BLASTX nr result

ID: Panax21_contig00004466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004466
         (1635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19167.3| unnamed protein product [Vitis vinifera]              209   2e-51
ref|XP_003634473.1| PREDICTED: uncharacterized protein LOC100855...   135   3e-29
ref|XP_002264947.2| PREDICTED: uncharacterized protein LOC100260...   125   2e-26
emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]   125   2e-26
ref|XP_002306571.1| methyl binding domain protein [Populus trich...   116   2e-23

>emb|CBI19167.3| unnamed protein product [Vitis vinifera]
          Length = 1129

 Score =  209 bits (532), Expect = 2e-51
 Identities = 153/465 (32%), Positives = 231/465 (49%), Gaps = 11/465 (2%)
 Frame = +1

Query: 1    PLSNREGITENYGNEISSSMVEESRQQEVSLSRLFSLSGHEQNCGVEKYVDSLPARKVDS 180
            P   + G   N    +S  +VE ++Q+    S+  +LSG+ Q   V     S  +     
Sbjct: 681  PNEQKCGFVNNMNGVLSPPIVESNQQR---CSKSVTLSGNNQTYDVNNN-GSWVSTGTGR 736

Query: 181  ECKEVEACRNSELIVSFGSS--ELNADVTSTKERSLEF--CSLLPSGTG-TIFDVQDNAT 345
               E +   N+EL   FGS+  + N D  +  E  +    CSL+ S    T F    N T
Sbjct: 737  PRVEADNSGNNELTFGFGSNHPQPNEDAVTCVEWGISSGSCSLVSSWKDQTCFK---NNT 793

Query: 346  RVHNSSAEECRQEHSGSGLLTQSCFVKNASDVYTVNKIYNTPVNELKFDDVQNSGNHDLS 525
               ++  +  +++ S SG LT SC  +        NK     +++LKFD++ NS N +L 
Sbjct: 794  NWVSACTKPLQEKGSESGALTPSCKEQIWGVENNGNKFSIGTMDKLKFDEINNSRNSELI 853

Query: 526  LAFNNPP-AGPYADT-TSFEHEKYPANWSSIPSRIEQNIGVQTNLTMVNNNMVEEXXXXX 699
            +   N    G   D  TS + ++    + SI S+ EQ IG ++ +T   N+ V E     
Sbjct: 854  ITSGNMSNTGVGMDVVTSVQKQRGSEGYLSILSKNEQKIGAESPVTGFCNSAVAELKLGG 913

Query: 700  XXXXXXXXXXXX---WGSENNFNSAYTDRGWEGPEVDEVGNSENKKYMVDFGRNNDQPGE 870
                            G  N+    Y  R WE P + EV N  N + M+ FG ++ QPG+
Sbjct: 914  HSESGFCIQSDGEQKCGIGNDLKRVYPGRFWEVPRLREVENPSNTELMIGFGSSHAQPGQ 973

Query: 871  NVIPGGIWRTDEDDALQNNLADTSNPMAQSPSSFRTFNIVSDKAEDGLFRLNERYDRESC 1050
            +V+   +WR+DE++ LQ+ L ++S+ M  S S F TF+++SDK  +GL   NE+++ +S 
Sbjct: 974  DVMAEVMWRSDEENVLQSALGNSSSSMVLSSSCFPTFDVISDKGLNGLCTANEKFNTDS- 1032

Query: 1051 FEGPRSGRTEPVEFSFLTTQNLTSLQGDSKNFSYDAGMEQELDSSYWLGKHDLMPNMAAR 1230
                     E ++FS LT Q   SL  DSK  SYDAGMEQ  +SS WL K  L+P +A R
Sbjct: 1033 --------IENLKFSSLTAQR-NSLSEDSKVLSYDAGMEQGFNSSEWLEKETLLPKVAGR 1083

Query: 1231 SQVTTLCVWCRNEFHHEPVHSGMQ-AEIGSLCPTCRARISEQVNV 1362
              V  LC+WCRNEFHHE V +  Q    G +CPTC+ +   ++N+
Sbjct: 1084 HLVAALCIWCRNEFHHENVGNATQTGSTGLMCPTCKVKFPGELNL 1128


>ref|XP_003634473.1| PREDICTED: uncharacterized protein LOC100855338 [Vitis vinifera]
          Length = 150

 Score =  135 bits (340), Expect = 3e-29
 Identities = 70/159 (44%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
 Frame = +1

Query: 889  IWRTDEDDALQNNLADTSNPMAQSPSSFRTFNIVSDKAEDGLFRLNERYDRESCFEGPRS 1068
            +WR+DE++ LQ+ L ++S+ M  S S F TF+++SDK  +GL   NE+++ +S       
Sbjct: 1    MWRSDEENVLQSALGNSSSSMVLSSSCFPTFDVISDKGLNGLCTANEKFNTDSI------ 54

Query: 1069 GRTEPVEFSFLTTQNLTSLQGDSKNFSYDAGMEQELDSSYWLGKHDLMPNMAARSQVTTL 1248
               E ++FS LT Q   SL  DSK  SYDAGMEQ  +SS WL K  L+P +A R  V  L
Sbjct: 55   ---ENLKFSSLTAQR-NSLSEDSKVLSYDAGMEQGFNSSEWLEKETLLPKVAGRHLVAAL 110

Query: 1249 CVWCRNEFHHEPVHSGMQ-AEIGSLCPTCRARISEQVNV 1362
            C+WCRNEFHHE V +  Q    G +CPTC+ +   ++N+
Sbjct: 111  CIWCRNEFHHENVGNATQTGSTGLMCPTCKVKFPGELNL 149


>ref|XP_002264947.2| PREDICTED: uncharacterized protein LOC100260704 [Vitis vinifera]
          Length = 403

 Score =  125 bits (315), Expect = 2e-26
 Identities = 78/213 (36%), Positives = 109/213 (51%), Gaps = 1/213 (0%)
 Frame = +1

Query: 745  ENNFNSAYTDRGWEGPEVDEVGNSENKKYMVDFGRNNDQPGENVIPGGIWRTDEDDALQN 924
            ENN N         G E  E           D GR+ND     V    + +T ED+  QN
Sbjct: 190  ENNMNDISEQSKPGGVEEYENSGLTRGYGSSDIGRDND-----VATMTMSQTPEDNVYQN 244

Query: 925  NLADTSNPMAQSPSSFRTFNIVSDKAEDGLFRLNERYDRESCFEGPRSGRTEPVEFSFLT 1104
             ++D+S P+     SF T+N +SDK ED    ++++    + FE  +    E ++F F+T
Sbjct: 245  RVSDSSMPLVHPLHSFPTYNAISDKGEDEFCCVDQKLQNTTGFEELKLDEIESLKFGFVT 304

Query: 1105 TQNLTSLQGDSKNFSYDAGMEQELDSSYWLGKHDLMPNMAARSQVTTLCVWCRNEFHHEP 1284
             Q   SL          A ME   DSS      ++M +M  R Q+TT CVWCR EF HE 
Sbjct: 305  EQGPLSLPEVHMGLENGATMEDGFDSSIGFEPEEVMLSMTGRHQLTTACVWCRVEFSHEA 364

Query: 1285 VHSGMQAE-IGSLCPTCRARISEQVNVL*RGLS 1380
            V S MQ++ +G +CPTC+++IS Q+NVL  GLS
Sbjct: 365  VESEMQSDSVGFMCPTCKSKISGQLNVLDSGLS 397


>emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]
          Length = 849

 Score =  125 bits (315), Expect = 2e-26
 Identities = 78/213 (36%), Positives = 109/213 (51%), Gaps = 1/213 (0%)
 Frame = +1

Query: 745  ENNFNSAYTDRGWEGPEVDEVGNSENKKYMVDFGRNNDQPGENVIPGGIWRTDEDDALQN 924
            ENN N         G E  E           D GR+ND     V    + +T ED+  QN
Sbjct: 636  ENNMNDISEQSKPGGVEEYENSGLTRGYGSSDIGRDND-----VATMTMSQTPEDNVYQN 690

Query: 925  NLADTSNPMAQSPSSFRTFNIVSDKAEDGLFRLNERYDRESCFEGPRSGRTEPVEFSFLT 1104
             ++D+S P+     SF T+N +SDK ED    ++++    + FE  +    E ++F F+T
Sbjct: 691  RVSDSSMPLVHPLHSFPTYNAISDKGEDEFCCVDQKLQNTTGFEELKLDEIESLKFGFVT 750

Query: 1105 TQNLTSLQGDSKNFSYDAGMEQELDSSYWLGKHDLMPNMAARSQVTTLCVWCRNEFHHEP 1284
             Q   SL          A ME   DSS      ++M +M  R Q+TT CVWCR EF HE 
Sbjct: 751  EQGPLSLPEVHMGLENGATMEDGFDSSIGFEPEEVMLSMTGRHQLTTACVWCRVEFSHEA 810

Query: 1285 VHSGMQAE-IGSLCPTCRARISEQVNVL*RGLS 1380
            V S MQ++ +G +CPTC+++IS Q+NVL  GLS
Sbjct: 811  VESEMQSDSVGFMCPTCKSKISGQLNVLDSGLS 843


>ref|XP_002306571.1| methyl binding domain protein [Populus trichocarpa]
            gi|222856020|gb|EEE93567.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 1248

 Score =  116 bits (290), Expect = 2e-23
 Identities = 125/462 (27%), Positives = 192/462 (41%), Gaps = 12/462 (2%)
 Frame = +1

Query: 4    LSNREGITENYGNEISSSMVEESRQQEVSLSRLFSLSGHEQNCGVEKYVDSLPARKVDS- 180
            L+ +  + EN         + E  Q+E S   L ++SG+EQ+  ++  V  +    ++  
Sbjct: 831  LNEQMHLAENNITGTPKCTIREPCQEEESEGGLLTISGNEQSFDLKGNVIKVSKGTINVV 890

Query: 181  ECKEVEACRNSELIVSFGSS--ELNADVTSTKERSLEFCSLLPSGTGTIFDVQDNATRVH 354
               EV   +N+E    FGS   +    VT+ +ERS    S  PS  G  F  +D      
Sbjct: 891  NHNEVLCLKNNE----FGSEIDQSVQTVTNIQERSSNIFSFFPSTNGLTFASKDE----- 941

Query: 355  NSSAEECRQEHSGSGLLTQSCFVKNASDVYTVNKIYNTPVNELKFDDVQNSGNHDLSLAF 534
                    Q H     + Q     +A D               K  + + S N +L +AF
Sbjct: 942  --------QSHDDENSMNQLSCTTSAED---------------KLQEAKTSCNGELCIAF 978

Query: 535  NNPPAGPYADTTSFEHEK----YPANWSSIPSRIEQNIGVQTNLTMVNNNM--VEEXXXX 696
             +      AD  +   ++    +  N  ++ ++          +  +N  M  VE     
Sbjct: 979  GDNCTEQDADIVTGTVQEICFLFAGNQHTLTAKDNATGPFNGTMDELNQKMDSVESVLCL 1038

Query: 697  XXXXXXXXXXXXXWGSENNFNSAYTDRGWEGPEVDEVGNSENKKYMVDFGRNNDQPGENV 876
                            E N ++A+T    E P V    NS+      DF   +  P E+V
Sbjct: 1039 SGDAPMRSV-------EKNLHTAFTGSIQEEPRVKNTENSKKDDLGHDFS-GHPGPNESV 1090

Query: 877  IPGGIWRTDEDDALQNNLADTSNPMAQSPSSFRTFNIVSDKAEDGLFRLNERYDRESCFE 1056
                +WR +E+  L+ + ADT  P+ Q+   F  ++ VSDK E   F   E Y   S FE
Sbjct: 1091 ESEFVWRNEENGGLRCDFADTCQPV-QASGFFPLYDAVSDKGESEHF--GEAYGVISGFE 1147

Query: 1057 GPRSGRTEPVEFSFLTTQNLTSLQGDSKNFSYDAGMEQELDSSYWLGKHDL--MPNMAAR 1230
            G +SG  E +E++ LT+Q ++S   +SK  S DA + Q  DSS  L K DL  +P  A+R
Sbjct: 1148 GLKSGGMENMEYNLLTSQ-VSSHSDESKVVSCDAVIPQGFDSSVCLEKGDLPFLPKNASR 1206

Query: 1231 SQVTTLCVWCRNEFHHEPVHSGMQ-AEIGSLCPTCRARISEQ 1353
              V  +CVWC  E   E   S  Q + +G +C  C AR S Q
Sbjct: 1207 HHVPAVCVWCGREICQEAFESEAQTSTMGFMCAECAARFSGQ 1248


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