BLASTX nr result

ID: Panax21_contig00004417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004417
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB87132.1| translocon-associated protein beta family protein...   233   6e-59
ref|XP_002274525.1| PREDICTED: translocon-associated protein sub...   232   8e-59
ref|NP_001238351.1| uncharacterized protein LOC100306406 precurs...   224   2e-56
ref|XP_002274610.2| PREDICTED: translocon-associated protein sub...   224   3e-56
ref|XP_002512872.1| translocon-associated protein, beta subunit ...   224   3e-56

>gb|ABB87132.1| translocon-associated protein beta family protein-like [Solanum
           tuberosum]
          Length = 192

 Score =  233 bits (593), Expect = 6e-59
 Identities = 108/137 (78%), Positives = 126/137 (91%)
 Frame = -2

Query: 742 DGPFILAHKKATLNRLKSGAERISVSIDIYNQGSATAYDVSLIDDSWSQDYFDIISGNKT 563
           DGPFI+AHKKA L RLKS  ERIS+SIDIYN+GSATAYDVSL DD+WSQD F+I++GN +
Sbjct: 27  DGPFIVAHKKAALTRLKSDIERISISIDIYNEGSATAYDVSLYDDNWSQDVFEIVAGNTS 86

Query: 562 TSWERLDAGALLSHSFELESKVKTIFYGAPAVIKFRVPTKASLQEAYSTPLLPIDLLADR 383
            SWERLDAGA LSHSFELE+K KT+FYGAPAVI FR+PTKA+LQEA+STP+LP+D+LADR
Sbjct: 87  MSWERLDAGASLSHSFELEAKKKTVFYGAPAVITFRIPTKAALQEAFSTPILPLDILADR 146

Query: 382 PPEKKFDWAKRLLAKYG 332
           PPEKKFDWAK+L+AKYG
Sbjct: 147 PPEKKFDWAKKLMAKYG 163


>ref|XP_002274525.1| PREDICTED: translocon-associated protein subunit beta isoform 1
           [Vitis vinifera]
          Length = 191

 Score =  232 bits (592), Expect = 8e-59
 Identities = 111/137 (81%), Positives = 126/137 (91%)
 Frame = -2

Query: 742 DGPFILAHKKATLNRLKSGAERISVSIDIYNQGSATAYDVSLIDDSWSQDYFDIISGNKT 563
           D PFI+AHKKA+L RLKSGAER+SVSIDIYNQGS TAYDVSL DDSWSQD F+I+SGN +
Sbjct: 23  DVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAYDVSLTDDSWSQDVFNIVSGNTS 82

Query: 562 TSWERLDAGALLSHSFELESKVKTIFYGAPAVIKFRVPTKASLQEAYSTPLLPIDLLADR 383
           TSWERLDAG LLSH+FELESKV+ +FYGAPAVI FR+PT A+LQEAYSTP+LP+D+LA R
Sbjct: 83  TSWERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIPTTAALQEAYSTPILPLDILAVR 142

Query: 382 PPEKKFDWAKRLLAKYG 332
           PPEKKF+WAKRLLAKYG
Sbjct: 143 PPEKKFEWAKRLLAKYG 159


>ref|NP_001238351.1| uncharacterized protein LOC100306406 precursor [Glycine max]
           gi|255628433|gb|ACU14561.1| unknown [Glycine max]
          Length = 194

 Score =  224 bits (572), Expect = 2e-56
 Identities = 105/137 (76%), Positives = 125/137 (91%)
 Frame = -2

Query: 742 DGPFILAHKKATLNRLKSGAERISVSIDIYNQGSATAYDVSLIDDSWSQDYFDIISGNKT 563
           D PFI+AHKKA+LNRLKSGAER+SV+IDIYNQG++TAYDVSL DDSW  D FD+ISG+ +
Sbjct: 27  DVPFIVAHKKASLNRLKSGAERVSVTIDIYNQGTSTAYDVSLSDDSWPSDAFDVISGSTS 86

Query: 562 TSWERLDAGALLSHSFELESKVKTIFYGAPAVIKFRVPTKASLQEAYSTPLLPIDLLADR 383
            SWERLDAG ++SH+FELE+K K +F G PAVIKFRVPTKA+LQEAYSTP+LP+D+L+DR
Sbjct: 87  KSWERLDAGGIISHTFELEAKSKGVFAGEPAVIKFRVPTKAALQEAYSTPILPLDVLSDR 146

Query: 382 PPEKKFDWAKRLLAKYG 332
           PPEKKF+WAKRLLAKYG
Sbjct: 147 PPEKKFEWAKRLLAKYG 163


>ref|XP_002274610.2| PREDICTED: translocon-associated protein subunit beta isoform 2
           [Vitis vinifera]
          Length = 189

 Score =  224 bits (570), Expect = 3e-56
 Identities = 109/137 (79%), Positives = 124/137 (90%)
 Frame = -2

Query: 742 DGPFILAHKKATLNRLKSGAERISVSIDIYNQGSATAYDVSLIDDSWSQDYFDIISGNKT 563
           D PFI+AHKKA+L RLKSGAER+SVSIDIYNQGS TAYDVSL DDSWSQD F+I+SGN +
Sbjct: 23  DVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAYDVSLTDDSWSQDVFNIVSGNTS 82

Query: 562 TSWERLDAGALLSHSFELESKVKTIFYGAPAVIKFRVPTKASLQEAYSTPLLPIDLLADR 383
           TSWERLDAG LLSH+FELESKV+ +FYGAPAVI FR+PT A+LQEAYSTP+LP+D+LA R
Sbjct: 83  TSWERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIPTTAALQEAYSTPILPLDILAVR 142

Query: 382 PPEKKFDWAKRLLAKYG 332
           PPEKKF+W  RLLAKYG
Sbjct: 143 PPEKKFEW--RLLAKYG 157


>ref|XP_002512872.1| translocon-associated protein, beta subunit precursor, putative
           [Ricinus communis] gi|223547883|gb|EEF49375.1|
           translocon-associated protein, beta subunit precursor,
           putative [Ricinus communis]
          Length = 208

 Score =  224 bits (570), Expect = 3e-56
 Identities = 105/137 (76%), Positives = 124/137 (90%)
 Frame = -2

Query: 742 DGPFILAHKKATLNRLKSGAERISVSIDIYNQGSATAYDVSLIDDSWSQDYFDIISGNKT 563
           D PFI+AHKKATLNRLKSGAER+SVSIDIYNQGS+TAYDVSL+DD W QD FD+ISGN +
Sbjct: 24  DVPFIVAHKKATLNRLKSGAERVSVSIDIYNQGSSTAYDVSLLDDHWPQDIFDVISGNTS 83

Query: 562 TSWERLDAGALLSHSFELESKVKTIFYGAPAVIKFRVPTKASLQEAYSTPLLPIDLLADR 383
            SWERLD G +LSH+FELE KVK +FYG+PAV+ FR+PTKA+LQEA+STP+LP+D+LA+R
Sbjct: 84  QSWERLDVGGILSHTFELEGKVKGLFYGSPAVVTFRIPTKAALQEAFSTPILPLDVLAER 143

Query: 382 PPEKKFDWAKRLLAKYG 332
           PPEKKF+W  RLLAKYG
Sbjct: 144 PPEKKFEW--RLLAKYG 158


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