BLASTX nr result

ID: Panax21_contig00004513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004513
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601998.1| hypothetical protein MTR_3g087690 [Medicago ...   105   9e-21
ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...    98   2e-18
ref|XP_002263486.2| PREDICTED: uncharacterized protein LOC100249...    87   5e-15
emb|CAN68216.1| hypothetical protein VITISV_008346 [Vitis vinifera]    87   5e-15
ref|NP_001053826.1| Os04g0610000 [Oryza sativa Japonica Group] g...    86   1e-14

>ref|XP_003601998.1| hypothetical protein MTR_3g087690 [Medicago truncatula]
           gi|355491046|gb|AES72249.1| hypothetical protein
           MTR_3g087690 [Medicago truncatula]
          Length = 495

 Score =  105 bits (263), Expect = 9e-21
 Identities = 63/192 (32%), Positives = 95/192 (49%), Gaps = 5/192 (2%)
 Frame = +3

Query: 264 EEESIHENAEGS*PKRKRGPTMGANLWSNIDALKKVIYDANGQPVGGEANKLTTFLGCLG 443
           EEE I E      PKR+RGPT   ++W   D    V  D  G+P+G E    T +LG + 
Sbjct: 68  EEERIVEG-----PKRRRGPTRMLDIWEMEDDFIIVKLDNFGRPIGDEGTAFTRYLGSI- 121

Query: 444 CLARNGEFFSISTPTWSNMTEANMTRAWDAIQKRFTTDHP---NAKRKLMAIMNNRWRDW 614
              R  ++  I+  TW +M   N       I+KRF    P     +  + + +N +WR W
Sbjct: 122 --VRRSQYAPINIKTWKDMPSDNKKAMLKQIEKRFEFVPPITDELREMIKSDLNEKWRQW 179

Query: 615 KSNLKSNNFVPGDRAKSIANTIN--NDRVNPNQWAALVDYWLTDDAQDIATKNCENRKKL 788
           K +LK+  F P      I + I   + R++  Q+  LV+YW +D+A+  +  N +NR K 
Sbjct: 180 KGDLKATGFDPSKTVDEIVSGIELRDARIDEVQYRGLVEYWFSDEAKKASAINKQNRAKY 239

Query: 789 LVGHTLGTKSIP 824
              H +GTKS+P
Sbjct: 240 QDVHCMGTKSLP 251


>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 54/144 (37%), Positives = 80/144 (55%)
 Frame = +3

Query: 387 GQPVGGEANKLTTFLGCLGCLARNGEFFSISTPTWSNMTEANMTRAWDAIQKRFTTDHPN 566
           GQPVG EA+KL+TFLG +   ARNGE   ++   W  M +      W  +Q +F  + P 
Sbjct: 18  GQPVGPEASKLSTFLGTV---ARNGEMAPLTFVDWFAMPDEKKENMWQFVQTKFDIE-PV 73

Query: 567 AKRKLMAIMNNRWRDWKSNLKSNNFVPGDRAKSIANTINNDRVNPNQWAALVDYWLTDDA 746
            K  ++  + ++WR+WK+ LKS ++ P    +   N   + RV P QWA L+ YW +++A
Sbjct: 74  CKTWVLRSLASKWRNWKAKLKSEHYYPHKTDEERLND-RDRRVLPEQWAILISYWNSEEA 132

Query: 747 QDIATKNCENRKKLLVGHTLGTKS 818
           Q  + KN  NR      HT G+KS
Sbjct: 133 QLRSAKNKANRSNQKSTHTAGSKS 156


>ref|XP_002263486.2| PREDICTED: uncharacterized protein LOC100249234 [Vitis vinifera]
          Length = 675

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
 Frame = +3

Query: 309 RKRGPTMGANLWSNIDALKKVIYDAN--GQPVGGEANKLTTFLGCLGCLARNGEFFSIST 482
           R RGPT+  ++W N+   + V+ + N  GQP G  A KL  FLG +   AR+G    ++ 
Sbjct: 361 RVRGPTLCLDVW-NMPEGQHVVVETNEVGQPDGDSACKLGNFLGTI---ARDGHLAPLTY 416

Query: 483 PTWSNMTEANMTRAWDAIQKRFTTDHPNAKRKLMAIMNNRWRDWKSNLKSNNFVPGDRAK 662
             W  + +A         + +F    P  +  ++  +  RW+DWK+ LK+  F   ++  
Sbjct: 417 ADWRAVPQAAKDNMLQLAKSKFEIS-PRVENWVLKTLGKRWKDWKAQLKAKYF--NNKTD 473

Query: 663 SIANTINNDRVNPNQWAALVDYWLTDDAQDIATKNCENRKKLLVGHTLGTKS 818
                I+++RV P Q   L+ YW ++++Q  +  N  NR K  +GHT GTKS
Sbjct: 474 DEHIEIDDERVLPEQRPILLAYWRSEESQKRSAMNKANRAKQSIGHTAGTKS 525


>emb|CAN68216.1| hypothetical protein VITISV_008346 [Vitis vinifera]
          Length = 1253

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
 Frame = +3

Query: 309 RKRGPTMGANLWSNIDALKKVIYDAN--GQPVGGEANKLTTFLGCLGCLARNGEFFSIST 482
           R RGPT+  ++W N+   + V+ + N  GQP G  A KL  FLG +   AR+G    ++ 
Sbjct: 337 RVRGPTLCLDVW-NMPEGQHVVVETNEVGQPDGDSACKLGNFLGTI---ARDGNLAPLTY 392

Query: 483 PTWSNMTEANMTRAWDAIQKRFTTDHPNAKRKLMAIMNNRWRDWKSNLKSNNFVPGDRAK 662
             W  + +A         + +F    P  +  ++  +  RW+DWK+ LK+  F   ++  
Sbjct: 393 XDWRAVPQAAKDNMLQLAKSKFEIS-PRVENWVLKTLGKRWKDWKAQLKAKYF--NNKTD 449

Query: 663 SIANTINNDRVNPNQWAALVDYWLTDDAQDIATKNCENRKKLLVGHTLGTKS 818
                I+++RV P Q   L+ YW ++++Q  +  N  NR K  +GHT GTKS
Sbjct: 450 DEHIEIDDERVLPEQRPILLAYWRSEESQKRSAMNKANRAKQSIGHTAGTKS 501


>ref|NP_001053826.1| Os04g0610000 [Oryza sativa Japonica Group]
           gi|113565397|dbj|BAF15740.1| Os04g0610000, partial
           [Oryza sativa Japonica Group]
          Length = 767

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
 Frame = +3

Query: 309 RKRGPTMGANLWSNIDALK-KVIYDANGQPVGGEANKLTTFLGCLGCLARNGEFFSISTP 485
           R RG T+   +W+    ++  V+ +A+G+PVG EA  L+TFLG L   AR+G    ++  
Sbjct: 414 RGRGLTLCLKVWNLPKGVRIPVLLNASGEPVGKEAGTLSTFLGAL---ARDGILAPLTHQ 470

Query: 486 TWSNMTEANMTRAWDAIQKRFTTDHPNAKRKLMAIMNNRWRDWKSNLKSNNFVPGDRAKS 665
            W  + E N    +  ++ +F    P A+  +M  +  +W+ WK+ LK  ++   D  ++
Sbjct: 471 DWRRVPEKNKDVMYHIVKLKFDIA-PAAEFWIMKCIGRKWKSWKALLKQKHY---DTHET 526

Query: 666 IANTI--NNDRVNPNQWAALVDYWLTDDAQDIATKNCENRKKLLVGHTLGTKS 818
           +   +   N RV   QW  LV YW T+ A+ ++++N   R  +   HT GTKS
Sbjct: 527 VEECLADQNPRVLKEQWQYLVAYWGTEKAKAVSSRNKACRANVTATHTAGTKS 579


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