BLASTX nr result

ID: Panax21_contig00004501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004501
         (1251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304003.1| predicted protein [Populus trichocarpa] gi|2...    49   2e-06

>ref|XP_002304003.1| predicted protein [Populus trichocarpa] gi|222841435|gb|EEE78982.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 48.5 bits (114), Expect(2) = 2e-06
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = +3

Query: 837 MDGQILLGRQLTVVFAEENRKKPTDM 914
           MDG++ LGR+LTVVFAEENRKKP DM
Sbjct: 46  MDGRVFLGRELTVVFAEENRKKPVDM 71



 Score = 30.4 bits (67), Expect(2) = 2e-06
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 1012 AMPDHDLIAVTTPPLPREGSTRG-LFHLKRKGIVEKGHTH 1128
            AM    L  V   PL +EG  +  LFH +R G V++GH H
Sbjct: 108  AMQHPGLTVVIIIPLQKEGIPQADLFHPERGGTVKRGHIH 147


Top