BLASTX nr result

ID: Panax21_contig00004339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004339
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633251.1| PREDICTED: GTP-binding protein TypA/BipA hom...   218   4e-55
ref|XP_002278771.1| PREDICTED: GTP-binding protein TypA/BipA hom...   218   4e-55
ref|XP_002525152.1| GTP-binding protein typa/bipa, putative [Ric...   204   5e-51
ref|XP_003527397.1| PREDICTED: GTP-binding protein TypA/BipA hom...   202   3e-50
ref|XP_003539953.1| PREDICTED: GTP-binding protein TypA/BipA hom...   201   7e-50

>ref|XP_003633251.1| PREDICTED: GTP-binding protein TypA/BipA homolog isoform 2 [Vitis
           vinifera]
          Length = 684

 Score =  218 bits (555), Expect = 4e-55
 Identities = 108/120 (90%), Positives = 114/120 (95%)
 Frame = -3

Query: 361 VLVSMGRGAITGYALLSLEPRGTLFVTPGMETYDGMIVGEHSRDTDLDVNPVRNKELTNI 182
           VLVSMG G IT YAL+SLEPRGTLFVTPGMETYDGMIVGEHSRDTDLD+NPVR KELTNI
Sbjct: 565 VLVSMGHGTITAYALVSLEPRGTLFVTPGMETYDGMIVGEHSRDTDLDINPVRAKELTNI 624

Query: 181 RAASKDENVKLSPPRLLTLEEAIGYVASDELIEVTPKAIRLRKRYLDANKRKQTRNKPKE 2
           RAASKDENVKL+PPRL+TLEEAIGYVASDELIEVTPKAIRLRK+YLDANKRK  RNKPK+
Sbjct: 625 RAASKDENVKLTPPRLMTLEEAIGYVASDELIEVTPKAIRLRKKYLDANKRKMMRNKPKD 684


>ref|XP_002278771.1| PREDICTED: GTP-binding protein TypA/BipA homolog isoform 1 [Vitis
           vinifera] gi|302143376|emb|CBI21937.3| unnamed protein
           product [Vitis vinifera]
          Length = 672

 Score =  218 bits (555), Expect = 4e-55
 Identities = 108/120 (90%), Positives = 114/120 (95%)
 Frame = -3

Query: 361 VLVSMGRGAITGYALLSLEPRGTLFVTPGMETYDGMIVGEHSRDTDLDVNPVRNKELTNI 182
           VLVSMG G IT YAL+SLEPRGTLFVTPGMETYDGMIVGEHSRDTDLD+NPVR KELTNI
Sbjct: 553 VLVSMGHGTITAYALVSLEPRGTLFVTPGMETYDGMIVGEHSRDTDLDINPVRAKELTNI 612

Query: 181 RAASKDENVKLSPPRLLTLEEAIGYVASDELIEVTPKAIRLRKRYLDANKRKQTRNKPKE 2
           RAASKDENVKL+PPRL+TLEEAIGYVASDELIEVTPKAIRLRK+YLDANKRK  RNKPK+
Sbjct: 613 RAASKDENVKLTPPRLMTLEEAIGYVASDELIEVTPKAIRLRKKYLDANKRKMMRNKPKD 672


>ref|XP_002525152.1| GTP-binding protein typa/bipa, putative [Ricinus communis]
           gi|223535611|gb|EEF37279.1| GTP-binding protein
           typa/bipa, putative [Ricinus communis]
          Length = 661

 Score =  204 bits (520), Expect = 5e-51
 Identities = 101/120 (84%), Positives = 112/120 (93%)
 Frame = -3

Query: 361 VLVSMGRGAITGYALLSLEPRGTLFVTPGMETYDGMIVGEHSRDTDLDVNPVRNKELTNI 182
           VLVS+G GAIT +AL+SLE RGTLFVTPGMETYDGMIVGEHSRD+DLD+NPVR+KELTN+
Sbjct: 542 VLVSVGYGAITAHALMSLEARGTLFVTPGMETYDGMIVGEHSRDSDLDINPVRSKELTNV 601

Query: 181 RAASKDENVKLSPPRLLTLEEAIGYVASDELIEVTPKAIRLRKRYLDANKRKQTRNKPKE 2
           RAASKDENV+LSPPRL+TLEEAIGYVASDELIEVTPKAIRLRKR+LD NKRK    +PKE
Sbjct: 602 RAASKDENVRLSPPRLMTLEEAIGYVASDELIEVTPKAIRLRKRHLDVNKRKAMSKRPKE 661


>ref|XP_003527397.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Glycine max]
          Length = 670

 Score =  202 bits (513), Expect = 3e-50
 Identities = 101/120 (84%), Positives = 109/120 (90%)
 Frame = -3

Query: 361 VLVSMGRGAITGYALLSLEPRGTLFVTPGMETYDGMIVGEHSRDTDLDVNPVRNKELTNI 182
           VLVSMG G IT +AL+SLE RGTLFVTPGME YDGMIVGEHSRDTDLDVNPVR KELTNI
Sbjct: 551 VLVSMGFGTITAHALMSLEARGTLFVTPGMEAYDGMIVGEHSRDTDLDVNPVRAKELTNI 610

Query: 181 RAASKDENVKLSPPRLLTLEEAIGYVASDELIEVTPKAIRLRKRYLDANKRKQTRNKPKE 2
           RAA+KD+NVKL+PPRL+TLEEAIGYVASDELIEVTPK+IRLRK+YLD NKRK    KPKE
Sbjct: 611 RAATKDDNVKLTPPRLMTLEEAIGYVASDELIEVTPKSIRLRKKYLDVNKRKAMSKKPKE 670


>ref|XP_003539953.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Glycine max]
          Length = 670

 Score =  201 bits (510), Expect = 7e-50
 Identities = 100/120 (83%), Positives = 109/120 (90%)
 Frame = -3

Query: 361 VLVSMGRGAITGYALLSLEPRGTLFVTPGMETYDGMIVGEHSRDTDLDVNPVRNKELTNI 182
           VLVSMG G IT +AL+SLE RGTLFVTPGME YDGMIVGEHSRDTDLDVNPVR KELTNI
Sbjct: 551 VLVSMGFGTITAHALMSLEARGTLFVTPGMEAYDGMIVGEHSRDTDLDVNPVRAKELTNI 610

Query: 181 RAASKDENVKLSPPRLLTLEEAIGYVASDELIEVTPKAIRLRKRYLDANKRKQTRNKPKE 2
           RAA+KD+NVKL+PPRL+TLEEAIGYVASDELIEVTPK+IRLRK+YLD NKRK    +PKE
Sbjct: 611 RAATKDDNVKLTPPRLMTLEEAIGYVASDELIEVTPKSIRLRKKYLDVNKRKAMSKRPKE 670


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