BLASTX nr result

ID: Panax21_contig00004500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004500
         (1707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW98429.1| cis-prenyltransferase 5 [Solanum lycopersicum]         184   8e-44
ref|XP_003615624.1| Dehydrodolichyl diphosphate synthase [Medica...   180   9e-43
ref|XP_002313383.1| predicted protein [Populus trichocarpa] gi|2...   178   4e-42
gb|AFW98428.1| cis-prenyltransferase 4 [Solanum lycopersicum]         177   1e-41
ref|XP_002298315.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-41

>gb|AFW98429.1| cis-prenyltransferase 5 [Solanum lycopersicum]
          Length = 313

 Score =  184 bits (466), Expect = 8e-44
 Identities = 86/107 (80%), Positives = 98/107 (91%)
 Frame = -1

Query: 936 VAVSYSGKYDIVQACQSIAQKVQDGLIKPEDINELLLDRELETNCAEFPYPDLLIRTSGE 757
           VA++YSG+YD+VQACQ+IAQ+V+DG I+PEDIN LL+++EL+T C EFP PDLLIRTSGE
Sbjct: 204 VAINYSGQYDVVQACQTIAQRVKDGNIEPEDINSLLVEQELQTKCTEFPSPDLLIRTSGE 263

Query: 756 LRLSNFFLWQLAYTELFFSKSHWPDFGEAEFLEALYSFQQRQRRYGG 616
           LRLSNF LWQLAYTELFFS S WPDFGEAEFLEAL SFQQRQRRYGG
Sbjct: 264 LRLSNFLLWQLAYTELFFSHSQWPDFGEAEFLEALCSFQQRQRRYGG 310



 Score =  136 bits (343), Expect = 1e-29
 Identities = 65/109 (59%), Positives = 78/109 (71%)
 Frame = -2

Query: 1424 DATFVPSEEFSLPAGLRRDLLPSHVAVVMDGNRRWARMRGLPSGSGYEAGIRSLRVLVEL 1245
            D + +  EE  LP  L R+L+P H+AV+MDGNRRWA+ RGLP   GY AGIR LR  V+L
Sbjct: 60   DESSINEEEVPLPTELSRELMPKHIAVIMDGNRRWAKRRGLPVALGYAAGIRVLRNFVKL 119

Query: 1244 CCKWGISVLTVFAFSSDNWFRPKVEVDFLMNLFERGMKTELENFMREDI 1098
               WGIS LT+FAFSS+NWFRPK EVD LM LF++ +K ELEN  R  I
Sbjct: 120  SYNWGISALTLFAFSSENWFRPKAEVDLLMGLFDKVLKDELENLARTGI 168


>ref|XP_003615624.1| Dehydrodolichyl diphosphate synthase [Medicago truncatula]
           gi|355516959|gb|AES98582.1| Dehydrodolichyl diphosphate
           synthase [Medicago truncatula]
          Length = 310

 Score =  180 bits (457), Expect = 9e-43
 Identities = 83/107 (77%), Positives = 97/107 (90%)
 Frame = -1

Query: 936 VAVSYSGKYDIVQACQSIAQKVQDGLIKPEDINELLLDRELETNCAEFPYPDLLIRTSGE 757
           +AVSYSGKYD+VQAC+S+AQKVQDG+I  EDINE ++++ELETNC EFPYPDLLIRTSGE
Sbjct: 202 LAVSYSGKYDLVQACKSVAQKVQDGIIHLEDINENIIEKELETNCTEFPYPDLLIRTSGE 261

Query: 756 LRLSNFFLWQLAYTELFFSKSHWPDFGEAEFLEALYSFQQRQRRYGG 616
           LR+SNF LWQLAYTELFF++  WPDFG+ EF+EAL SFQ RQRRYGG
Sbjct: 262 LRVSNFLLWQLAYTELFFNRKLWPDFGKDEFIEALTSFQNRQRRYGG 308



 Score =  137 bits (344), Expect = 1e-29
 Identities = 64/98 (65%), Positives = 79/98 (80%)
 Frame = -2

Query: 1391 LPAGLRRDLLPSHVAVVMDGNRRWARMRGLPSGSGYEAGIRSLRVLVELCCKWGISVLTV 1212
            LP  L+ DL+P HVAV+MDGN RWA+MRGLP+ +G+ AGI+SLR +V LC  WGI VLTV
Sbjct: 69   LPKELQADLMPKHVAVIMDGNGRWAKMRGLPASAGHVAGIKSLRRMVMLCYSWGIKVLTV 128

Query: 1211 FAFSSDNWFRPKVEVDFLMNLFERGMKTELENFMREDI 1098
            FAFS+DNW RPKVEV+FLM+LFER + +E+E   RE I
Sbjct: 129  FAFSTDNWIRPKVEVEFLMSLFERTINSEIEALEREGI 166


>ref|XP_002313383.1| predicted protein [Populus trichocarpa] gi|222849791|gb|EEE87338.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  178 bits (451), Expect = 4e-42
 Identities = 83/107 (77%), Positives = 99/107 (92%)
 Frame = -1

Query: 936 VAVSYSGKYDIVQACQSIAQKVQDGLIKPEDINELLLDRELETNCAEFPYPDLLIRTSGE 757
           VAVSYSGKYD+ QAC+SIAQKV+DG ++ EDI+E LL++ELETNCAE+P PDLLIRTSGE
Sbjct: 126 VAVSYSGKYDVTQACKSIAQKVKDGTVQLEDIDESLLEQELETNCAEYPCPDLLIRTSGE 185

Query: 756 LRLSNFFLWQLAYTELFFSKSHWPDFGEAEFLEALYSFQQRQRRYGG 616
           LR+SNF LWQLAYTELFF+++ WPDFG+AEF+EAL S+QQRQRRYGG
Sbjct: 186 LRISNFLLWQLAYTELFFAEALWPDFGKAEFVEALTSYQQRQRRYGG 232



 Score =  133 bits (334), Expect = 2e-28
 Identities = 62/88 (70%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
 Frame = -2

Query: 1364 LPSHVAVVMDGNRRWARMRG-LPSGSGYEAGIRSLRVLVELCCKWGISVLTVFAFSSDNW 1188
            +P HVAV+MDGN RWAR RG +   +G+EAG RSLR LVELCC WG+ VLTVFAFS DNW
Sbjct: 1    MPRHVAVIMDGNARWARQRGFIALSAGHEAGARSLRELVELCCDWGVRVLTVFAFSYDNW 60

Query: 1187 FRPKVEVDFLMNLFERGMKTELENFMRE 1104
             RPKVEVDFLM+LFER +K+EL+NF+R+
Sbjct: 61   IRPKVEVDFLMSLFERMLKSELDNFVRQ 88


>gb|AFW98428.1| cis-prenyltransferase 4 [Solanum lycopersicum]
          Length = 308

 Score =  177 bits (448), Expect = 1e-41
 Identities = 82/106 (77%), Positives = 97/106 (91%)
 Frame = -1

Query: 936 VAVSYSGKYDIVQACQSIAQKVQDGLIKPEDINELLLDRELETNCAEFPYPDLLIRTSGE 757
           VAV+YSG++D+VQACQ+IAQKV+D +I+ +DIN  L+++EL+TNC +FP PDLLIRTSGE
Sbjct: 199 VAVNYSGQHDVVQACQTIAQKVKDDIIETKDINSFLIEQELQTNCIDFPCPDLLIRTSGE 258

Query: 756 LRLSNFFLWQLAYTELFFSKSHWPDFGEAEFLEALYSFQQRQRRYG 619
           LRLSNF LWQLAY+ELFFS SHWPDFGEAEFLEAL SFQQRQRRYG
Sbjct: 259 LRLSNFLLWQLAYSELFFSHSHWPDFGEAEFLEALCSFQQRQRRYG 304



 Score =  155 bits (392), Expect = 3e-35
 Identities = 72/103 (69%), Positives = 85/103 (82%)
 Frame = -2

Query: 1406 SEEFSLPAGLRRDLLPSHVAVVMDGNRRWARMRGLPSGSGYEAGIRSLRVLVELCCKWGI 1227
            +EE SLP  LRR+L+P HVA++MDGNRRWA+MRGLP   GYEAGIR++R ++ELC  WGI
Sbjct: 61   AEEVSLPPQLRRELMPKHVALIMDGNRRWAKMRGLPVALGYEAGIRAVRKIIELCGNWGI 120

Query: 1226 SVLTVFAFSSDNWFRPKVEVDFLMNLFERGMKTELENFMREDI 1098
             VLT+FAFSSDNW RPKVEVD LM+LFER +  ELENF RE I
Sbjct: 121  MVLTLFAFSSDNWLRPKVEVDILMSLFERALNDELENFAREGI 163


>ref|XP_002298315.1| predicted protein [Populus trichocarpa] gi|222845573|gb|EEE83120.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  175 bits (444), Expect = 3e-41
 Identities = 80/107 (74%), Positives = 99/107 (92%)
 Frame = -1

Query: 936 VAVSYSGKYDIVQACQSIAQKVQDGLIKPEDINELLLDRELETNCAEFPYPDLLIRTSGE 757
           +AVSYSGKYD+ QAC+SIA KV+DG+++ EDI+E LL++ELETNCA++P PDLLIRTSGE
Sbjct: 135 LAVSYSGKYDVTQACKSIAHKVKDGIVQLEDIDESLLEQELETNCAQYPCPDLLIRTSGE 194

Query: 756 LRLSNFFLWQLAYTELFFSKSHWPDFGEAEFLEALYSFQQRQRRYGG 616
           LR+SNF LWQLAYTELFF+++ WPDFG+AEF+EAL S+QQRQRRYGG
Sbjct: 195 LRISNFLLWQLAYTELFFAEALWPDFGKAEFIEALTSYQQRQRRYGG 241



 Score =  136 bits (343), Expect = 1e-29
 Identities = 65/99 (65%), Positives = 82/99 (82%), Gaps = 1/99 (1%)
 Frame = -2

Query: 1391 LPAGLRRDLLPSHVAVVMDGNRRWARMRGLPSGS-GYEAGIRSLRVLVELCCKWGISVLT 1215
            LP GLRR+++P HVAV+MDGN +WAR RG  + S G+EAG RSLR LV+ CC+WGI VLT
Sbjct: 1    LPEGLRREVMPRHVAVIMDGNAKWARQRGFSAASAGHEAGGRSLRELVKSCCEWGIRVLT 60

Query: 1214 VFAFSSDNWFRPKVEVDFLMNLFERGMKTELENFMREDI 1098
            VFAFS DNW RPK+EV FL++LFER +++EL+NFMR+ I
Sbjct: 61   VFAFSYDNWTRPKMEVVFLLSLFERMLQSELDNFMRKGI 99


Top