKFKFNG 953
            R+EDFFGEL KMLSEMPEVTELHP+PDAHVPV++FKF+G
Sbjct: 121 TREEDFFGELHKMLSEMPEVTELHPVPDAHVPVMRFKFSG 160


>emb|CBI15506.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  278 bits (712), Expect = 1e-72
 Identities = 137/160 (85%), Positives = 147/160 (91%), Gaps = 1/160 (0%)
 Frame = +3

Query: 477 MGSAGFNNQNN-GQRLGITEPISLGGPTEYDVIKTRELEKFLADAGLYESQEEAIGREEV 653
           M + G NN+NN GQRLGITEPISLGGP E DV KT+ELEKFLA AGLYESQEEA+ REEV
Sbjct: 1   MSNLGLNNRNNSGQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEV 60

Query: 654 LGRLDQIVKIWVKSISRGKGLNEQLVQEANAKIFTSGSYRLGVHGPGADIDTLCVGPRHA 833
           LGRLDQIVKIWVK+ISR KGLNEQLVQEANAKIFT GSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 61  LGRLDQIVKIWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 120

Query: 834 GRDEDFFGELQKMLSEMPEVTELHPIPDAHVPVLKFKFNG 953
            R+EDFFGEL KMLSEMPEVTELHP+PDAHVPV++FKF+G
Sbjct: 121 TREEDFFGELHKMLSEMPEVTELHPVPDAHVPVMRFKFSG 160


>ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
           gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago
           truncatula]
          Length = 752

 Score =  275 bits (704), Expect = 9e-72
 Identities = 136/160 (85%), Positives = 145/160 (90%), Gaps = 1/160 (0%)
 Frame = +3

Query: 477 MGSAGFNNQNNGQR-LGITEPISLGGPTEYDVIKTRELEKFLADAGLYESQEEAIGREEV 653
           MG  G NNQ+NG++ LGITEPISL GPTE DV KT ELEK+L  AGLYESQ+EA+GREEV
Sbjct: 1   MGIPGMNNQSNGKQWLGITEPISLAGPTEEDVTKTHELEKYLQGAGLYESQQEAVGREEV 60

Query: 654 LGRLDQIVKIWVKSISRGKGLNEQLVQEANAKIFTSGSYRLGVHGPGADIDTLCVGPRHA 833
           LGRLDQIVKIWVK+ISR KG NEQLVQEANAKIFT GSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 61  LGRLDQIVKIWVKTISRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 120

Query: 834 GRDEDFFGELQKMLSEMPEVTELHPIPDAHVPVLKFKFNG 953
            RDEDFFGELQKMLSEM EVTELHP+PDAHVPV+KFKFNG
Sbjct: 121 TRDEDFFGELQKMLSEMEEVTELHPVPDAHVPVMKFKFNG 160


>ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
           gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha,
           putative [Ricinus communis]
          Length = 770

 Score =  275 bits (702), Expect = 2e-71
 Identities = 135/162 (83%), Positives = 146/162 (90%), Gaps = 3/162 (1%)
 Frame = +3

Query: 477 MGSAGFNNQNNGQ---RLGITEPISLGGPTEYDVIKTRELEKFLADAGLYESQEEAIGRE 647
           MGS G + +NNGQ   RLGIT+PISLGGPTEYD+IK+RELEKFL D GLYES+EE++ RE
Sbjct: 1   MGSPGLSTRNNGQQQLRLGITDPISLGGPTEYDLIKSRELEKFLQDMGLYESREESVSRE 60

Query: 648 EVLGRLDQIVKIWVKSISRGKGLNEQLVQEANAKIFTSGSYRLGVHGPGADIDTLCVGPR 827
           EVLGRLDQIVK WVK ISR KGLNEQLVQEANAKIFT GSYRLGVHGPGADIDTLCVGPR
Sbjct: 61  EVLGRLDQIVKHWVKVISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPR 120

Query: 828 HAGRDEDFFGELQKMLSEMPEVTELHPIPDAHVPVLKFKFNG 953
           HA R+EDFFGEL +MLSEMPEVTELHP+PDAHVPVLKFKF G
Sbjct: 121 HATREEDFFGELHRMLSEMPEVTELHPVPDAHVPVLKFKFKG 162


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