BLASTX nr result
ID: Panax21_contig00004502
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00004502 (766 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001048592.1| Os02g0827300 [Oryza sativa Japonica Group] g... 58 2e-06 ref|XP_003573003.1| PREDICTED: splicing factor 3B subunit 2-like... 58 2e-06 dbj|BAJ93118.1| predicted protein [Hordeum vulgare subsp. vulgare] 58 2e-06 dbj|BAJ91146.1| predicted protein [Hordeum vulgare subsp. vulgare] 58 2e-06 ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinu... 58 2e-06 >ref|NP_001048592.1| Os02g0827300 [Oryza sativa Japonica Group] gi|48716448|dbj|BAD23055.1| putative splicing factor 3B subunit 2 [Oryza sativa Japonica Group] gi|113538123|dbj|BAF10506.1| Os02g0827300 [Oryza sativa Japonica Group] gi|125584232|gb|EAZ25163.1| hypothetical protein OsJ_08964 [Oryza sativa Japonica Group] Length = 582 Score = 58.2 bits (139), Expect = 2e-06 Identities = 25/29 (86%), Positives = 27/29 (93%) Frame = +1 Query: 295 VLHDAFFKYQTKPKLISHGDLYNDGKEYE 381 VLHDAFFKYQTKPKL SHGDLY +GKE+E Sbjct: 270 VLHDAFFKYQTKPKLTSHGDLYYEGKEFE 298 >ref|XP_003573003.1| PREDICTED: splicing factor 3B subunit 2-like, partial [Brachypodium distachyon] Length = 576 Score = 58.2 bits (139), Expect = 2e-06 Identities = 25/29 (86%), Positives = 27/29 (93%) Frame = +1 Query: 295 VLHDAFFKYQTKPKLISHGDLYNDGKEYE 381 VLHDAFFKYQTKPKL SHGDLY +GKE+E Sbjct: 264 VLHDAFFKYQTKPKLTSHGDLYYEGKEFE 292 >dbj|BAJ93118.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 435 Score = 58.2 bits (139), Expect = 2e-06 Identities = 25/29 (86%), Positives = 27/29 (93%) Frame = +1 Query: 295 VLHDAFFKYQTKPKLISHGDLYNDGKEYE 381 VLHDAFFKYQTKPKL SHGDLY +GKE+E Sbjct: 122 VLHDAFFKYQTKPKLTSHGDLYYEGKEFE 150 >dbj|BAJ91146.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 581 Score = 58.2 bits (139), Expect = 2e-06 Identities = 25/29 (86%), Positives = 27/29 (93%) Frame = +1 Query: 295 VLHDAFFKYQTKPKLISHGDLYNDGKEYE 381 VLHDAFFKYQTKPKL SHGDLY +GKE+E Sbjct: 268 VLHDAFFKYQTKPKLTSHGDLYYEGKEFE 296 >ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinus communis] gi|223541688|gb|EEF43236.1| Splicing factor 3B subunit, putative [Ricinus communis] Length = 590 Score = 58.2 bits (139), Expect = 2e-06 Identities = 24/29 (82%), Positives = 28/29 (96%) Frame = +1 Query: 295 VLHDAFFKYQTKPKLISHGDLYNDGKEYE 381 VLHDAFFKYQTKPKL +HGDLY++GKE+E Sbjct: 283 VLHDAFFKYQTKPKLTTHGDLYHEGKEFE 311