BLASTX nr result

ID: Panax21_contig00004429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004429
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509814.1| Minor histocompatibility antigen H13, putati...   235   e-113
ref|XP_002274996.2| PREDICTED: signal peptide peptidase-like 2B-...   231   e-112
ref|XP_002303595.1| predicted protein [Populus trichocarpa] gi|2...   231   e-112
gb|AAL14629.1|AF417576_1 growth-on protein GRO10 [Euphorbia esula]    228   e-111
ref|XP_002299526.1| predicted protein [Populus trichocarpa] gi|2...   228   e-109

>ref|XP_002509814.1| Minor histocompatibility antigen H13, putative [Ricinus communis]
           gi|223549713|gb|EEF51201.1| Minor histocompatibility
           antigen H13, putative [Ricinus communis]
          Length = 542

 Score =  235 bits (599), Expect(2) = e-113
 Identities = 119/152 (78%), Positives = 122/152 (80%)
 Frame = -3

Query: 458 ESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGGFSIIGFGDILLPGLLIAFSLRYDWLAK 279
           ESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGG+SIIGFGDILLPGLLIAFSLRYDWLA 
Sbjct: 397 ESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGGYSIIGFGDILLPGLLIAFSLRYDWLAN 456

Query: 278 KTFRAGYFXXXXXXXXXXXXXXXXXXXXXXXXXXWAMFAYGLGLLITYVALNLMDGHGQP 99
           K+ RAGYF                          WAM AYGLGLLITYVALNLMDGHGQP
Sbjct: 457 KSLRAGYF-------------------------LWAMIAYGLGLLITYVALNLMDGHGQP 491

Query: 98  ALLYIVPFTLGTFLTLGKKRGDLKILWTRGEP 3
           ALLYIVPFTLGTFLTLGKKRGDL +LWTRGEP
Sbjct: 492 ALLYIVPFTLGTFLTLGKKRGDLYVLWTRGEP 523



 Score =  201 bits (511), Expect(2) = e-113
 Identities = 102/135 (75%), Positives = 111/135 (82%)
 Frame = -1

Query: 952 FCIGGIEGLQTCLVALLSRWFKSSGQSFIKVPFFGAVSYLTLAVSPFCIAFAXXXXXXXX 773
           FCIGG+EGLQTCLVALLSRWFK +G+S+IK+PFFGA+SYLTLAVSPFC+AFA        
Sbjct: 283 FCIGGVEGLQTCLVALLSRWFKHAGESYIKIPFFGALSYLTLAVSPFCLAFA-------- 334

Query: 772 XXXXXXXXXXXXXVVWAVYRTTVSFAWIGQDILGIALIVTVLQIVHVPNLKVGTVLLSCA 593
                        VVWAVYR  VSF+WIGQDILGIALI+TVLQIVHVPNLKVGTVLLSCA
Sbjct: 335 -------------VVWAVYRN-VSFSWIGQDILGIALIITVLQIVHVPNLKVGTVLLSCA 380

Query: 592 FLYDIFWVFVSKKLF 548
           FLYDIFWVFVSKKLF
Sbjct: 381 FLYDIFWVFVSKKLF 395


>ref|XP_002274996.2| PREDICTED: signal peptide peptidase-like 2B-like [Vitis vinifera]
           gi|297742511|emb|CBI34660.3| unnamed protein product
           [Vitis vinifera]
          Length = 548

 Score =  231 bits (589), Expect(2) = e-112
 Identities = 117/152 (76%), Positives = 121/152 (79%)
 Frame = -3

Query: 458 ESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGGFSIIGFGDILLPGLLIAFSLRYDWLAK 279
           ESVMIVVARGDRSG+DGIPMLLKIPRMFDPWGG+SIIGFGDILLPGLLIAFSLRYDWLAK
Sbjct: 399 ESVMIVVARGDRSGQDGIPMLLKIPRMFDPWGGYSIIGFGDILLPGLLIAFSLRYDWLAK 458

Query: 278 KTFRAGYFXXXXXXXXXXXXXXXXXXXXXXXXXXWAMFAYGLGLLITYVALNLMDGHGQP 99
           K  + GYF                          WAMFAYGLGLLITYVALNLMDGHGQP
Sbjct: 459 KNIQTGYF-------------------------LWAMFAYGLGLLITYVALNLMDGHGQP 493

Query: 98  ALLYIVPFTLGTFLTLGKKRGDLKILWTRGEP 3
           ALLYIVPFTLGTFLTLG+KRGDLK LWTRG P
Sbjct: 494 ALLYIVPFTLGTFLTLGRKRGDLKNLWTRGVP 525



 Score =  202 bits (514), Expect(2) = e-112
 Identities = 104/135 (77%), Positives = 110/135 (81%)
 Frame = -1

Query: 952 FCIGGIEGLQTCLVALLSRWFKSSGQSFIKVPFFGAVSYLTLAVSPFCIAFAXXXXXXXX 773
           FCIGG+EGLQTCLVALLSRWFK +G++FIKVPFFGAVSYLTLAVSPFCI FA        
Sbjct: 285 FCIGGVEGLQTCLVALLSRWFKRAGEAFIKVPFFGAVSYLTLAVSPFCITFA-------- 336

Query: 772 XXXXXXXXXXXXXVVWAVYRTTVSFAWIGQDILGIALIVTVLQIVHVPNLKVGTVLLSCA 593
                        VVWAVYR  VSFAWIGQDILGIALI+TVLQIVH+PNLKVGTVLLSCA
Sbjct: 337 -------------VVWAVYRD-VSFAWIGQDILGIALIITVLQIVHIPNLKVGTVLLSCA 382

Query: 592 FLYDIFWVFVSKKLF 548
           FLYDIFWVFVSKKLF
Sbjct: 383 FLYDIFWVFVSKKLF 397


>ref|XP_002303595.1| predicted protein [Populus trichocarpa] gi|222841027|gb|EEE78574.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  231 bits (589), Expect(2) = e-112
 Identities = 115/152 (75%), Positives = 122/152 (80%)
 Frame = -3

Query: 458 ESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGGFSIIGFGDILLPGLLIAFSLRYDWLAK 279
           ESVMIVVARGDRSGEDGIPMLLKIPR+FDPWGG+SIIGFGDILLPGLLIAFSLRYDWLA 
Sbjct: 399 ESVMIVVARGDRSGEDGIPMLLKIPRLFDPWGGYSIIGFGDILLPGLLIAFSLRYDWLAT 458

Query: 278 KTFRAGYFXXXXXXXXXXXXXXXXXXXXXXXXXXWAMFAYGLGLLITYVALNLMDGHGQP 99
           K+ RAGYF                          WAM AYGLGLL+TYVALNLMDGHGQP
Sbjct: 459 KSLRAGYF-------------------------PWAMLAYGLGLLVTYVALNLMDGHGQP 493

Query: 98  ALLYIVPFTLGTFLTLGKKRGDLKILWTRGEP 3
           ALLYIVPFTLGTFL LGKKRGDL++LWT+GEP
Sbjct: 494 ALLYIVPFTLGTFLALGKKRGDLRVLWTQGEP 525



 Score =  201 bits (511), Expect(2) = e-112
 Identities = 103/135 (76%), Positives = 111/135 (82%)
 Frame = -1

Query: 952 FCIGGIEGLQTCLVALLSRWFKSSGQSFIKVPFFGAVSYLTLAVSPFCIAFAXXXXXXXX 773
           FCIGG+EGLQTCLVALLSRWFK +G+S+IKVPFFG +SYLTLAV+PFCIAFA        
Sbjct: 285 FCIGGVEGLQTCLVALLSRWFKHAGESYIKVPFFGPLSYLTLAVAPFCIAFA-------- 336

Query: 772 XXXXXXXXXXXXXVVWAVYRTTVSFAWIGQDILGIALIVTVLQIVHVPNLKVGTVLLSCA 593
                        VVWAVYRT VSFAWIGQDILGIALI+TVLQIVHVPNLKVGTVLLSCA
Sbjct: 337 -------------VVWAVYRT-VSFAWIGQDILGIALIITVLQIVHVPNLKVGTVLLSCA 382

Query: 592 FLYDIFWVFVSKKLF 548
           FLYDIFWVFVSKK+F
Sbjct: 383 FLYDIFWVFVSKKVF 397


>gb|AAL14629.1|AF417576_1 growth-on protein GRO10 [Euphorbia esula]
          Length = 537

 Score =  228 bits (581), Expect(2) = e-111
 Identities = 115/152 (75%), Positives = 119/152 (78%)
 Frame = -3

Query: 458 ESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGGFSIIGFGDILLPGLLIAFSLRYDWLAK 279
           ESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGG+SIIGFGDILLPGLLIAF+LRYDWLA 
Sbjct: 396 ESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGGYSIIGFGDILLPGLLIAFALRYDWLAN 455

Query: 278 KTFRAGYFXXXXXXXXXXXXXXXXXXXXXXXXXXWAMFAYGLGLLITYVALNLMDGHGQP 99
           K+ RAGYF                          WAM AYGLGLLITYVALNLMDGH QP
Sbjct: 456 KSLRAGYF-------------------------LWAMIAYGLGLLITYVALNLMDGHDQP 490

Query: 98  ALLYIVPFTLGTFLTLGKKRGDLKILWTRGEP 3
           ALLYIVPFTLGTFL LGKK GDL +LWTRGEP
Sbjct: 491 ALLYIVPFTLGTFLALGKKNGDLNVLWTRGEP 522



 Score =  199 bits (507), Expect(2) = e-111
 Identities = 102/135 (75%), Positives = 110/135 (81%)
 Frame = -1

Query: 952 FCIGGIEGLQTCLVALLSRWFKSSGQSFIKVPFFGAVSYLTLAVSPFCIAFAXXXXXXXX 773
           FCIGG+EGLQTCLVALLSRWFK +G+S++KVPFFGA+S+LTLAVSPFCI FA        
Sbjct: 282 FCIGGVEGLQTCLVALLSRWFKHAGESYVKVPFFGALSHLTLAVSPFCITFA-------- 333

Query: 772 XXXXXXXXXXXXXVVWAVYRTTVSFAWIGQDILGIALIVTVLQIVHVPNLKVGTVLLSCA 593
                        VVWAVYR  VSFAWIGQDILGIALI+TVLQIVHVPNLKVGTVLLSCA
Sbjct: 334 -------------VVWAVYRN-VSFAWIGQDILGIALIITVLQIVHVPNLKVGTVLLSCA 379

Query: 592 FLYDIFWVFVSKKLF 548
           FLYDIFWVFVSKKLF
Sbjct: 380 FLYDIFWVFVSKKLF 394


>ref|XP_002299526.1| predicted protein [Populus trichocarpa] gi|222846784|gb|EEE84331.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  228 bits (581), Expect(2) = e-109
 Identities = 114/152 (75%), Positives = 121/152 (79%)
 Frame = -3

Query: 458 ESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGGFSIIGFGDILLPGLLIAFSLRYDWLAK 279
           ESVMIVVARGDRSGEDGIPMLLKIPR+FDPWGG+SIIGFGDILLPGLLIAFSLRYDW A 
Sbjct: 399 ESVMIVVARGDRSGEDGIPMLLKIPRLFDPWGGYSIIGFGDILLPGLLIAFSLRYDWSAN 458

Query: 278 KTFRAGYFXXXXXXXXXXXXXXXXXXXXXXXXXXWAMFAYGLGLLITYVALNLMDGHGQP 99
           K+  AGYF                          WAM AYGLGLL+TYVALNLMDGHGQP
Sbjct: 459 KSLCAGYF-------------------------PWAMLAYGLGLLVTYVALNLMDGHGQP 493

Query: 98  ALLYIVPFTLGTFLTLGKKRGDLKILWTRGEP 3
           ALLYIVPFTLGTFLTLGKKRGDL++LWT+GEP
Sbjct: 494 ALLYIVPFTLGTFLTLGKKRGDLRVLWTQGEP 525



 Score =  193 bits (491), Expect(2) = e-109
 Identities = 99/135 (73%), Positives = 108/135 (80%)
 Frame = -1

Query: 952 FCIGGIEGLQTCLVALLSRWFKSSGQSFIKVPFFGAVSYLTLAVSPFCIAFAXXXXXXXX 773
           FCIGG+EGLQTCLVALLSRWFK +G+S+IKVPFFGA+SYLTLAVSPFCIAFA        
Sbjct: 285 FCIGGVEGLQTCLVALLSRWFKHAGESYIKVPFFGALSYLTLAVSPFCIAFAAG------ 338

Query: 772 XXXXXXXXXXXXXVVWAVYRTTVSFAWIGQDILGIALIVTVLQIVHVPNLKVGTVLLSCA 593
                          WA++R  +SFAWIGQD LGIALI+TVLQIVHVPNLKVGTVLLSCA
Sbjct: 339 ---------------WAMHRN-LSFAWIGQDTLGIALIITVLQIVHVPNLKVGTVLLSCA 382

Query: 592 FLYDIFWVFVSKKLF 548
           FLYDIFWVFVSKKLF
Sbjct: 383 FLYDIFWVFVSKKLF 397


Top