BLASTX nr result

ID: Panax21_contig00004480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004480
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281783.1| PREDICTED: vacuole membrane protein 1 [Vitis...    65   4e-08
ref|XP_002314707.1| predicted protein [Populus trichocarpa] gi|2...    63   1e-07
ref|XP_004140147.1| PREDICTED: vacuole membrane protein 1-like [...    62   3e-07
ref|XP_003539287.1| PREDICTED: vacuole membrane protein 1-like [...    61   6e-07
gb|ACU18715.1| unknown [Glycine max]                                   61   6e-07

>ref|XP_002281783.1| PREDICTED: vacuole membrane protein 1 [Vitis vinifera]
           gi|297737027|emb|CBI26228.3| unnamed protein product
           [Vitis vinifera]
          Length = 439

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -2

Query: 232 VQTFFIISVCNNQLLDWVENELIWVLSLIPG 140
           +QT FIISVCNNQLLDW+ENELIWVLSLIPG
Sbjct: 313 IQTVFIISVCNNQLLDWIENELIWVLSLIPG 343


>ref|XP_002314707.1| predicted protein [Populus trichocarpa] gi|222863747|gb|EEF00878.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -2

Query: 232 VQTFFIISVCNNQLLDWVENELIWVLSLIPG 140
           +QT FIISVCNNQLL+W+ENELIWVLSLIPG
Sbjct: 274 IQTIFIISVCNNQLLNWIENELIWVLSLIPG 304


>ref|XP_004140147.1| PREDICTED: vacuole membrane protein 1-like [Cucumis sativus]
           gi|449481070|ref|XP_004156073.1| PREDICTED: vacuole
           membrane protein 1-like [Cucumis sativus]
          Length = 424

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = -2

Query: 232 VQTFFIISVCNNQLLDWVENELIWVLSLIPG 140
           +QT FII+VCNNQLLDW+ENELIW+LS +PG
Sbjct: 304 IQTIFIIAVCNNQLLDWIENELIWILSFVPG 334


>ref|XP_003539287.1| PREDICTED: vacuole membrane protein 1-like [Glycine max]
          Length = 415

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -2

Query: 232 VQTFFIISVCNNQLLDWVENELIWVLSLIPG 140
           +QT FIISVCNNQLLDW+ENE IWVLS IPG
Sbjct: 295 IQTIFIISVCNNQLLDWIENEFIWVLSHIPG 325


>gb|ACU18715.1| unknown [Glycine max]
          Length = 430

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -2

Query: 232 VQTFFIISVCNNQLLDWVENELIWVLSLIPG 140
           +QT FIISVCNNQLLDW+ENE IWVLS IPG
Sbjct: 295 IQTIFIISVCNNQLLDWIENEFIWVLSHIPG 325


Top