BLASTX nr result
ID: Panax21_contig00004448
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00004448 (461 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315781.1| predicted protein [Populus trichocarpa] gi|2... 112 2e-23 ref|XP_002311616.1| predicted protein [Populus trichocarpa] gi|2... 112 4e-23 ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vit... 107 1e-21 ref|XP_004170713.1| PREDICTED: protein TIME FOR COFFEE-like, par... 95 5e-18 ref|XP_004140148.1| PREDICTED: protein TIME FOR COFFEE-like [Cuc... 95 5e-18 >ref|XP_002315781.1| predicted protein [Populus trichocarpa] gi|222864821|gb|EEF01952.1| predicted protein [Populus trichocarpa] Length = 373 Score = 112 bits (281), Expect = 2e-23 Identities = 59/100 (59%), Positives = 67/100 (67%) Frame = +3 Query: 105 GTTVSSSTGMLSLCTPVTLSSTSTTDPXXXXXXXXXXXXXXXSNMKGGGLSSQGTLHAAQ 284 GT+ +SSTGMLSLC PVTL+ TS+TDP +NMKGGGL SQG +HA Sbjct: 284 GTSATSSTGMLSLCPPVTLAFTSSTDPAKAAA----------NNMKGGGLPSQGLIHAQF 333 Query: 285 FGAQSSGNPHQHLPVGFSYGHSVPAAVQVKPAEQKQPAGE 404 A +G PHQ LP GFSY H VP VQVKPAE+KQPAGE Sbjct: 334 AAAHPAGKPHQILPAGFSYVHPVPTVVQVKPAEKKQPAGE 373 >ref|XP_002311616.1| predicted protein [Populus trichocarpa] gi|222851436|gb|EEE88983.1| predicted protein [Populus trichocarpa] Length = 1518 Score = 112 bits (279), Expect = 4e-23 Identities = 59/100 (59%), Positives = 65/100 (65%) Frame = +3 Query: 105 GTTVSSSTGMLSLCTPVTLSSTSTTDPXXXXXXXXXXXXXXXSNMKGGGLSSQGTLHAAQ 284 G +SSTGML+LC PVTL++TSTTDP +NMKGGGL QG +HA Sbjct: 1426 GAPATSSTGMLNLCHPVTLANTSTTDPAKAVAAAS-------NNMKGGGLPPQGLIHAQF 1478 Query: 285 FGAQSSGNPHQHLPVGFSYGHSVPAAVQVKPAEQKQPAGE 404 Q SG PHQ LP GF Y H VP AVQVKPAEQKQPAGE Sbjct: 1479 AAVQPSGKPHQILPAGFHYVHPVPTAVQVKPAEQKQPAGE 1518 >ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera] Length = 1587 Score = 107 bits (266), Expect = 1e-21 Identities = 62/119 (52%), Positives = 72/119 (60%), Gaps = 1/119 (0%) Frame = +3 Query: 48 GYYXXXXXXXXXXXXXXXXGTTVSSSTGMLSLCTPVTLSSTSTTDPXXXXXXXXXXXXXX 227 GYY G++ +SSTGML+LC PVTL+S ST+DP Sbjct: 1466 GYYLQRRRSEQHPLQQQPQGSSGTSSTGMLTLCPPVTLASASTSDPARAIAA-------- 1517 Query: 228 XSNMKGGGLSSQGTLHAAQFGA-QSSGNPHQHLPVGFSYGHSVPAAVQVKPAEQKQPAG 401 SNMKGGGL SQG +HAAQ+ A QS GNPH + F Y H+VP AVQVKPAEQKQPAG Sbjct: 1518 -SNMKGGGLPSQG-IHAAQYAAAQSPGNPHSLMHASFPYVHAVPTAVQVKPAEQKQPAG 1574 >ref|XP_004170713.1| PREDICTED: protein TIME FOR COFFEE-like, partial [Cucumis sativus] Length = 979 Score = 95.1 bits (235), Expect = 5e-18 Identities = 58/101 (57%), Positives = 65/101 (64%), Gaps = 2/101 (1%) Frame = +3 Query: 105 GTTVSSSTGMLSLCTPVTLSSTSTTDPXXXXXXXXXXXXXXXSNMK-GGGLSSQGTLHAA 281 G+ +SS GMLSLC PVTL +STTDP +NMK GGGL +Q LH A Sbjct: 884 GSGGTSSNGMLSLCHPVTLGGSSTTDP----AKAVAAAAAAANNMKGGGGLPTQAILHPA 939 Query: 282 QF-GAQSSGNPHQHLPVGFSYGHSVPAAVQVKPAEQKQPAG 401 QF AQSSGNPHQ +P GF Y H+ AAVQVK EQKQPAG Sbjct: 940 QFAAAQSSGNPHQLVPAGFPYVHT--AAVQVKSTEQKQPAG 978 >ref|XP_004140148.1| PREDICTED: protein TIME FOR COFFEE-like [Cucumis sativus] Length = 1560 Score = 95.1 bits (235), Expect = 5e-18 Identities = 58/101 (57%), Positives = 65/101 (64%), Gaps = 2/101 (1%) Frame = +3 Query: 105 GTTVSSSTGMLSLCTPVTLSSTSTTDPXXXXXXXXXXXXXXXSNMK-GGGLSSQGTLHAA 281 G+ +SS GMLSLC PVTL +STTDP +NMK GGGL +Q LH A Sbjct: 1465 GSGGTSSNGMLSLCHPVTLGGSSTTDP----AKAVAAAAAAANNMKGGGGLPTQAILHPA 1520 Query: 282 QF-GAQSSGNPHQHLPVGFSYGHSVPAAVQVKPAEQKQPAG 401 QF AQSSGNPHQ +P GF Y H+ AAVQVK EQKQPAG Sbjct: 1521 QFAAAQSSGNPHQLVPAGFPYVHT--AAVQVKSTEQKQPAG 1559