BLASTX nr result

ID: Panax21_contig00004468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004468
         (2500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation spec...  1263   0.0  
ref|XP_002517902.1| cleavage and polyadenylation specificity fac...  1220   0.0  
ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation spec...  1218   0.0  
ref|XP_003533995.1| PREDICTED: cleavage and polyadenylation spec...  1201   0.0  
ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation spec...  1197   0.0  

>ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            [Vitis vinifera] gi|302143847|emb|CBI22708.3| unnamed
            protein product [Vitis vinifera]
          Length = 740

 Score = 1263 bits (3267), Expect = 0.0
 Identities = 623/740 (84%), Positives = 679/740 (91%)
 Frame = +2

Query: 155  TSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSRVATSVDAILISH 334
            TSVQVTPLCGVYNENPLSYLVSIDGFNFL+DCGWNDHFDPS LQPL+RVA+++DA+L++H
Sbjct: 3    TSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSFLQPLARVASTIDAVLLAH 62

Query: 335  PDTLHLGALPYAMKQLGLSAPVFATEPVFRLGLLTMYDQYLSRKQVSEFDLFTLDDIDSA 514
            PDTLHLGALPYAMKQLGLSAPV++TEPV+RLGLLTMYDQYLSRKQVS+FDLFTLDDIDSA
Sbjct: 63   PDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSDFDLFTLDDIDSA 122

Query: 515  FQNVTRLTYSQNYHMSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERH 694
            FQNVTRLTYSQNYH+ GKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKER 
Sbjct: 123  FQNVTRLTYSQNYHLFGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKERL 182

Query: 695  LNGTVLESFARPAVLITDAYNALNNQPARRQRDQEFIDAILKSLRADGNVLLPVDTAGRI 874
            LNGTVLESF RPAVLITDAYNALNNQP+RRQRDQEF+D ILK+LR DGNVLLPVDTAGR+
Sbjct: 183  LNGTVLESFVRPAVLITDAYNALNNQPSRRQRDQEFLDVILKTLRGDGNVLLPVDTAGRV 242

Query: 875  LELILILEQYWEQHHLTYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLK 1054
            LEL+LILEQYW QHHL YPIFFLTYV+SSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLK
Sbjct: 243  LELMLILEQYWTQHHLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLK 302

Query: 1055 HVTLLINKSELENVPDGPKVVLASMASLEAGFSHDIFIEWAADMKNLVLFTERGQFATLA 1234
            HVTLLI+KSELE VPDGPK+VLASMASLEAGFSHDIF+EWA D KNLVLF+ERGQFATLA
Sbjct: 303  HVTLLISKSELEKVPDGPKIVLASMASLEAGFSHDIFVEWATDAKNLVLFSERGQFATLA 362

Query: 1235 RMLQSDPPPKAVKVTMSKRVPLVGEELAAYEEEQNRIKKEEALKASMIKEEESKATIGAE 1414
            RMLQ+DPPPKAVKVTMSKRVPLVGEELAAYEEEQ RIKKEEALKAS+ KE+E KA+ G++
Sbjct: 363  RMLQADPPPKAVKVTMSKRVPLVGEELAAYEEEQERIKKEEALKASLSKEDEMKASRGSD 422

Query: 1415 LPTGDAMVIDTSTNQAALDAAVAPCGDAYRGILIDGFVPPSTSVAPMFPFYENSSEWDDF 1594
               GD MVIDT+T  A+ D AV   G  +R ILIDGFVPPSTSVAPMFPFYENSSEWDDF
Sbjct: 423  NKLGDPMVIDTTTPPASSDVAVPHVG-GHRDILIDGFVPPSTSVAPMFPFYENSSEWDDF 481

Query: 1595 GEVINPDDYVVKEDDMDLASVQVGGDLDGKIDEGSASLILDIMPSKVVSSELTVQVKCSL 1774
            GEVINP+DYV+K++DMD A++QVG DL+GK+DEG+ASLI D  PSKV+S+ELTVQVKC L
Sbjct: 482  GEVINPEDYVIKDEDMDQATMQVGDDLNGKLDEGAASLIFDTTPSKVISNELTVQVKCML 541

Query: 1775 IYMDFEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIDETI 1954
            +YMDFEGRSDGRS+KSIL+HVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQI ETI
Sbjct: 542  VYMDFEGRSDGRSIKSILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIGETI 601

Query: 1955 DVTSDLCAYKVQLSEKLMSNVLFKKLGDNEIAWVDAEVGKTESDMXXXXXXXXXXXXHKS 2134
            DVTSDLCAYKVQLSEKLMSNVLFKKLGD E+AWVDAEVGKTES              H +
Sbjct: 602  DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTESGSLSLLPLSTPPPSHDT 661

Query: 2135 VLVGDIKMPDFKQFLESKGVQVEFAGVGAMRCGEHVTLRKVGDASQKGGGAAIQQIVIEG 2314
            V VGDIKM DFKQFL SKG+QVEF+G GA+RCGE+VTLRKVGDASQKGGGA IQQIV+EG
Sbjct: 662  VFVGDIKMADFKQFLASKGIQVEFSG-GALRCGEYVTLRKVGDASQKGGGAIIQQIVMEG 720

Query: 2315 PLSKEYYMIRDYLYSQFYSL 2374
            PL  EYY IR+YLYSQ+Y L
Sbjct: 721  PLCDEYYKIREYLYSQYYLL 740


>ref|XP_002517902.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223542884|gb|EEF44420.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 740

 Score = 1220 bits (3157), Expect = 0.0
 Identities = 609/741 (82%), Positives = 667/741 (90%), Gaps = 1/741 (0%)
 Frame = +2

Query: 155  TSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSRVATSVDAILISH 334
            TSVQVTPL GVYNENPLSYL+SID FN LIDCGWNDHFDPSLLQPLSRVA+++DA+L+SH
Sbjct: 3    TSVQVTPLNGVYNENPLSYLISIDNFNLLIDCGWNDHFDPSLLQPLSRVASTIDAVLLSH 62

Query: 335  PDTLHLGALPYAMKQLGLSAPVFATEPVFRLGLLTMYDQYLSRKQVSEFDLFTLDDIDSA 514
             DTLHLGALPYAMKQLGLSAPV++TEPV+RLGLLTMYDQYLSRK VSEFDLF+LDDIDSA
Sbjct: 63   SDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKAVSEFDLFSLDDIDSA 122

Query: 515  FQNVTRLTYSQNYHMSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERH 694
            FQN+TRLTYSQN+H+SGKGEGIVIAPHVAGHLLGGT+WKITKDGEDV+YAVDFNHRKERH
Sbjct: 123  FQNITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFNHRKERH 182

Query: 695  LNGTVLESFARPAVLITDAYNALNNQPARRQRDQEFID-AILKSLRADGNVLLPVDTAGR 871
            LNGTVLESF RPAVLITDAYNAL+NQP R+QRD+EF++  ILK+L A GNVLLPVDTAGR
Sbjct: 183  LNGTVLESFVRPAVLITDAYNALSNQPPRQQRDKEFLEKTILKTLEAGGNVLLPVDTAGR 242

Query: 872  ILELILILEQYWEQHHLTYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLL 1051
            +LEL+LILEQ+W    L YPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFE +RDNAFLL
Sbjct: 243  VLELLLILEQFWAHRLLNYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFETSRDNAFLL 302

Query: 1052 KHVTLLINKSELENVPDGPKVVLASMASLEAGFSHDIFIEWAADMKNLVLFTERGQFATL 1231
            KHVTLLINK+EL+N P+ PKVVLASMASLEAGFSHDIF+EWAAD+KNLVLFTERGQF TL
Sbjct: 303  KHVTLLINKNELDNAPNVPKVVLASMASLEAGFSHDIFVEWAADVKNLVLFTERGQFGTL 362

Query: 1232 ARMLQSDPPPKAVKVTMSKRVPLVGEELAAYEEEQNRIKKEEALKASMIKEEESKATIGA 1411
            ARMLQ+DPPPKAVKVTMS+RVPLVG+EL AYEEEQ R+KKEE L ASMIKEEE+K + G 
Sbjct: 363  ARMLQADPPPKAVKVTMSRRVPLVGDELIAYEEEQKRLKKEEELNASMIKEEEAKVSHGP 422

Query: 1412 ELPTGDAMVIDTSTNQAALDAAVAPCGDAYRGILIDGFVPPSTSVAPMFPFYENSSEWDD 1591
            +    D M+ID S N A+LD AV   G  YR IL DGFVPPSTSVAPMFPFYEN++EWDD
Sbjct: 423  DSNLSDPMIIDASNNNASLD-AVGSQGTGYRDILFDGFVPPSTSVAPMFPFYENTTEWDD 481

Query: 1592 FGEVINPDDYVVKEDDMDLASVQVGGDLDGKIDEGSASLILDIMPSKVVSSELTVQVKCS 1771
            FGEVINPDDYV+K+DDMD   + VGGD+DGK DEGSAS ILD  PSKVVSSELTVQVKCS
Sbjct: 482  FGEVINPDDYVIKDDDMD-QPMHVGGDIDGKFDEGSASWILDTKPSKVVSSELTVQVKCS 540

Query: 1772 LIYMDFEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIDET 1951
            LIYMD+EGRSDGRS+KSILAHVAPLKLVLVHGSAE+TEHLKQHCLKHVCPHVYAPQI+ET
Sbjct: 541  LIYMDYEGRSDGRSIKSILAHVAPLKLVLVHGSAESTEHLKQHCLKHVCPHVYAPQIEET 600

Query: 1952 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDNEIAWVDAEVGKTESDMXXXXXXXXXXXXHK 2131
            IDVTSDLCAYKVQLSEKLMSNVLFKKLGD EIAWVDAEVGKTESD             HK
Sbjct: 601  IDVTSDLCAYKVQLSEKLMSNVLFKKLGDFEIAWVDAEVGKTESDALSLLPISTSAPPHK 660

Query: 2132 SVLVGDIKMPDFKQFLESKGVQVEFAGVGAMRCGEHVTLRKVGDASQKGGGAAIQQIVIE 2311
            SVLVGD+KM DFKQFL SKGVQVEFAG GA+RCGE+VTLRKVG+ +QKGGG+  QQIVIE
Sbjct: 661  SVLVGDLKMADFKQFLASKGVQVEFAG-GALRCGEYVTLRKVGNINQKGGGSGTQQIVIE 719

Query: 2312 GPLSKEYYMIRDYLYSQFYSL 2374
            GPL ++YY IR+YLYSQFY L
Sbjct: 720  GPLCEDYYKIREYLYSQFYLL 740


>ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Cucumis sativus]
          Length = 738

 Score = 1218 bits (3151), Expect = 0.0
 Identities = 602/740 (81%), Positives = 671/740 (90%)
 Frame = +2

Query: 155  TSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSRVATSVDAILISH 334
            TSVQVTPLCGVYNENPLSYLVS+D FNFLIDCGWNDHFDP+LLQPLSRVA+++DA+LISH
Sbjct: 3    TSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISH 62

Query: 335  PDTLHLGALPYAMKQLGLSAPVFATEPVFRLGLLTMYDQYLSRKQVSEFDLFTLDDIDSA 514
            PDTLHLGALPYAMKQLGLSAPVF+TEPV+RLGLLTMYDQ+++RKQVSEFDLFTLDDIDSA
Sbjct: 63   PDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSA 122

Query: 515  FQNVTRLTYSQNYHMSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERH 694
            FQ VTRLTYSQN+H+SGKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKERH
Sbjct: 123  FQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERH 182

Query: 695  LNGTVLESFARPAVLITDAYNALNNQPARRQRDQEFIDAILKSLRADGNVLLPVDTAGRI 874
            LNGT+LESF RPAVLITDAYNALNNQP RRQ+D+EF D I K+LRA+GNVLLPVDTAGR+
Sbjct: 183  LNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRV 242

Query: 875  LELILILEQYWEQHHLTYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLK 1054
            LELI ILE YWE+  L YPIFFLTYV+SSTIDY+KSFLEWMSD+IAKSFEHTR+NAFLLK
Sbjct: 243  LELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFLLK 302

Query: 1055 HVTLLINKSELENVPDGPKVVLASMASLEAGFSHDIFIEWAADMKNLVLFTERGQFATLA 1234
            HVTLLINKSEL+N PDGPKVVLASMASLEAG+SHDIF++WA D KNLVLF+ERGQF TLA
Sbjct: 303  HVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGTLA 362

Query: 1235 RMLQSDPPPKAVKVTMSKRVPLVGEELAAYEEEQNRIKKEEALKASMIKEEESKATIGAE 1414
            RMLQ+DPPPKAVKVT+SKRVPL G+EL AYEEEQNR KKEEALKAS++KEE+SKA+ GA+
Sbjct: 363  RMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNR-KKEEALKASLLKEEQSKASHGAD 421

Query: 1415 LPTGDAMVIDTSTNQAALDAAVAPCGDAYRGILIDGFVPPSTSVAPMFPFYENSSEWDDF 1594
              TGD M+ID S+N A      +  G AYR ILIDGFVPPST VAPMFPFYEN+S WDDF
Sbjct: 422  NDTGDPMIIDASSNVA--PDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDF 479

Query: 1595 GEVINPDDYVVKEDDMDLASVQVGGDLDGKIDEGSASLILDIMPSKVVSSELTVQVKCSL 1774
            GEVINPDDYV+K++DMD A++  GGD+DGK+DE +A+LILD+ PSKVVS+ELTVQVKCSL
Sbjct: 480  GEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSL 539

Query: 1775 IYMDFEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIDETI 1954
             YMDFEGRSDGRS+KSIL+HVAPLKLVLVHG+AEATEHLKQHCLK+VCPHVYAPQI+ETI
Sbjct: 540  HYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETI 599

Query: 1955 DVTSDLCAYKVQLSEKLMSNVLFKKLGDNEIAWVDAEVGKTESDMXXXXXXXXXXXXHKS 2134
            DVTSDLCAYKVQLSEKLMSNVLFKKLGD EI W+DAEVGKTE+              HKS
Sbjct: 600  DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKS 659

Query: 2135 VLVGDIKMPDFKQFLESKGVQVEFAGVGAMRCGEHVTLRKVGDASQKGGGAAIQQIVIEG 2314
            VLVGD+KM DFKQFL SKG+QVEFAG GA+RCGE+VTLRKV DASQKGGG+  QQ+VIEG
Sbjct: 660  VLVGDLKMADFKQFLASKGIQVEFAG-GALRCGEYVTLRKVTDASQKGGGSGTQQVVIEG 718

Query: 2315 PLSKEYYMIRDYLYSQFYSL 2374
            PL ++YY IR+ LYSQFY L
Sbjct: 719  PLCEDYYKIRELLYSQFYLL 738


>ref|XP_003533995.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform 1 [Glycine max]
          Length = 736

 Score = 1201 bits (3108), Expect = 0.0
 Identities = 598/740 (80%), Positives = 658/740 (88%)
 Frame = +2

Query: 155  TSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSRVATSVDAILISH 334
            TSVQVTPLCGVYNENPLSYLVSIDGFNFL+DCGWNDHFDPS LQPL+RVA+++DA+L+SH
Sbjct: 3    TSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSHLQPLARVASTIDAVLLSH 62

Query: 335  PDTLHLGALPYAMKQLGLSAPVFATEPVFRLGLLTMYDQYLSRKQVSEFDLFTLDDIDSA 514
             DTLHLGALPYAMK+LGLSAPV++TEPV+RLGLLTMYDQYLSRKQVSEFDLFTLDDIDSA
Sbjct: 63   ADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDIDSA 122

Query: 515  FQNVTRLTYSQNYHMSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERH 694
            FQ+VTRLTYSQN+H SGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERH
Sbjct: 123  FQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERH 182

Query: 695  LNGTVLESFARPAVLITDAYNALNNQPARRQRDQEFIDAILKSLRADGNVLLPVDTAGRI 874
            LNGTVL SF RPAVLITDAYNALNNQP RRQ D+EF D + K+LRA GNVLLPVDT GR+
Sbjct: 183  LNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTVGRV 242

Query: 875  LELILILEQYWEQHHLTYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLK 1054
            LELIL+LE YW   +L YPI+FLTYV+SSTIDYVKSFLEWMSD+IAKSFE TR+N FLLK
Sbjct: 243  LELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIFLLK 302

Query: 1055 HVTLLINKSELENVPDGPKVVLASMASLEAGFSHDIFIEWAADMKNLVLFTERGQFATLA 1234
            +VTLLINK+EL+N PDGPKVVLASMASLEAGFSHDIF+EWA D+KNLVLFTERGQFATLA
Sbjct: 303  YVTLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTERGQFATLA 362

Query: 1235 RMLQSDPPPKAVKVTMSKRVPLVGEELAAYEEEQNRIKKEEALKASMIKEEESKATIGAE 1414
            RMLQ+DPPPKAVKV +SKRVPLVGEEL AYEEEQNRIKK EALKAS++KEEE K + GA+
Sbjct: 363  RMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKK-EALKASLMKEEELKTSHGAD 421

Query: 1415 LPTGDAMVIDTSTNQAALDAAVAPCGDAYRGILIDGFVPPSTSVAPMFPFYENSSEWDDF 1594
                D MVID+  N         P G  YR I IDGFVPPSTSVAP+FP YEN+SEWDDF
Sbjct: 422  NDISDPMVIDSGNNH----DVTGPRGGGYRDIFIDGFVPPSTSVAPIFPCYENTSEWDDF 477

Query: 1595 GEVINPDDYVVKEDDMDLASVQVGGDLDGKIDEGSASLILDIMPSKVVSSELTVQVKCSL 1774
            GEVINPDDYV+K++DMD  ++  G D++GK+DEG+ASLILD  PSKVVS E TVQV+CSL
Sbjct: 478  GEVINPDDYVIKDEDMDQTAMHGGSDINGKLDEGAASLILDTKPSKVVSDERTVQVRCSL 537

Query: 1775 IYMDFEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIDETI 1954
            +YMDFEGRSDGRS+K+IL+HVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQI+ETI
Sbjct: 538  VYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEETI 597

Query: 1955 DVTSDLCAYKVQLSEKLMSNVLFKKLGDNEIAWVDAEVGKTESDMXXXXXXXXXXXXHKS 2134
            DVTSDLCAYKVQLSEKLMSNVLFKKLGD EIAWVDA VGKTE+D             HKS
Sbjct: 598  DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAVVGKTENDPLSLLPVSGAAPPHKS 657

Query: 2135 VLVGDIKMPDFKQFLESKGVQVEFAGVGAMRCGEHVTLRKVGDASQKGGGAAIQQIVIEG 2314
            VLVGD+K+ D KQFL SKGVQVEFAG GA+RCGE+VTLRKVGDASQKGGG+  QQIVIEG
Sbjct: 658  VLVGDLKLADIKQFLSSKGVQVEFAG-GALRCGEYVTLRKVGDASQKGGGSGAQQIVIEG 716

Query: 2315 PLSKEYYMIRDYLYSQFYSL 2374
            PL ++YY IRDYLYSQFY L
Sbjct: 717  PLCEDYYKIRDYLYSQFYLL 736


>ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform 1 [Glycine max]
          Length = 738

 Score = 1197 bits (3096), Expect = 0.0
 Identities = 595/740 (80%), Positives = 660/740 (89%)
 Frame = +2

Query: 155  TSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSRVATSVDAILISH 334
            TSVQVTPLCGVYNENPLSYLVSIDGFNFL+DCGWNDHFDPSLLQPL+RVA+++DA+L+SH
Sbjct: 3    TSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSLLQPLARVASTIDAVLLSH 62

Query: 335  PDTLHLGALPYAMKQLGLSAPVFATEPVFRLGLLTMYDQYLSRKQVSEFDLFTLDDIDSA 514
             DTLHLGALPYAMKQLGLSAPV++TEPV+RLGLLTMYDQYLSRKQVSEFDLFTLDDIDS+
Sbjct: 63   ADTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDIDSS 122

Query: 515  FQNVTRLTYSQNYHMSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERH 694
            FQ+VTRLTYSQN+H SGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERH
Sbjct: 123  FQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERH 182

Query: 695  LNGTVLESFARPAVLITDAYNALNNQPARRQRDQEFIDAILKSLRADGNVLLPVDTAGRI 874
            LNGTVL SF RPAVLITDAYNALNNQP RRQ D+EF D + K+LR  GNVLLPVDT GR+
Sbjct: 183  LNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLREGGNVLLPVDTVGRV 242

Query: 875  LELILILEQYWEQHHLTYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLK 1054
            LELIL+LE YW   +L YPI+FLTYV+SSTIDYVKSFLEWMSD+IAKSFE TR+N FLLK
Sbjct: 243  LELILMLESYWTDENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIFLLK 302

Query: 1055 HVTLLINKSELENVPDGPKVVLASMASLEAGFSHDIFIEWAADMKNLVLFTERGQFATLA 1234
            +VTLLINK+EL+N PDGPKVVLASMASLEAGFSH+IF+EWA D+KNLVLFTERGQFATLA
Sbjct: 303  YVTLLINKTELDNAPDGPKVVLASMASLEAGFSHEIFVEWANDVKNLVLFTERGQFATLA 362

Query: 1235 RMLQSDPPPKAVKVTMSKRVPLVGEELAAYEEEQNRIKKEEALKASMIKEEESKATIGAE 1414
            RMLQ+DPPPKAVKV +SKRV LVGEEL AYEEEQNRIKK EALKAS++KEEE K + GA+
Sbjct: 363  RMLQADPPPKAVKVVVSKRVALVGEELIAYEEEQNRIKK-EALKASLMKEEEFKTSHGAD 421

Query: 1415 LPTGDAMVIDTSTNQAALDAAVAPCGDAYRGILIDGFVPPSTSVAPMFPFYENSSEWDDF 1594
              T D+MVID+  N    + +  P G  YR I IDGFVPP TSVAPMFP YEN+SEWDDF
Sbjct: 422  NNTSDSMVIDSGNNHVPPEVS-GPRGGGYRDIFIDGFVPPLTSVAPMFPCYENTSEWDDF 480

Query: 1595 GEVINPDDYVVKEDDMDLASVQVGGDLDGKIDEGSASLILDIMPSKVVSSELTVQVKCSL 1774
            GEVINPDDYV+K++DMD  ++  GGD++GK+DEG+ASLILD  PSKVVS E TVQV+CSL
Sbjct: 481  GEVINPDDYVIKDEDMDQTAMH-GGDINGKLDEGAASLILDTKPSKVVSDERTVQVRCSL 539

Query: 1775 IYMDFEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIDETI 1954
            +YMDFEGRSDGRS+K+IL+HVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQ++ETI
Sbjct: 540  VYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQLEETI 599

Query: 1955 DVTSDLCAYKVQLSEKLMSNVLFKKLGDNEIAWVDAEVGKTESDMXXXXXXXXXXXXHKS 2134
            DVTSDLCAYKV LSEKLMSNVLFKKLGD E+AWVDA VGKTE+D             HKS
Sbjct: 600  DVTSDLCAYKVLLSEKLMSNVLFKKLGDYELAWVDAVVGKTENDPLSLLPVSGAAPPHKS 659

Query: 2135 VLVGDIKMPDFKQFLESKGVQVEFAGVGAMRCGEHVTLRKVGDASQKGGGAAIQQIVIEG 2314
            VLVGD+K+ D KQFL SKGVQVEFAG GA+RCGE+VTLRKVGDASQKGGG+  QQIVIEG
Sbjct: 660  VLVGDLKLADIKQFLSSKGVQVEFAG-GALRCGEYVTLRKVGDASQKGGGSGAQQIVIEG 718

Query: 2315 PLSKEYYMIRDYLYSQFYSL 2374
            PL ++YY IRDYLYSQFY L
Sbjct: 719  PLCEDYYKIRDYLYSQFYLL 738


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