BLASTX nr result

ID: Panax21_contig00004422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004422
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containin...   259   5e-67
emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]   256   4e-66
ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containin...   247   2e-63
ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containin...   243   4e-62
gb|ACU23866.1| unknown [Glycine max]                                  241   1e-61

>ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Vitis vinifera]
          Length = 388

 Score =  259 bits (662), Expect = 5e-67
 Identities = 140/235 (59%), Positives = 157/235 (66%), Gaps = 22/235 (9%)
 Frame = -3

Query: 784 FAHGVFECWLHPARYRTQPCKDGQNCRRRVCFFAHTQDQIRVL---SPRAVGPGDSYDGS 614
           FAHGVFECWLHPARYRTQPCKDG NCRRRVCFFAHT +Q+RVL   SPR  G  +SYDGS
Sbjct: 160 FAHGVFECWLHPARYRTQPCKDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYDGS 219

Query: 613 PRRLCFEGSCS------------------PTESPPLSPMANXXXXXXXXXXXXXXXXXLR 488
           P R   E SC+                  P ESPP+SP+ +                 LR
Sbjct: 220 PLRQALEASCAKTLPFMSSPGSVSPPGSPPPESPPMSPITSSLSRSLGSNSINEMVASLR 279

Query: 487 QLQLNKVKSMPTSWALQMG-PSGFGSPRSIMTRHGFCSLPSTPTRTVSRPGTGFMDHWDK 311
           QLQL+KVKS P+SW + MG P GFGSPR+ + R GFCSLPSTPTR   R G GF+D +  
Sbjct: 280 QLQLSKVKSAPSSWCVHMGSPGGFGSPRASIIRPGFCSLPSTPTRAPKRHGLGFVDLF-- 337

Query: 310 AGLEEEPVMERVESGRDLRAKMFEKLSKENPLDWVDPNFSDSPNPDVGWVSELIK 146
              EEEP MERVESGRDLRAKMFEKLSKEN LD  DP+ S +  PDVGWVSEL+K
Sbjct: 338 ---EEEPAMERVESGRDLRAKMFEKLSKENSLDRPDPSASGA-GPDVGWVSELVK 388


>emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]
          Length = 460

 Score =  256 bits (654), Expect = 4e-66
 Identities = 139/233 (59%), Positives = 155/233 (66%), Gaps = 22/233 (9%)
 Frame = -3

Query: 784 FAHGVFECWLHPARYRTQPCKDGQNCRRRVCFFAHTQDQIRVL---SPRAVGPGDSYDGS 614
           FAHGVFECWLHPARYRTQPCKDG NCRRRVCFFAHT +Q+RVL   SPR  G  +SYDGS
Sbjct: 200 FAHGVFECWLHPARYRTQPCKDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYDGS 259

Query: 613 PRRLCFEGSCS------------------PTESPPLSPMANXXXXXXXXXXXXXXXXXLR 488
           P R   E SC+                  P ESPP+SP+ +                 LR
Sbjct: 260 PLRQALEASCAKTLPFMSSPGSVSPPGSPPPESPPMSPITSSLSRSLGSNSINEMVASLR 319

Query: 487 QLQLNKVKSMPTSWALQMG-PSGFGSPRSIMTRHGFCSLPSTPTRTVSRPGTGFMDHWDK 311
           QLQL+KVKS P+SW + MG P GFGSPR+ + R GFCSLPSTPTR   R G GF+D +  
Sbjct: 320 QLQLSKVKSAPSSWCVHMGSPGGFGSPRASIIRPGFCSLPSTPTRAPKRHGLGFVDLF-- 377

Query: 310 AGLEEEPVMERVESGRDLRAKMFEKLSKENPLDWVDPNFSDSPNPDVGWVSEL 152
              EEEP MERVESGRDLRAKMFEKLSKEN LD  DP+ S +  PDVGWVSEL
Sbjct: 378 ---EEEPAMERVESGRDLRAKMFEKLSKENSLDRPDPSASGA-GPDVGWVSEL 426


>ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 353

 Score =  247 bits (630), Expect = 2e-63
 Identities = 130/226 (57%), Positives = 148/226 (65%), Gaps = 14/226 (6%)
 Frame = -3

Query: 784 FAHGVFECWLHPARYRTQPCKDGQNCRRRVCFFAHTQDQIRVLSPRAVGPGDSYDGSPRR 605
           +AHGVFECWLHPARYRTQPCKDG +CRRRVCFFAHT DQ+RVL  ++    DSYDGSP R
Sbjct: 136 YAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPDQLRVLPQQSPRSADSYDGSPLR 195

Query: 604 LCFEGSC--------------SPTESPPLSPMANXXXXXXXXXXXXXXXXXLRQLQLNKV 467
              E SC              SP ESPP+SPM                   LR LQL KV
Sbjct: 196 HAIESSCAKSHPFVASPGSASSPVESPPMSPMT---------VSVNEMVASLRNLQLGKV 246

Query: 466 KSMPTSWALQMGPSGFGSPRSIMTRHGFCSLPSTPTRTVSRPGTGFMDHWDKAGLEEEPV 287
           KS+P+SW + MG SGFGSPR  M R GF SLP+TPT+  +R G  + D WD++  EEEPV
Sbjct: 247 KSLPSSWNV-MGSSGFGSPRGPMIRPGFFSLPTTPTQAPTRGGVNYFDQWDQSCCEEEPV 305

Query: 286 MERVESGRDLRAKMFEKLSKENPLDWVDPNFSDSPNPDVGWVSELI 149
           MERVESGR +RA+MFEKLSKEN LD      S    PDVGWVSEL+
Sbjct: 306 MERVESGRSIRARMFEKLSKENHLDGSGSGSSQIGVPDVGWVSELV 351


>ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 355

 Score =  243 bits (619), Expect = 4e-62
 Identities = 128/229 (55%), Positives = 150/229 (65%), Gaps = 17/229 (7%)
 Frame = -3

Query: 784 FAHGVFECWLHPARYRTQPCKDGQNCRRRVCFFAHTQDQIRVLSPRAVGPGDSYDGSPRR 605
           +AHGVFECWLHPARYRTQPCKDG +CRRRVCFFAHT +Q+RVL  ++    DSYDGSP R
Sbjct: 136 YAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSADSYDGSPLR 195

Query: 604 LCFEGSCS-----------------PTESPPLSPMANXXXXXXXXXXXXXXXXXLRQLQL 476
              E SC+                 P ESPP+SPM                   LR LQL
Sbjct: 196 HAIESSCAKTLAPAPFVSSPGSVSPPLESPPMSPMT---------VSVNEMVASLRNLQL 246

Query: 475 NKVKSMPTSWALQMGPSGFGSPRSIMTRHGFCSLPSTPTRTVSRPGTGFMDHWDKAGLEE 296
            KVKS+P+SW + MGPSGFGSPR  M R GF SLP+TPT+  +R G  + D WD++  EE
Sbjct: 247 GKVKSLPSSWNV-MGPSGFGSPRGPMIRPGFFSLPTTPTQAPTRGGVNYFDKWDQS-CEE 304

Query: 295 EPVMERVESGRDLRAKMFEKLSKENPLDWVDPNFSDSPNPDVGWVSELI 149
           EPVMERVESGR++RA+MF KLSKEN LD  D       +PDVGWVSEL+
Sbjct: 305 EPVMERVESGRNIRARMFAKLSKENHLDGSDSGSGQIGDPDVGWVSELV 353


>gb|ACU23866.1| unknown [Glycine max]
          Length = 355

 Score =  241 bits (616), Expect = 1e-61
 Identities = 128/229 (55%), Positives = 150/229 (65%), Gaps = 17/229 (7%)
 Frame = -3

Query: 784 FAHGVFECWLHPARYRTQPCKDGQNCRRRVCFFAHTQDQIRVLSPRAVGPGDSYDGSPRR 605
           +AHGVFECWLHPARYRTQPCKDG +CRRRVCFFAHT +Q+RVL  ++    DSYDGSP R
Sbjct: 136 YAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSADSYDGSPLR 195

Query: 604 LCFEGSCS-----------------PTESPPLSPMANXXXXXXXXXXXXXXXXXLRQLQL 476
              E SC+                 P ESPP+SPM                   LR LQL
Sbjct: 196 HAIESSCAKTLAPAPFVSSPGSVSPPLESPPMSPMT---------VSVNEMVASLRNLQL 246

Query: 475 NKVKSMPTSWALQMGPSGFGSPRSIMTRHGFCSLPSTPTRTVSRPGTGFMDHWDKAGLEE 296
            KVKS+P+SW + MGPSGFGSPR  M R GF SLP+TPT+  +R G  + D WD++  EE
Sbjct: 247 GKVKSLPSSWNV-MGPSGFGSPRGPMIRPGFFSLPTTPTQAPTRGGVNYFDKWDQS-CEE 304

Query: 295 EPVMERVESGRDLRAKMFEKLSKENPLDWVDPNFSDSPNPDVGWVSELI 149
           EPVMERVESGR++RA+MF KLSKEN LD  D       +PDVGWVSEL+
Sbjct: 305 EPVMERVESGRNIRARMFAKLSKENHLDGSDFGSGQIGDPDVGWVSELV 353


Top